RNA–Protein interactions for RNA: ENST00000528563.5

HIF3A-211, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2

Gene HIF3A, Length 1,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-211ENST00000528563 FBXL7Q9UJT9 491 aa12.92□□□□□ -0.34
HIF3A-211ENST00000528563 GPR132Q9UNW8 380 aa12.92□□□□□ -0.34
HIF3A-211ENST00000528563 PRKDCP78527 4128 aaKnown RBP12.92□□□□□ -0.34
HIF3A-211ENST00000528563 DNAH3Q8TD57 4116 aa12.92□□□□□ -0.34
HIF3A-211ENST00000528563 C3orf85A0A1B0GTC6 90 aa12.91□□□□□ -0.34
HIF3A-211ENST00000528563 WI2-2373I1.2A0A1W2PRP0 233 aa12.91□□□□□ -0.34
HIF3A-211ENST00000528563 K7EIL1 84 aa12.91□□□□□ -0.34
HIF3A-211ENST00000528563 DHFRP00374 187 aa12.91□□□□□ -0.34
HIF3A-211ENST00000528563 REG1AP05451 166 aa12.91□□□□□ -0.34
HIF3A-211ENST00000528563 ETV6P41212 452 aa12.91□□□□□ -0.34
HIF3A-211ENST00000528563 ECI1P42126 302 aa12.91□□□□□ -0.34
HIF3A-211ENST00000528563 ZNF79Q15937 498 aa12.91□□□□□ -0.34
HIF3A-211ENST00000528563 C15orf32Q32M92 178 aa12.91□□□□□ -0.34
HIF3A-211ENST00000528563 THOC7Q6I9Y2 204 aaKnown RBP12.91□□□□□ -0.34
HIF3A-211ENST00000528563 ACSM6Q6P461 480 aa12.91□□□□□ -0.34
HIF3A-211ENST00000528563 TSC22D3Q99576 134 aa12.91□□□□□ -0.34
HIF3A-211ENST00000528563 PRRT1Q99946 306 aa12.91□□□□□ -0.34
HIF3A-211ENST00000528563 TMEM14BQ9NUH8 114 aa12.91□□□□□ -0.34
HIF3A-211ENST00000528563 SLC2A8Q9NY64 477 aa12.91□□□□□ -0.34
HIF3A-211ENST00000528563 FKBP11Q9NYL4 201 aa12.91□□□□□ -0.34
HIF3A-211ENST00000528563 NDUFA13Q9P0J0 144 aa12.91□□□□□ -0.34
HIF3A-211ENST00000528563 PRNDQ9UKY0 176 aa12.91□□□□□ -0.34
HIF3A-211ENST00000528563 OR51B2Q9Y5P1 312 aa12.91□□□□□ -0.34
HIF3A-211ENST00000528563 SORL1Q92673 2214 aa12.91□□□□□ -0.34
HIF3A-211ENST00000528563 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.91□□□□□ -0.34
HIF3A-211ENST00000528563 DBX1A6NMT0 343 aa12.91□□□□□ -0.34
HIF3A-211ENST00000528563 NDUFB8O95169 186 aa12.91□□□□□ -0.34
HIF3A-211ENST00000528563 HIST1H1BP16401 226 aaKnown RBP12.91□□□□□ -0.34
HIF3A-211ENST00000528563 WT1-ASQ06250 92 aa12.91□□□□□ -0.34
HIF3A-211ENST00000528563 PYDC2Q56P42 97 aa12.91□□□□□ -0.34
HIF3A-211ENST00000528563 H2BFWTQ7Z2G1 175 aa12.91□□□□□ -0.34
HIF3A-211ENST00000528563 HSD17B13Q7Z5P4 300 aaPredicted RBP12.91□□□□□ -0.34
HIF3A-211ENST00000528563 ZNF429Q86V71 674 aa12.91□□□□□ -0.34
HIF3A-211ENST00000528563 Q8N402 240 aa12.91□□□□□ -0.34
HIF3A-211ENST00000528563 CCDC71LQ8N9Z2 235 aa12.91□□□□□ -0.34
HIF3A-211ENST00000528563 MRAPQ8TCY5 172 aa12.91□□□□□ -0.34
HIF3A-211ENST00000528563 TRIM63Q969Q1 353 aa12.91□□□□□ -0.34
HIF3A-211ENST00000528563 C5orf66Q9H5L9 145 aa12.91□□□□□ -0.34
HIF3A-211ENST00000528563 DMRT1Q9Y5R6 373 aa12.91□□□□□ -0.34
HIF3A-211ENST00000528563 IGLV11-55A0A075B6I3 123 aa12.9□□□□□ -0.34
HIF3A-211ENST00000528563 B3GALNT1O75752 331 aa12.9□□□□□ -0.34
HIF3A-211ENST00000528563 P0C879 139 aa12.9□□□□□ -0.34
HIF3A-211ENST00000528563 OR13C7P0DN81 318 aa12.9□□□□□ -0.34
HIF3A-211ENST00000528563 DEFA4P12838 97 aa12.9□□□□□ -0.34
HIF3A-211ENST00000528563 EXOSC2Q13868 293 aaKnown RBP12.9□□□□□ -0.34
HIF3A-211ENST00000528563 SP6Q3SY56 376 aa12.9□□□□□ -0.34
HIF3A-211ENST00000528563 GDPD1Q8N9F7 314 aa12.9□□□□□ -0.34
HIF3A-211ENST00000528563 OR6Q1Q8NGQ2 317 aa12.9□□□□□ -0.34
HIF3A-211ENST00000528563 OR5B3Q8NH48 314 aa12.9□□□□□ -0.34
HIF3A-211ENST00000528563 C15orf61A6NNL5 157 aa12.89□□□□□ -0.35
HIF3A-211ENST00000528563 IGKV1-5P01602 117 aa12.89□□□□□ -0.35
HIF3A-211ENST00000528563 UCP1P25874 307 aa12.89□□□□□ -0.35
HIF3A-211ENST00000528563 KLF9Q13886 244 aaPredicted RBP12.89□□□□□ -0.35
HIF3A-211ENST00000528563 SCP2D1Q9UJQ7 156 aa12.89□□□□□ -0.35
HIF3A-211ENST00000528563 C14orf166Q9Y224 244 aaKnown RBP12.89□□□□□ -0.35
HIF3A-211ENST00000528563 BMPR1BO00238 502 aa12.88□□□□□ -0.35
HIF3A-211ENST00000528563 IZUMO4Q1ZYL8 232 aa12.88□□□□□ -0.35
HIF3A-211ENST00000528563 FAM209BQ5JX69 171 aa12.88□□□□□ -0.35
HIF3A-211ENST00000528563 SPANXN2Q5MJ10 180 aa12.88□□□□□ -0.35
HIF3A-211ENST00000528563 IL34Q6ZMJ4 242 aa12.88□□□□□ -0.35
HIF3A-211ENST00000528563 OR4A16Q8NH70 328 aa12.88□□□□□ -0.35
HIF3A-211ENST00000528563 GLYATL2Q8WU03 294 aa12.88□□□□□ -0.35
HIF3A-211ENST00000528563 LSM10Q969L4 123 aaKnown RBP12.88□□□□□ -0.35
HIF3A-211ENST00000528563 HINT2Q9BX68 163 aa12.88□□□□□ -0.35
HIF3A-211ENST00000528563 TMEM222Q9H0R3 208 aa12.88□□□□□ -0.35
HIF3A-211ENST00000528563 A0A0B4J293 547 aa12.87□□□□□ -0.35
HIF3A-211ENST00000528563 SAP30O75446 220 aa12.87□□□□□ -0.35
HIF3A-211ENST00000528563 CDS2O95674 445 aa12.87□□□□□ -0.35
HIF3A-211ENST00000528563 SYNJ2BPP57105 145 aa12.87□□□□□ -0.35
HIF3A-211ENST00000528563 TMEM56Q96MV1 263 aa12.87□□□□□ -0.35
HIF3A-211ENST00000528563 ELOVL1Q9BW60 279 aa12.87□□□□□ -0.35
HIF3A-211ENST00000528563 MCUBQ9NWR8 336 aa12.87□□□□□ -0.35
HIF3A-211ENST00000528563 TEX13DA0A0J9YY54 714 aaPredicted RBP12.86□□□□□ -0.35
HIF3A-211ENST00000528563 CRYM-AS1A6NIL9 109 aa12.86□□□□□ -0.35
HIF3A-211ENST00000528563 ATG12O94817 140 aa12.86□□□□□ -0.35
HIF3A-211ENST00000528563 AP3S2P59780 193 aa12.86□□□□□ -0.35
HIF3A-211ENST00000528563 HSPE1P61604 102 aaKnown RBP12.86□□□□□ -0.35
HIF3A-211ENST00000528563 RPEL1Q2QD12 228 aa12.86□□□□□ -0.35
HIF3A-211ENST00000528563 TRIM16LQ309B1 348 aa12.86□□□□□ -0.35
HIF3A-211ENST00000528563 TOMM5Q8N4H5 51 aa12.86□□□□□ -0.35
HIF3A-211ENST00000528563 CCDC140Q96MF4 163 aa12.86□□□□□ -0.35
HIF3A-211ENST00000528563 SCGB3A2Q96PL1 93 aa12.86□□□□□ -0.35
HIF3A-211ENST00000528563 OR4C12Q96R67 309 aa12.86□□□□□ -0.35
HIF3A-211ENST00000528563 NAA60Q9H7X0 242 aa12.86□□□□□ -0.35
HIF3A-211ENST00000528563 S4R3C0 116 aa12.86□□□□□ -0.35
HIF3A-211ENST00000528563 OR5AC1P0C628 307 aa12.85□□□□□ -0.35
HIF3A-211ENST00000528563 MFAP2P55001 183 aa12.85□□□□□ -0.35
HIF3A-211ENST00000528563 TATDN3Q17R31 274 aa12.85□□□□□ -0.35
HIF3A-211ENST00000528563 OR9G4Q8NGQ1 327 aa12.85□□□□□ -0.35
HIF3A-211ENST00000528563 DEDD2Q8WXF8 326 aa12.85□□□□□ -0.35
HIF3A-211ENST00000528563 CXorf58Q96LI9 332 aa12.85□□□□□ -0.35
HIF3A-211ENST00000528563 SRRQ9GZT4 340 aa12.85□□□□□ -0.35
HIF3A-211ENST00000528563 THYN1Q9P016 225 aa12.85□□□□□ -0.35
HIF3A-211ENST00000528563 F11RQ9Y624 299 aaKnown RBP12.85□□□□□ -0.35
HIF3A-211ENST00000528563 TRBV7-1A0A0A6YYK4 115 aa12.85□□□□□ -0.35
HIF3A-211ENST00000528563 MFSD2BA6NFX1 497 aa12.85□□□□□ -0.35
HIF3A-211ENST00000528563 PPP5D1E7EU14 171 aa12.85□□□□□ -0.35
HIF3A-211ENST00000528563 IGHV3-23P01764 117 aa12.85□□□□□ -0.35
HIF3A-211ENST00000528563 FAUP35544 74 aaKnown RBP12.85□□□□□ -0.35
HIF3A-211ENST00000528563 PRCDQ00LT1 54 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms