RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 HIST1H2BDP58876 126 aa3.14□□□□□ -1.91
CAPRIN1-208ENST00000530008 VBP1P61758 197 aa3.14□□□□□ -1.91
CAPRIN1-208ENST00000530008 HIST1H2BCP62807 126 aa3.14□□□□□ -1.91
CAPRIN1-208ENST00000530008 HIST2H2BEQ16778 126 aa3.14□□□□□ -1.91
CAPRIN1-208ENST00000530008 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.14□□□□□ -1.91
CAPRIN1-208ENST00000530008 AADACL3Q5VUY0 350 aa3.14□□□□□ -1.91
CAPRIN1-208ENST00000530008 AGTRAPQ6RW13 159 aa3.14□□□□□ -1.91
CAPRIN1-208ENST00000530008 BRD3OSQ6XYD6 125 aa3.14□□□□□ -1.91
CAPRIN1-208ENST00000530008 SLC35E3Q7Z769 313 aa3.14□□□□□ -1.91
CAPRIN1-208ENST00000530008 HIST1H2BHQ93079 126 aa3.14□□□□□ -1.91
CAPRIN1-208ENST00000530008 HIST1H2BNQ99877 126 aa3.14□□□□□ -1.91
CAPRIN1-208ENST00000530008 HIST1H2BMQ99879 126 aa3.14□□□□□ -1.91
CAPRIN1-208ENST00000530008 OR8D2Q9GZM6 311 aa3.14□□□□□ -1.91
CAPRIN1-208ENST00000530008 TP73-AS1Q9UF72 201 aa3.14□□□□□ -1.91
CAPRIN1-208ENST00000530008 EIF3AQ14152 1382 aaKnown RBP3.13□□□□□ -1.91
CAPRIN1-208ENST00000530008 ZNF638Q14966 1978 aaKnown RBP3.13□□□□□ -1.91
CAPRIN1-208ENST00000530008 TMEM238C9JI98 176 aa3.13□□□□□ -1.91
CAPRIN1-208ENST00000530008 E5RI56 91 aa3.13□□□□□ -1.91
CAPRIN1-208ENST00000530008 H3BT86 120 aa3.13□□□□□ -1.91
CAPRIN1-208ENST00000530008 IGKV1-5P01602 117 aa3.13□□□□□ -1.91
CAPRIN1-208ENST00000530008 GNG10P50151 68 aa3.13□□□□□ -1.91
CAPRIN1-208ENST00000530008 RPL18Q07020 188 aaKnown RBP3.13□□□□□ -1.91
CAPRIN1-208ENST00000530008 ZNF705AQ6ZN79 300 aaPredicted RBP3.13□□□□□ -1.91
CAPRIN1-208ENST00000530008 OR51T1Q8NGJ9 327 aa3.13□□□□□ -1.91
CAPRIN1-208ENST00000530008 OR13C4Q8NGS5 318 aa3.13□□□□□ -1.91
CAPRIN1-208ENST00000530008 TOMM6Q96B49 74 aa3.13□□□□□ -1.91
CAPRIN1-208ENST00000530008 C20orf27Q9GZN8 174 aa3.13□□□□□ -1.91
CAPRIN1-208ENST00000530008 TIMM22Q9Y584 194 aa3.13□□□□□ -1.91
CAPRIN1-208ENST00000530008 COL4A4P53420 1690 aaPredicted RBP3.13□□□□□ -1.91
CAPRIN1-208ENST00000530008 TRAV9-1A0A075B6T8 112 aa3.12□□□□□ -1.91
CAPRIN1-208ENST00000530008 hCG_1818297A0A087WSY0 165 aa3.12□□□□□ -1.91
CAPRIN1-208ENST00000530008 A8MT66 165 aa3.12□□□□□ -1.91
CAPRIN1-208ENST00000530008 KLRC4O43908 158 aa3.12□□□□□ -1.91
CAPRIN1-208ENST00000530008 CREBL2O60519 120 aaPredicted RBP3.12□□□□□ -1.91
CAPRIN1-208ENST00000530008 ZNF682O95780 498 aa3.12□□□□□ -1.91
CAPRIN1-208ENST00000530008 C1QAP02745 245 aa3.12□□□□□ -1.91
CAPRIN1-208ENST00000530008 LGALS1P09382 135 aaKnown RBP3.12□□□□□ -1.91
CAPRIN1-208ENST00000530008 SMIM10L2AP0DMW4 78 aa3.12□□□□□ -1.91
CAPRIN1-208ENST00000530008 SMIM10L2BP0DMW5 78 aa3.12□□□□□ -1.91
CAPRIN1-208ENST00000530008 G0S2P27469 103 aa3.12□□□□□ -1.91
CAPRIN1-208ENST00000530008 RPL28P46779 137 aaKnown RBP3.12□□□□□ -1.91
CAPRIN1-208ENST00000530008 TPI1P60174 286 aa3.12□□□□□ -1.91
CAPRIN1-208ENST00000530008 HIST1H4AP62805 103 aaKnown RBP3.12□□□□□ -1.91
CAPRIN1-208ENST00000530008 RPL22L1Q6P5R6 122 aaKnown RBP3.12□□□□□ -1.91
CAPRIN1-208ENST00000530008 ZNF767PQ75MW2 155 aa3.12□□□□□ -1.91
CAPRIN1-208ENST00000530008 OR5J2Q8NH18 312 aa3.12□□□□□ -1.91
CAPRIN1-208ENST00000530008 DERL1Q9BUN8 251 aa3.12□□□□□ -1.91
CAPRIN1-208ENST00000530008 CCDC90BQ9GZT6 254 aa3.12□□□□□ -1.91
CAPRIN1-208ENST00000530008 HHLA3Q9XRX5 114 aa3.12□□□□□ -1.91
CAPRIN1-208ENST00000530008 ITGB4P16144 1822 aa3.12□□□□□ -1.91
CAPRIN1-208ENST00000530008 RBP1P09455 135 aa3.11□□□□□ -1.91
CAPRIN1-208ENST00000530008 CBR1P16152 277 aa3.11□□□□□ -1.91
CAPRIN1-208ENST00000530008 MSNP26038 577 aaKnown RBP3.11□□□□□ -1.91
CAPRIN1-208ENST00000530008 RAB14P61106 215 aa3.11□□□□□ -1.91
CAPRIN1-208ENST00000530008 RPL19P84098 196 aaKnown RBP3.11□□□□□ -1.91
CAPRIN1-208ENST00000530008 MEF2BQ02080 365 aaPredicted RBP3.11□□□□□ -1.91
CAPRIN1-208ENST00000530008 KRR1Q13601 381 aaKnown RBP3.11□□□□□ -1.91
CAPRIN1-208ENST00000530008 PABPC1L2AQ5JQF8 200 aa3.11□□□□□ -1.91
CAPRIN1-208ENST00000530008 IBA57Q5T440 356 aaKnown RBP3.11□□□□□ -1.91
CAPRIN1-208ENST00000530008 SLC36A1Q7Z2H8 476 aa3.11□□□□□ -1.91
CAPRIN1-208ENST00000530008 C12orf45Q8N5I9 185 aaPredicted RBP3.11□□□□□ -1.91
CAPRIN1-208ENST00000530008 PRRT1Q99946 306 aa3.11□□□□□ -1.91
CAPRIN1-208ENST00000530008 NAT8Q9UHE5 227 aa3.11□□□□□ -1.91
CAPRIN1-208ENST00000530008 CAMSAP1Q5T5Y3 1602 aa3.11□□□□□ -1.91
CAPRIN1-208ENST00000530008 SLIT2O94813 1529 aa3.1□□□□□ -1.91
CAPRIN1-208ENST00000530008 FABP5P3A8MUU1 101 aa3.1□□□□□ -1.91
CAPRIN1-208ENST00000530008 C3orf84H3BNL1 204 aa3.1□□□□□ -1.91
CAPRIN1-208ENST00000530008 IGHV3-7P01780 117 aa3.1□□□□□ -1.91
CAPRIN1-208ENST00000530008 C8GP07360 202 aa3.1□□□□□ -1.91
CAPRIN1-208ENST00000530008 SULT1A3P0DMM9 295 aa3.1□□□□□ -1.91
CAPRIN1-208ENST00000530008 SULT1A4P0DMN0 295 aa3.1□□□□□ -1.91
CAPRIN1-208ENST00000530008 PSMB8P28062 276 aa3.1□□□□□ -1.91
CAPRIN1-208ENST00000530008 LYZL1Q6UWQ5 148 aa3.1□□□□□ -1.91
CAPRIN1-208ENST00000530008 TMED4Q7Z7H5 227 aa3.1□□□□□ -1.91
CAPRIN1-208ENST00000530008 STX12Q86Y82 276 aa3.1□□□□□ -1.91
CAPRIN1-208ENST00000530008 OR11H6Q8NGC7 330 aa3.1□□□□□ -1.91
CAPRIN1-208ENST00000530008 GNPDA2Q8TDQ7 276 aa3.1□□□□□ -1.91
CAPRIN1-208ENST00000530008 MRPS24Q96EL2 167 aaKnown RBP3.1□□□□□ -1.91
CAPRIN1-208ENST00000530008 Q9BRP9 147 aa3.1□□□□□ -1.91
CAPRIN1-208ENST00000530008 TIMM9Q9Y5J7 89 aa3.1□□□□□ -1.91
CAPRIN1-208ENST00000530008 RTL1A6NKG5 1358 aa3.1□□□□□ -1.91
CAPRIN1-208ENST00000530008 FNDC10F2Z333 226 aa3.09□□□□□ -1.91
CAPRIN1-208ENST00000530008 CSRP1P21291 193 aaKnown RBP3.09□□□□□ -1.91
CAPRIN1-208ENST00000530008 FUSP35637 526 aaKnown RBP eCLIP3.09□□□□□ -1.91
CAPRIN1-208ENST00000530008 EVX1P49640 407 aa3.09□□□□□ -1.91
CAPRIN1-208ENST00000530008 ZNF90Q03938 601 aa3.09□□□□□ -1.91
CAPRIN1-208ENST00000530008 SS18Q15532 418 aa3.09□□□□□ -1.91
CAPRIN1-208ENST00000530008 MOGQ16653 247 aa3.09□□□□□ -1.91
CAPRIN1-208ENST00000530008 LYG2Q86SG7 212 aa3.09□□□□□ -1.91
CAPRIN1-208ENST00000530008 DYNAPQ8N1N2 210 aa3.09□□□□□ -1.91
CAPRIN1-208ENST00000530008 H1FXQ92522 213 aaKnown RBP3.09□□□□□ -1.91
CAPRIN1-208ENST00000530008 SLC7A6Q92536 515 aa3.09□□□□□ -1.91
CAPRIN1-208ENST00000530008 NDUFB11Q9NX14 153 aa3.09□□□□□ -1.91
CAPRIN1-208ENST00000530008 CYSLTR1Q9Y271 337 aa3.09□□□□□ -1.91
CAPRIN1-208ENST00000530008 TRAV7A0A075B6U4 112 aa3.08□□□□□ -1.92
CAPRIN1-208ENST00000530008 TRAV38-1A0A0B4J264 116 aa3.08□□□□□ -1.92
CAPRIN1-208ENST00000530008 IRGMA1A4Y4 181 aa3.08□□□□□ -1.92
CAPRIN1-208ENST00000530008 IFNA10P01566 189 aa3.08□□□□□ -1.92
CAPRIN1-208ENST00000530008 MSMBP08118 114 aa3.08□□□□□ -1.92
CAPRIN1-208ENST00000530008 PPIBP23284 216 aaKnown RBP3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms