RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 HAPLN4Q86UW8 402 aa11.54□□□□□ -0.56
TTC39A-216ENST00000530004 SLC7A5P1Q8MH63 180 aa11.54□□□□□ -0.56
TTC39A-216ENST00000530004 DYNAPQ8N1N2 210 aa11.54□□□□□ -0.56
TTC39A-216ENST00000530004 C17orf50Q8WW18 174 aa11.54□□□□□ -0.56
TTC39A-216ENST00000530004 TMED6Q8WW62 240 aa11.54□□□□□ -0.56
TTC39A-216ENST00000530004 TSNAXQ99598 290 aaKnown RBP11.54□□□□□ -0.56
TTC39A-216ENST00000530004 HINT2Q9BX68 163 aa11.54□□□□□ -0.56
TTC39A-216ENST00000530004 HIPK2Q9H2X6 1198 aa11.54□□□□□ -0.56
TTC39A-216ENST00000530004 HEYLQ9NQ87 328 aaPredicted RBP11.54□□□□□ -0.56
TTC39A-216ENST00000530004 TPSG1Q9NRR2 321 aa11.54□□□□□ -0.56
TTC39A-216ENST00000530004 TEX50A0A1B0GTY4 177 aa11.53□□□□□ -0.56
TTC39A-216ENST00000530004 VENTXO95231 258 aa11.53□□□□□ -0.56
TTC39A-216ENST00000530004 SRP14P37108 136 aaKnown RBP11.53□□□□□ -0.56
TTC39A-216ENST00000530004 HBG1P69891 147 aa11.53□□□□□ -0.56
TTC39A-216ENST00000530004 HBG2P69892 147 aa11.53□□□□□ -0.56
TTC39A-216ENST00000530004 HABP2Q14520 560 aaPredicted RBP11.53□□□□□ -0.56
TTC39A-216ENST00000530004 CLLU1Q5K131 121 aa11.53□□□□□ -0.56
TTC39A-216ENST00000530004 OR8G2PQ6IF36 304 aa11.53□□□□□ -0.56
TTC39A-216ENST00000530004 STPG2Q8N412 459 aa11.53□□□□□ -0.56
TTC39A-216ENST00000530004 AJUBAQ96IF1 538 aa11.53□□□□□ -0.56
TTC39A-216ENST00000530004 COMMD5Q9GZQ3 224 aa11.53□□□□□ -0.56
TTC39A-216ENST00000530004 ENY2Q9NPA8 101 aa11.53□□□□□ -0.56
TTC39A-216ENST00000530004 CDC42EP3Q9UKI2 254 aa11.53□□□□□ -0.56
TTC39A-216ENST00000530004 SONP18583 2426 aaKnown RBP11.52□□□□□ -0.56
TTC39A-216ENST00000530004 INAFM1C9JVW0 142 aa11.52□□□□□ -0.57
TTC39A-216ENST00000530004 RPP30P78346 268 aaKnown RBP11.52□□□□□ -0.57
TTC39A-216ENST00000530004 PRCDQ00LT1 54 aa11.52□□□□□ -0.57
TTC39A-216ENST00000530004 PSG5Q15238 335 aa11.52□□□□□ -0.57
TTC39A-216ENST00000530004 C9orf139Q6ZV77 190 aa11.52□□□□□ -0.57
TTC39A-216ENST00000530004 TEX45Q8NA69 505 aa11.52□□□□□ -0.57
TTC39A-216ENST00000530004 OR5B3Q8NH48 314 aa11.52□□□□□ -0.57
TTC39A-216ENST00000530004 MALSU1Q96EH3 234 aa11.52□□□□□ -0.57
TTC39A-216ENST00000530004 ATP5SQ99766 215 aa11.52□□□□□ -0.57
TTC39A-216ENST00000530004 RNF5Q99942 180 aa11.52□□□□□ -0.57
TTC39A-216ENST00000530004 ARV1Q9H2C2 271 aa11.52□□□□□ -0.57
TTC39A-216ENST00000530004 ZNF430Q9H8G1 570 aaPredicted RBP11.52□□□□□ -0.57
TTC39A-216ENST00000530004 PLEKHA3Q9HB20 300 aa11.52□□□□□ -0.57
TTC39A-216ENST00000530004 SOX21Q9Y651 276 aaPredicted RBP11.52□□□□□ -0.57
TTC39A-216ENST00000530004 A0A0U1RQK1 487 aa11.51□□□□□ -0.57
TTC39A-216ENST00000530004 C15orf62A8K5M9 175 aa11.51□□□□□ -0.57
TTC39A-216ENST00000530004 FBXO24O75426 580 aa11.51□□□□□ -0.57
TTC39A-216ENST00000530004 DFFBO76075 338 aa11.51□□□□□ -0.57
TTC39A-216ENST00000530004 IFNA10P01566 189 aa11.51□□□□□ -0.57
TTC39A-216ENST00000530004 IGKV1D-33P01593 117 aa11.51□□□□□ -0.57
TTC39A-216ENST00000530004 IGKV1-33P01594 117 aa11.51□□□□□ -0.57
TTC39A-216ENST00000530004 CRYGBP07316 175 aa11.51□□□□□ -0.57
TTC39A-216ENST00000530004 CD24P25063 80 aa11.51□□□□□ -0.57
TTC39A-216ENST00000530004 HNF4GQ14541 408 aa11.51□□□□□ -0.57
TTC39A-216ENST00000530004 EIF5AL1Q6IS14 154 aaKnown RBP11.51□□□□□ -0.57
TTC39A-216ENST00000530004 BCL6BQ8N143 479 aaPredicted RBP11.51□□□□□ -0.57
TTC39A-216ENST00000530004 LILRB2Q8N423 598 aa11.51□□□□□ -0.57
TTC39A-216ENST00000530004 C22orf15Q8WYQ4 148 aa11.51□□□□□ -0.57
TTC39A-216ENST00000530004 GINS3Q9BRX5 216 aa11.51□□□□□ -0.57
TTC39A-216ENST00000530004 PMS2P5A8MQ11 134 aa11.51□□□□□ -0.57
TTC39A-216ENST00000530004 NMBP08949 121 aa11.51□□□□□ -0.57
TTC39A-216ENST00000530004 SLC38A11Q08AI6 406 aa11.51□□□□□ -0.57
TTC39A-216ENST00000530004 HES1Q14469 280 aa11.51□□□□□ -0.57
TTC39A-216ENST00000530004 MRGPRG-AS1Q2M3A8 158 aa11.51□□□□□ -0.57
TTC39A-216ENST00000530004 THNSL2Q86YJ6 484 aa11.51□□□□□ -0.57
TTC39A-216ENST00000530004 HSD17B11Q8NBQ5 300 aa11.51□□□□□ -0.57
TTC39A-216ENST00000530004 OR1L8Q8NGR8 309 aa11.51□□□□□ -0.57
TTC39A-216ENST00000530004 SLC25A32Q9H2D1 315 aa11.51□□□□□ -0.57
TTC39A-216ENST00000530004 METTL1Q9UBP6 276 aaKnown RBP11.51□□□□□ -0.57
TTC39A-216ENST00000530004 SIGLEC9Q9Y336 463 aa11.51□□□□□ -0.57
TTC39A-216ENST00000530004 TET2Q6N021 2002 aaPredicted RBP11.51□□□□□ -0.57
TTC39A-216ENST00000530004 ATP6V1G1O75348 118 aa11.5□□□□□ -0.57
TTC39A-216ENST00000530004 MOSP00540 346 aa11.5□□□□□ -0.57
TTC39A-216ENST00000530004 SNRNP70P08621 437 aaKnown RBP11.5□□□□□ -0.57
TTC39A-216ENST00000530004 OR8U8P0C7N1 319 aa11.5□□□□□ -0.57
TTC39A-216ENST00000530004 PJVKQ0ZLH3 352 aa11.5□□□□□ -0.57
TTC39A-216ENST00000530004 C10orf55Q5SWW7 151 aa11.5□□□□□ -0.57
TTC39A-216ENST00000530004 MMD2Q8IY49 270 aa11.5□□□□□ -0.57
TTC39A-216ENST00000530004 OR10P1Q8NGE3 313 aa11.5□□□□□ -0.57
TTC39A-216ENST00000530004 NDUFA4L2Q9NRX3 87 aa11.5□□□□□ -0.57
TTC39A-216ENST00000530004 FAM96BQ9Y3D0 163 aa11.5□□□□□ -0.57
TTC39A-216ENST00000530004 E7EUB6 86 aa11.49□□□□□ -0.57
TTC39A-216ENST00000530004 RRHO14718 337 aa11.49□□□□□ -0.57
TTC39A-216ENST00000530004 IFNA5P01569 189 aa11.49□□□□□ -0.57
TTC39A-216ENST00000530004 F2RL1P55085 397 aa11.49□□□□□ -0.57
TTC39A-216ENST00000530004 MMDQ15546 238 aa11.49□□□□□ -0.57
TTC39A-216ENST00000530004 PRSS8Q16651 343 aa11.49□□□□□ -0.57
TTC39A-216ENST00000530004 SLC25A24Q6NUK1 477 aa11.49□□□□□ -0.57
TTC39A-216ENST00000530004 SLC24A4Q8NFF2 622 aa11.49□□□□□ -0.57
TTC39A-216ENST00000530004 OR2T10Q8NGZ9 312 aa11.49□□□□□ -0.57
TTC39A-216ENST00000530004 EAF1Q96JC9 268 aaPredicted RBP11.49□□□□□ -0.57
TTC39A-216ENST00000530004 SH3BGRL3Q9H299 93 aa11.49□□□□□ -0.57
TTC39A-216ENST00000530004 FBXL15Q9H469 300 aa11.49□□□□□ -0.57
TTC39A-216ENST00000530004 FBP1P09467 338 aa11.49□□□□□ -0.57
TTC39A-216ENST00000530004 SRD5A1P18405 259 aa11.49□□□□□ -0.57
TTC39A-216ENST00000530004 NPY1RP25929 384 aa11.49□□□□□ -0.57
TTC39A-216ENST00000530004 PLGLAQ15195 96 aa11.49□□□□□ -0.57
TTC39A-216ENST00000530004 DEFB112Q30KQ8 113 aa11.49□□□□□ -0.57
TTC39A-216ENST00000530004 FBLN7Q53RD9 439 aa11.49□□□□□ -0.57
TTC39A-216ENST00000530004 PPP1R27Q86WC6 154 aa11.49□□□□□ -0.57
TTC39A-216ENST00000530004 OR10W1Q8NGF6 305 aa11.49□□□□□ -0.57
TTC39A-216ENST00000530004 TMEM170AQ8WVE7 144 aa11.49□□□□□ -0.57
TTC39A-216ENST00000530004 PINX1Q96BK5 328 aaKnown RBP11.49□□□□□ -0.57
TTC39A-216ENST00000530004 MEGF9Q9H1U4 602 aa11.49□□□□□ -0.57
TTC39A-216ENST00000530004 NAV3Q8IVL0 2385 aa11.48□□□□□ -0.57
TTC39A-216ENST00000530004 A0A1W2PN81 502 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms