RNA–Protein interactions for RNA: ENST00000528865.5

CSTF3-208, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 5

Gene CSTF3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-208ENST00000528865 SSMEM1Q8WWF3 244 aa6.85□□□□□ -1.31
CSTF3-208ENST00000528865 PLPPR2Q96GM1 343 aa6.85□□□□□ -1.31
CSTF3-208ENST00000528865 EAF1Q96JC9 268 aaPredicted RBP6.85□□□□□ -1.31
CSTF3-208ENST00000528865 NDUFAF3Q9BU61 184 aa6.85□□□□□ -1.31
CSTF3-208ENST00000528865 GCM1Q9NP62 436 aa6.85□□□□□ -1.31
CSTF3-208ENST00000528865 AURKAIP1Q9NWT8 199 aaPredicted RBP6.85□□□□□ -1.31
CSTF3-208ENST00000528865 FKBP11Q9NYL4 201 aa6.85□□□□□ -1.31
CSTF3-208ENST00000528865 RPUSD1Q9UJJ7 312 aaKnown RBP6.85□□□□□ -1.31
CSTF3-208ENST00000528865 FAM215AQ9Y5M1 114 aa6.85□□□□□ -1.31
CSTF3-208ENST00000528865 DIDO1Q9BTC0 2240 aaKnown RBP6.85□□□□□ -1.31
CSTF3-208ENST00000528865 VCANP13611 3396 aa6.85□□□□□ -1.31
CSTF3-208ENST00000528865 PRR14LQ5THK1 2151 aa6.84□□□□□ -1.31
CSTF3-208ENST00000528865 TRBV9A0A0B4J1U6 114 aa6.84□□□□□ -1.31
CSTF3-208ENST00000528865 PGPEP1LA6NFU8 196 aa6.84□□□□□ -1.31
CSTF3-208ENST00000528865 SRRM4A7MD48 611 aaKnown RBP6.84□□□□□ -1.31
CSTF3-208ENST00000528865 A8MXE2 369 aa6.84□□□□□ -1.31
CSTF3-208ENST00000528865 J3QR06 171 aa6.84□□□□□ -1.31
CSTF3-208ENST00000528865 K7EN84 100 aa6.84□□□□□ -1.31
CSTF3-208ENST00000528865 NUPR1O60356 82 aa6.84□□□□□ -1.31
CSTF3-208ENST00000528865 OR5G3P0C626 314 aa6.84□□□□□ -1.31
CSTF3-208ENST00000528865 RNASE2P10153 161 aaKnown RBP6.84□□□□□ -1.31
CSTF3-208ENST00000528865 SELLP14151 372 aa6.84□□□□□ -1.31
CSTF3-208ENST00000528865 RPL31P62899 125 aaKnown RBP6.84□□□□□ -1.31
CSTF3-208ENST00000528865 PAFAH1B2P68402 229 aa6.84□□□□□ -1.31
CSTF3-208ENST00000528865 TNFAIP6P98066 277 aaPredicted RBP6.84□□□□□ -1.31
CSTF3-208ENST00000528865 Q0VG73 95 aa6.84□□□□□ -1.31
CSTF3-208ENST00000528865 RTL8BQ17RB0 113 aa6.84□□□□□ -1.31
CSTF3-208ENST00000528865 COX19Q49B96 90 aa6.84□□□□□ -1.31
CSTF3-208ENST00000528865 FAM201AQ5SY85 155 aa6.84□□□□□ -1.31
CSTF3-208ENST00000528865 C1orf194Q5T5A4 169 aa6.84□□□□□ -1.31
CSTF3-208ENST00000528865 PQLC2Q6ZP29 291 aa6.84□□□□□ -1.31
CSTF3-208ENST00000528865 ZNF833PQ6ZTB9 187 aa6.84□□□□□ -1.31
CSTF3-208ENST00000528865 MIR17HGQ75NE6 70 aa6.84□□□□□ -1.31
CSTF3-208ENST00000528865 LYG1Q8N1E2 194 aa6.84□□□□□ -1.31
CSTF3-208ENST00000528865 TMEM256Q8N2U0 113 aa6.84□□□□□ -1.31
CSTF3-208ENST00000528865 DEFB124Q8NES8 71 aa6.84□□□□□ -1.31
CSTF3-208ENST00000528865 NUP37Q8NFH4 326 aa6.84□□□□□ -1.31
CSTF3-208ENST00000528865 OR4P4Q8NGL7 312 aa6.84□□□□□ -1.31
CSTF3-208ENST00000528865 OR5B3Q8NH48 314 aa6.84□□□□□ -1.31
CSTF3-208ENST00000528865 ZNF596Q8TC21 504 aa6.84□□□□□ -1.31
CSTF3-208ENST00000528865 CACNG8Q8WXS5 425 aa6.84□□□□□ -1.31
CSTF3-208ENST00000528865 LEAP2Q969E1 77 aa6.84□□□□□ -1.31
CSTF3-208ENST00000528865 ZNF503Q96F45 646 aa6.84□□□□□ -1.31
CSTF3-208ENST00000528865 NABP2Q9BQ15 211 aa6.84□□□□□ -1.31
CSTF3-208ENST00000528865 PLEKHA3Q9HB20 300 aa6.84□□□□□ -1.31
CSTF3-208ENST00000528865 OSTCQ9NRP0 149 aa6.84□□□□□ -1.31
CSTF3-208ENST00000528865 SLC35D1Q9NTN3 355 aa6.84□□□□□ -1.31
CSTF3-208ENST00000528865 TECRQ9NZ01 308 aaKnown RBP6.84□□□□□ -1.31
CSTF3-208ENST00000528865 TP53TG3Q9ULZ0 132 aa6.84□□□□□ -1.31
CSTF3-208ENST00000528865 V9GYV3 84 aa6.84□□□□□ -1.31
CSTF3-208ENST00000528865 FAM186AA6NE01 2351 aa6.84□□□□□ -1.31
CSTF3-208ENST00000528865 TET2Q6N021 2002 aaPredicted RBP6.84□□□□□ -1.31
CSTF3-208ENST00000528865 LAMA1P25391 3075 aa6.84□□□□□ -1.31
CSTF3-208ENST00000528865 SPAARA0A1B0GVQ0 90 aa6.83□□□□□ -1.32
CSTF3-208ENST00000528865 A0A1W2PRE2 83 aa6.83□□□□□ -1.32
CSTF3-208ENST00000528865 hADV38S2A0JD32 116 aa6.83□□□□□ -1.32
CSTF3-208ENST00000528865 HELTA6NFD8 242 aa6.83□□□□□ -1.32
CSTF3-208ENST00000528865 TNFRSF13BO14836 293 aaPredicted RBP6.83□□□□□ -1.32
CSTF3-208ENST00000528865 MMP23AO75900 390 aa6.83□□□□□ -1.32
CSTF3-208ENST00000528865 IGHV3-7P01780 117 aa6.83□□□□□ -1.32
CSTF3-208ENST00000528865 MYOD1P15172 320 aa6.83□□□□□ -1.32
CSTF3-208ENST00000528865 BMP5P22003 454 aa6.83□□□□□ -1.32
CSTF3-208ENST00000528865 TNFSF4P23510 183 aa6.83□□□□□ -1.32
CSTF3-208ENST00000528865 OR10J1P30954 320 aa6.83□□□□□ -1.32
CSTF3-208ENST00000528865 ADMP35318 185 aa6.83□□□□□ -1.32
CSTF3-208ENST00000528865 TAS2R60P59551 318 aa6.83□□□□□ -1.32
CSTF3-208ENST00000528865 SELENOVP59797 346 aa6.83□□□□□ -1.32
CSTF3-208ENST00000528865 ZNF90Q03938 601 aa6.83□□□□□ -1.32
CSTF3-208ENST00000528865 MEF2CQ06413 473 aaPredicted RBP6.83□□□□□ -1.32
CSTF3-208ENST00000528865 CD69Q07108 199 aa6.83□□□□□ -1.32
CSTF3-208ENST00000528865 HLA-DRB5Q30154 266 aa6.83□□□□□ -1.32
CSTF3-208ENST00000528865 TMEM177Q53S58 311 aa6.83□□□□□ -1.32
CSTF3-208ENST00000528865 DUX4L9Q6RFH8 374 aaPredicted RBP6.83□□□□□ -1.32
CSTF3-208ENST00000528865 MRPL41Q8IXM3 137 aaKnown RBP6.83□□□□□ -1.32
CSTF3-208ENST00000528865 C8orf31Q8N9H6 132 aa6.83□□□□□ -1.32
CSTF3-208ENST00000528865 OR5AN1Q8NGI8 311 aa6.83□□□□□ -1.32
CSTF3-208ENST00000528865 OR4A5Q8NH83 315 aa6.83□□□□□ -1.32
CSTF3-208ENST00000528865 OSR1Q8TAX0 266 aaPredicted RBP6.83□□□□□ -1.32
CSTF3-208ENST00000528865 RNF2Q99496 336 aa6.83□□□□□ -1.32
CSTF3-208ENST00000528865 CCL13Q99616 98 aa6.83□□□□□ -1.32
CSTF3-208ENST00000528865 GNB1LQ9BYB4 327 aa6.83□□□□□ -1.32
CSTF3-208ENST00000528865 PARD6AQ9NPB6 346 aa6.83□□□□□ -1.32
CSTF3-208ENST00000528865 NDUFA4L2Q9NRX3 87 aa6.83□□□□□ -1.32
CSTF3-208ENST00000528865 TP53TG5Q9Y2B4 290 aa6.83□□□□□ -1.32
CSTF3-208ENST00000528865 EYSQ5T1H1 3165 aa6.82□□□□□ -1.32
CSTF3-208ENST00000528865 SPEGQ15772 3267 aa6.82□□□□□ -1.32
CSTF3-208ENST00000528865 A0A1B0GV90 55 aa6.82□□□□□ -1.32
CSTF3-208ENST00000528865 PSMB11A5LHX3 300 aa6.82□□□□□ -1.32
CSTF3-208ENST00000528865 ZNF705GA8MUZ8 300 aaPredicted RBP6.82□□□□□ -1.32
CSTF3-208ENST00000528865 ISLRO14498 428 aa6.82□□□□□ -1.32
CSTF3-208ENST00000528865 IGLV2-8P01709 118 aa6.82□□□□□ -1.32
CSTF3-208ENST00000528865 OR4A8P0C604 315 aa6.82□□□□□ -1.32
CSTF3-208ENST00000528865 C8orf88P0DMB2 117 aa6.82□□□□□ -1.32
CSTF3-208ENST00000528865 CD40P25942 277 aa6.82□□□□□ -1.32
CSTF3-208ENST00000528865 LINC00310P59036 64 aa6.82□□□□□ -1.32
CSTF3-208ENST00000528865 TAS2R45P59539 299 aa6.82□□□□□ -1.32
CSTF3-208ENST00000528865 ERVFC1-1P60608 527 aa6.82□□□□□ -1.32
CSTF3-208ENST00000528865 KRTCAP3Q53RY4 240 aa6.82□□□□□ -1.32
CSTF3-208ENST00000528865 FAM71F2Q6NXP2 309 aa6.82□□□□□ -1.32
CSTF3-208ENST00000528865 LINC00311Q8N616 119 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms