RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 WDR82Q6UXN9 313 aa6.84□□□□□ -1.31
CTNND1-220ENST00000529526 TCF24Q7RTU0 167 aa6.84□□□□□ -1.31
CTNND1-220ENST00000529526 FAM57AQ8TBR7 257 aa6.84□□□□□ -1.31
CTNND1-220ENST00000529526 PSMG3Q9BT73 122 aaPredicted RBP6.84□□□□□ -1.31
CTNND1-220ENST00000529526 SIPA1L1O43166 1804 aa6.84□□□□□ -1.31
CTNND1-220ENST00000529526 HLA-DRB1P01911 266 aa6.84□□□□□ -1.31
CTNND1-220ENST00000529526 PRB4P10163 310 aaPredicted RBP6.84□□□□□ -1.31
CTNND1-220ENST00000529526 TRAV24A0A0B4J272 114 aa6.84□□□□□ -1.31
CTNND1-220ENST00000529526 TSPOP30536 169 aa6.84□□□□□ -1.31
CTNND1-220ENST00000529526 CDX1P47902 265 aaPredicted RBP6.84□□□□□ -1.31
CTNND1-220ENST00000529526 TNFSF10P50591 281 aa6.84□□□□□ -1.31
CTNND1-220ENST00000529526 TMEM30BQ3MIR4 351 aa6.84□□□□□ -1.31
CTNND1-220ENST00000529526 IMMP1LQ96LU5 166 aa6.84□□□□□ -1.31
CTNND1-220ENST00000529526 CCDC88CQ9P219 2028 aa6.84□□□□□ -1.31
CTNND1-220ENST00000529526 A0A1B0GTI1 187 aa6.84□□□□□ -1.31
CTNND1-220ENST00000529526 CCL3L1P16619 93 aa6.84□□□□□ -1.31
CTNND1-220ENST00000529526 DDTP30046 118 aa6.84□□□□□ -1.31
CTNND1-220ENST00000529526 LHX2P50458 406 aa6.84□□□□□ -1.31
CTNND1-220ENST00000529526 PPP1R27Q86WC6 154 aa6.84□□□□□ -1.31
CTNND1-220ENST00000529526 NR2C2APQ86WQ0 139 aa6.84□□□□□ -1.31
CTNND1-220ENST00000529526 TMEM105Q8N8V8 129 aa6.84□□□□□ -1.31
CTNND1-220ENST00000529526 WNT10AQ9GZT5 417 aa6.84□□□□□ -1.31
CTNND1-220ENST00000529526 PQLC2LA1A4F0 135 aa6.84□□□□□ -1.32
CTNND1-220ENST00000529526 J3QW42 95 aa6.84□□□□□ -1.32
CTNND1-220ENST00000529526 LDLRAD4O15165 306 aa6.84□□□□□ -1.32
CTNND1-220ENST00000529526 COX6CP09669 75 aa6.84□□□□□ -1.32
CTNND1-220ENST00000529526 PLP1P60201 277 aa6.84□□□□□ -1.32
CTNND1-220ENST00000529526 CLDND2Q8NHS1 167 aa6.84□□□□□ -1.32
CTNND1-220ENST00000529526 SNAI2O43623 268 aa6.83□□□□□ -1.32
CTNND1-220ENST00000529526 NBEAP1P0C6P0 100 aa6.83□□□□□ -1.32
CTNND1-220ENST00000529526 ZCCHC24Q8N2G6 241 aaKnown RBP6.83□□□□□ -1.32
CTNND1-220ENST00000529526 ITLN2Q8WWU7 325 aaPredicted RBP6.83□□□□□ -1.32
CTNND1-220ENST00000529526 ARPC1AQ92747 370 aa6.83□□□□□ -1.32
CTNND1-220ENST00000529526 DMRTA2Q96SC8 542 aa6.83□□□□□ -1.32
CTNND1-220ENST00000529526 REPIN1Q9BWE0 567 aaKnown RBP6.83□□□□□ -1.32
CTNND1-220ENST00000529526 TRAV14DV4A0A0A6YYC5 116 aa6.83□□□□□ -1.32
CTNND1-220ENST00000529526 PINLYPA6NC86 204 aa6.83□□□□□ -1.32
CTNND1-220ENST00000529526 CEACAM4O75871 244 aa6.83□□□□□ -1.32
CTNND1-220ENST00000529526 IGFBP3P17936 291 aaPredicted RBP6.83□□□□□ -1.32
CTNND1-220ENST00000529526 CD24P25063 80 aa6.83□□□□□ -1.32
CTNND1-220ENST00000529526 RNASE4P34096 147 aaKnown RBP6.83□□□□□ -1.32
CTNND1-220ENST00000529526 MRPL14Q6P1L8 145 aaKnown RBP6.83□□□□□ -1.32
CTNND1-220ENST00000529526 GATAD1Q8WUU5 269 aa6.83□□□□□ -1.32
CTNND1-220ENST00000529526 MARVELD3Q96A59 401 aa6.83□□□□□ -1.32
CTNND1-220ENST00000529526 DPH3Q96FX2 82 aa6.83□□□□□ -1.32
CTNND1-220ENST00000529526 DPM3Q9P2X0 92 aa6.83□□□□□ -1.32
CTNND1-220ENST00000529526 SAA2-SAA4A0A096LPE2 208 aa6.83□□□□□ -1.32
CTNND1-220ENST00000529526 IQCF6A8MYZ5 107 aa6.83□□□□□ -1.32
CTNND1-220ENST00000529526 IGHV3-11P01762 117 aa6.83□□□□□ -1.32
CTNND1-220ENST00000529526 SAA2P0DJI9 122 aaPredicted RBP6.83□□□□□ -1.32
CTNND1-220ENST00000529526 C12orf54Q6X4T0 127 aa6.83□□□□□ -1.32
CTNND1-220ENST00000529526 KIR2DL4Q99706 377 aa6.83□□□□□ -1.32
CTNND1-220ENST00000529526 GGACTQ9BVM4 153 aa6.83□□□□□ -1.32
CTNND1-220ENST00000529526 GEMIN7Q9H840 131 aaKnown RBP6.83□□□□□ -1.32
CTNND1-220ENST00000529526 DEPPQ9NTK1 212 aa6.83□□□□□ -1.32
CTNND1-220ENST00000529526 TRBV9A0A0B4J1U6 114 aa6.83□□□□□ -1.32
CTNND1-220ENST00000529526 PEX7O00628 323 aa6.83□□□□□ -1.32
CTNND1-220ENST00000529526 TM4SF5O14894 197 aa6.83□□□□□ -1.32
CTNND1-220ENST00000529526 EMP1P54849 157 aa6.83□□□□□ -1.32
CTNND1-220ENST00000529526 TMEM136Q6ZRR5 245 aa6.83□□□□□ -1.32
CTNND1-220ENST00000529526 OSR1Q8TAX0 266 aaPredicted RBP6.83□□□□□ -1.32
CTNND1-220ENST00000529526 IGKV1D-13A0A0B4J2D9 117 aa6.83□□□□□ -1.32
CTNND1-220ENST00000529526 PRR32B1ATL7 298 aa6.83□□□□□ -1.32
CTNND1-220ENST00000529526 RAMP3O60896 148 aa6.83□□□□□ -1.32
CTNND1-220ENST00000529526 IGKV1-13P0DP09 117 aa6.83□□□□□ -1.32
CTNND1-220ENST00000529526 GNG5P63218 68 aa6.83□□□□□ -1.32
CTNND1-220ENST00000529526 Q5PR19 223 aa6.83□□□□□ -1.32
CTNND1-220ENST00000529526 FLVCR1-AS1Q8TAF5 88 aa6.83□□□□□ -1.32
CTNND1-220ENST00000529526 ST6GALNAC6Q969X2 333 aa6.83□□□□□ -1.32
CTNND1-220ENST00000529526 SCN10AQ9Y5Y9 1956 aa6.82□□□□□ -1.32
CTNND1-220ENST00000529526 GREB1LQ9C091 1923 aaPredicted RBP6.82□□□□□ -1.32
CTNND1-220ENST00000529526 EFEMP2O95967 443 aa6.82□□□□□ -1.32
CTNND1-220ENST00000529526 IGLV3-19P01714 112 aa6.82□□□□□ -1.32
CTNND1-220ENST00000529526 MBD3L1Q8WWY6 194 aa6.82□□□□□ -1.32
CTNND1-220ENST00000529526 FAM131CQ96AQ9 280 aa6.82□□□□□ -1.32
CTNND1-220ENST00000529526 LYNX1G3V0Z9 82 aa6.82□□□□□ -1.32
CTNND1-220ENST00000529526 SAA1P0DJI8 122 aaPredicted RBP6.82□□□□□ -1.32
CTNND1-220ENST00000529526 LYNX1P0DP58 116 aa6.82□□□□□ -1.32
CTNND1-220ENST00000529526 UCP1P25874 307 aa6.82□□□□□ -1.32
CTNND1-220ENST00000529526 OR52E5Q8NH55 327 aa6.82□□□□□ -1.32
CTNND1-220ENST00000529526 FAM168AQ92567 244 aa6.82□□□□□ -1.32
CTNND1-220ENST00000529526 C18orf12Q96KH6 178 aa6.82□□□□□ -1.32
CTNND1-220ENST00000529526 KCNS1Q96KK3 526 aa6.82□□□□□ -1.32
CTNND1-220ENST00000529526 GP6Q9HCN6 339 aa6.82□□□□□ -1.32
CTNND1-220ENST00000529526 IL36BQ9NZH7 164 aa6.82□□□□□ -1.32
CTNND1-220ENST00000529526 NYNRINQ9P2P1 1898 aaKnown RBP6.82□□□□□ -1.32
CTNND1-220ENST00000529526 TRAV8-6A0A0B4J262 113 aa6.82□□□□□ -1.32
CTNND1-220ENST00000529526 RNF222A6NCQ9 220 aa6.82□□□□□ -1.32
CTNND1-220ENST00000529526 APOHP02749 345 aaPredicted RBP6.82□□□□□ -1.32
CTNND1-220ENST00000529526 RAB9AP51151 201 aa6.82□□□□□ -1.32
CTNND1-220ENST00000529526 TMEM170BQ5T4T1 132 aa6.82□□□□□ -1.32
CTNND1-220ENST00000529526 LEMD1Q68G75 181 aa6.82□□□□□ -1.32
CTNND1-220ENST00000529526 ST6GALNAC3Q8NDV1 305 aa6.82□□□□□ -1.32
CTNND1-220ENST00000529526 C1orf162Q8NEQ5 155 aaPredicted RBP6.82□□□□□ -1.32
CTNND1-220ENST00000529526 PRELID3AQ96N28 172 aa6.82□□□□□ -1.32
CTNND1-220ENST00000529526 PARD6GQ9BYG4 376 aaPredicted RBP6.82□□□□□ -1.32
CTNND1-220ENST00000529526 PLSCR2Q9NRY7 297 aa6.82□□□□□ -1.32
CTNND1-220ENST00000529526 SPRR3Q9UBC9 169 aa6.82□□□□□ -1.32
CTNND1-220ENST00000529526 CHD5Q8TDI0 1954 aa6.82□□□□□ -1.32
CTNND1-220ENST00000529526 DOCK3Q8IZD9 2030 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms