RNA–Protein interactions for RNA: ENST00000529308.5

USP35-203, Transcript of ubiquitin specific peptidase 35, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP35, Length 4,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-203ENST00000529308 MARVELD3Q96A59 401 aa12.87□□□□□ -0.35
USP35-203ENST00000529308 AGAP20933 346 aa12.86□□□□□ -0.35
USP35-203ENST00000529308 PCSK4Q6UW60 755 aa12.86□□□□□ -0.35
USP35-203ENST00000529308 P2RX4Q99571 388 aa12.86□□□□□ -0.35
USP35-203ENST00000529308 MRPL20Q9BYC9 149 aaKnown RBP12.86□□□□□ -0.35
USP35-203ENST00000529308 VSIRQ9H7M9 311 aa12.86□□□□□ -0.35
USP35-203ENST00000529308 CGAP01215 116 aa12.86□□□□□ -0.35
USP35-203ENST00000529308 OR5AL1P0C617 328 aa12.86□□□□□ -0.35
USP35-203ENST00000529308 ATP5G3P48201 142 aa12.86□□□□□ -0.35
USP35-203ENST00000529308 IBA57Q5T440 356 aaKnown RBP12.86□□□□□ -0.35
USP35-203ENST00000529308 HIGD1AQ9Y241 93 aa12.86□□□□□ -0.35
USP35-203ENST00000529308 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.86□□□□□ -0.35
USP35-203ENST00000529308 PGPEP1LA6NFU8 196 aa12.86□□□□□ -0.35
USP35-203ENST00000529308 LRRC75BQ2VPJ9 315 aa12.86□□□□□ -0.35
USP35-203ENST00000529308 RPRMLQ8N4K4 120 aa12.86□□□□□ -0.35
USP35-203ENST00000529308 C1orf162Q8NEQ5 155 aaPredicted RBP12.86□□□□□ -0.35
USP35-203ENST00000529308 HIVEP3Q5T1R4 2406 aa12.86□□□□□ -0.35
USP35-203ENST00000529308 TNCP24821 2201 aa12.86□□□□□ -0.35
USP35-203ENST00000529308 NAV2Q8IVL1 2488 aa12.86□□□□□ -0.35
USP35-203ENST00000529308 M0R2Z0 102 aa12.86□□□□□ -0.35
USP35-203ENST00000529308 DNASE2O00115 360 aaPredicted RBP12.86□□□□□ -0.35
USP35-203ENST00000529308 TRGC1P0CF51 173 aa12.86□□□□□ -0.35
USP35-203ENST00000529308 RPL30P62888 115 aaKnown RBP12.86□□□□□ -0.35
USP35-203ENST00000529308 ZNF324BQ6AW86 544 aaPredicted RBP12.86□□□□□ -0.35
USP35-203ENST00000529308 RABAC1Q9UI14 185 aa12.86□□□□□ -0.35
USP35-203ENST00000529308 SLC17A3O00476 420 aa12.85□□□□□ -0.35
USP35-203ENST00000529308 SRP19P09132 144 aaKnown RBP12.85□□□□□ -0.35
USP35-203ENST00000529308 LY6DQ14210 128 aa12.85□□□□□ -0.35
USP35-203ENST00000529308 LY6EQ16553 131 aa12.85□□□□□ -0.35
USP35-203ENST00000529308 C21orf62-AS1Q17RA5 79 aa12.85□□□□□ -0.35
USP35-203ENST00000529308 RSPO1Q2MKA7 263 aaPredicted RBP12.85□□□□□ -0.35
USP35-203ENST00000529308 FAM53AQ6NSI3 398 aaPredicted RBP12.85□□□□□ -0.35
USP35-203ENST00000529308 RBM14Q96PK6 669 aaKnown RBP12.85□□□□□ -0.35
USP35-203ENST00000529308 SAA2-SAA4A0A096LPE2 208 aa12.85□□□□□ -0.35
USP35-203ENST00000529308 IGHV3-23P01764 117 aa12.85□□□□□ -0.35
USP35-203ENST00000529308 SAA2P0DJI9 122 aaPredicted RBP12.85□□□□□ -0.35
USP35-203ENST00000529308 C8orf88P0DMB2 117 aa12.85□□□□□ -0.35
USP35-203ENST00000529308 TFPI2P48307 235 aa12.85□□□□□ -0.35
USP35-203ENST00000529308 HNRNPA3P51991 378 aaKnown RBP12.85□□□□□ -0.35
USP35-203ENST00000529308 NHLH1Q02575 133 aa12.85□□□□□ -0.35
USP35-203ENST00000529308 MDS2Q8NDY4 140 aa12.85□□□□□ -0.35
USP35-203ENST00000529308 ZNF430Q9H8G1 570 aaPredicted RBP12.85□□□□□ -0.35
USP35-203ENST00000529308 DLL1O00548 723 aa12.85□□□□□ -0.35
USP35-203ENST00000529308 APOBEC3AP31941 199 aaPredicted RBP12.85□□□□□ -0.35
USP35-203ENST00000529308 CDKN1AP38936 164 aa12.85□□□□□ -0.35
USP35-203ENST00000529308 MORN2Q502X0 79 aa12.85□□□□□ -0.35
USP35-203ENST00000529308 CHODLQ9H9P2 273 aa12.85□□□□□ -0.35
USP35-203ENST00000529308 M0QZ24 198 aa12.84□□□□□ -0.35
USP35-203ENST00000529308 VAMP3Q15836 100 aa12.84□□□□□ -0.35
USP35-203ENST00000529308 STXBP6Q8NFX7 210 aa12.84□□□□□ -0.35
USP35-203ENST00000529308 OR4A5Q8NH83 315 aa12.84□□□□□ -0.35
USP35-203ENST00000529308 SNRNP40Q96DI7 357 aaKnown RBP12.84□□□□□ -0.35
USP35-203ENST00000529308 BMPR1BO00238 502 aa12.84□□□□□ -0.35
USP35-203ENST00000529308 NAPSAO96009 420 aa12.84□□□□□ -0.35
USP35-203ENST00000529308 IL6RP08887 468 aaPredicted RBP12.84□□□□□ -0.35
USP35-203ENST00000529308 WDR73Q6P4I2 378 aa12.84□□□□□ -0.35
USP35-203ENST00000529308 UNQ5815/PRO19632Q6UWF5 114 aa12.84□□□□□ -0.35
USP35-203ENST00000529308 CLEC7AQ9BXN2 247 aa12.84□□□□□ -0.35
USP35-203ENST00000529308 KIF26AQ9ULI4 1882 aaPredicted RBP12.84□□□□□ -0.35
USP35-203ENST00000529308 CCDC144NLQ6NUI1 221 aa12.84□□□□□ -0.35
USP35-203ENST00000529308 LHFPL4Q7Z7J7 247 aa12.84□□□□□ -0.35
USP35-203ENST00000529308 KIR3DL3Q8N743 410 aa12.84□□□□□ -0.35
USP35-203ENST00000529308 C1orf147Q96MC9 270 aaPredicted RBP12.84□□□□□ -0.35
USP35-203ENST00000529308 CYTL1Q9NRR1 136 aa12.84□□□□□ -0.35
USP35-203ENST00000529308 SMIM6P0DI80 62 aa12.83□□□□□ -0.35
USP35-203ENST00000529308 C10orf55Q5SWW7 151 aa12.83□□□□□ -0.35
USP35-203ENST00000529308 TRBV23-1A0A0A0MS06 115 aa12.83□□□□□ -0.36
USP35-203ENST00000529308 NDUFA2O43678 99 aa12.83□□□□□ -0.36
USP35-203ENST00000529308 GCHFRP30047 84 aa12.83□□□□□ -0.36
USP35-203ENST00000529308 SELENOTP62341 195 aa12.83□□□□□ -0.36
USP35-203ENST00000529308 LCN2P80188 198 aa12.83□□□□□ -0.36
USP35-203ENST00000529308 SPACA3Q8IXA5 215 aa12.83□□□□□ -0.36
USP35-203ENST00000529308 GATAD1Q8WUU5 269 aa12.83□□□□□ -0.36
USP35-203ENST00000529308 PSMG3Q9BT73 122 aaPredicted RBP12.83□□□□□ -0.36
USP35-203ENST00000529308 USP9XQ93008 2570 aaPredicted RBP12.83□□□□□ -0.36
USP35-203ENST00000529308 C1QTNF9BB2RNN3 333 aa12.83□□□□□ -0.36
USP35-203ENST00000529308 B9A039 149 aa12.83□□□□□ -0.36
USP35-203ENST00000529308 LY6HO94772 140 aa12.83□□□□□ -0.36
USP35-203ENST00000529308 HIST1H1EP10412 219 aaKnown RBP12.83□□□□□ -0.36
USP35-203ENST00000529308 PF4V1P10720 104 aa12.83□□□□□ -0.36
USP35-203ENST00000529308 TMEM42Q69YG0 159 aa12.83□□□□□ -0.36
USP35-203ENST00000529308 FAM90A1Q86YD7 464 aa12.83□□□□□ -0.36
USP35-203ENST00000529308 TMEM186Q96B77 213 aa12.83□□□□□ -0.36
USP35-203ENST00000529308 ZMAT5Q9UDW3 170 aaKnown RBP12.83□□□□□ -0.36
USP35-203ENST00000529308 LOC105371242A0A075B767 164 aa12.83□□□□□ -0.36
USP35-203ENST00000529308 LOC389332A0A1B0GUA5 103 aa12.83□□□□□ -0.36
USP35-203ENST00000529308 A1L4Q6 167 aa12.83□□□□□ -0.36
USP35-203ENST00000529308 ZNF503-AS2A6NEH8 195 aa12.83□□□□□ -0.36
USP35-203ENST00000529308 SMIM17P0DL12 118 aa12.83□□□□□ -0.36
USP35-203ENST00000529308 CBLN1P23435 193 aa12.83□□□□□ -0.36
USP35-203ENST00000529308 KLHDC1Q8N7A1 406 aa12.83□□□□□ -0.36
USP35-203ENST00000529308 WDR31Q8NA23 367 aa12.83□□□□□ -0.36
USP35-203ENST00000529308 HSPB9Q9BQS6 159 aa12.83□□□□□ -0.36
USP35-203ENST00000529308 A0A0G2JRQ6 117 aa12.82□□□□□ -0.36
USP35-203ENST00000529308 LIPFP07098 398 aa12.82□□□□□ -0.36
USP35-203ENST00000529308 OR4D5Q8NGN0 318 aa12.82□□□□□ -0.36
USP35-203ENST00000529308 OR9G9P0C7N8 305 aa12.82□□□□□ -0.36
USP35-203ENST00000529308 ZNF506Q5JVG8 444 aa12.82□□□□□ -0.36
USP35-203ENST00000529308 CARHSP1Q9Y2V2 147 aaKnown RBP12.82□□□□□ -0.36
USP35-203ENST00000529308 ELOA3CA0A087WX78 387 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms