RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 OR7C1O76099 320 aaPredicted RBP4.83□□□□□ -1.64
CD44-225ENST00000527326 LEPROTL1O95214 131 aa4.83□□□□□ -1.64
CD44-225ENST00000527326 APOMO95445 188 aa4.83□□□□□ -1.64
CD44-225ENST00000527326 CXorf1O96002 111 aa4.83□□□□□ -1.64
CD44-225ENST00000527326 NAPSAO96009 420 aa4.83□□□□□ -1.64
CD44-225ENST00000527326 IGKV1D-33P01593 117 aa4.83□□□□□ -1.64
CD44-225ENST00000527326 IGKV1-33P01594 117 aa4.83□□□□□ -1.64
CD44-225ENST00000527326 ASAH2BP0C7U1 165 aa4.83□□□□□ -1.64
CD44-225ENST00000527326 SRD5A1P18405 259 aa4.83□□□□□ -1.64
CD44-225ENST00000527326 EVI2AP22794 236 aa4.83□□□□□ -1.64
CD44-225ENST00000527326 G6PCP35575 357 aa4.83□□□□□ -1.64
CD44-225ENST00000527326 CFHR2P36980 270 aa4.83□□□□□ -1.64
CD44-225ENST00000527326 TAS2R45P59539 299 aa4.83□□□□□ -1.64
CD44-225ENST00000527326 POLR2LP62875 67 aaKnown RBP4.83□□□□□ -1.64
CD44-225ENST00000527326 SLC35B1P78383 322 aa4.83□□□□□ -1.64
CD44-225ENST00000527326 SRSF2Q01130 221 aaKnown RBP4.83□□□□□ -1.64
CD44-225ENST00000527326 RPL18Q07020 188 aaKnown RBP4.83□□□□□ -1.64
CD44-225ENST00000527326 SLC38A11Q08AI6 406 aa4.83□□□□□ -1.64
CD44-225ENST00000527326 PSG7Q13046 419 aa4.83□□□□□ -1.64
CD44-225ENST00000527326 GAGE13Q4V321 117 aa4.83□□□□□ -1.64
CD44-225ENST00000527326 PRR30Q53SZ7 412 aaPredicted RBP4.83□□□□□ -1.64
CD44-225ENST00000527326 FAM120AOSQ5T036 256 aa4.83□□□□□ -1.64
CD44-225ENST00000527326 FHL5Q5TD97 284 aa4.83□□□□□ -1.64
CD44-225ENST00000527326 LINC01545Q5VT33 79 aa4.83□□□□□ -1.64
CD44-225ENST00000527326 Q6AWC8 147 aa4.83□□□□□ -1.64
CD44-225ENST00000527326 TEPPQ6URK8 271 aa4.83□□□□□ -1.64
CD44-225ENST00000527326 MARCH3Q86UD3 253 aa4.83□□□□□ -1.64
CD44-225ENST00000527326 OR5AS1Q8N127 324 aa4.83□□□□□ -1.64
CD44-225ENST00000527326 RAB42Q8N4Z0 105 aa4.83□□□□□ -1.64
CD44-225ENST00000527326 SYT8Q8NBV8 401 aa4.83□□□□□ -1.64
CD44-225ENST00000527326 ZNF114Q8NC26 417 aa4.83□□□□□ -1.64
CD44-225ENST00000527326 OCC1Q8TAD7 63 aa4.83□□□□□ -1.64
CD44-225ENST00000527326 OSR1Q8TAX0 266 aaPredicted RBP4.83□□□□□ -1.64
CD44-225ENST00000527326 GATAD1Q8WUU5 269 aa4.83□□□□□ -1.64
CD44-225ENST00000527326 GTSF1Q8WW33 167 aa4.83□□□□□ -1.64
CD44-225ENST00000527326 C11orf52Q96A22 123 aa4.83□□□□□ -1.64
CD44-225ENST00000527326 TMEM147Q9BVK8 224 aa4.83□□□□□ -1.64
CD44-225ENST00000527326 PPDPFQ9H3Y8 114 aa4.83□□□□□ -1.64
CD44-225ENST00000527326 OR1A1Q9P1Q5 309 aa4.83□□□□□ -1.64
CD44-225ENST00000527326 SOX21Q9Y651 276 aaPredicted RBP4.83□□□□□ -1.64
CD44-225ENST00000527326 R4GN57 208 aa4.83□□□□□ -1.64
CD44-225ENST00000527326 TRIP12Q14669 1992 aaPredicted RBP4.82□□□□□ -1.64
CD44-225ENST00000527326 IGKV1D-42A0A075B6H8 117 aa4.82□□□□□ -1.64
CD44-225ENST00000527326 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.82□□□□□ -1.64
CD44-225ENST00000527326 KIR2DS1A0A191URI9 304 aa4.82□□□□□ -1.64
CD44-225ENST00000527326 TEX50A0A1B0GTY4 177 aa4.82□□□□□ -1.64
CD44-225ENST00000527326 UBE2L5PA0A1B0GUS4 154 aa4.82□□□□□ -1.64
CD44-225ENST00000527326 SMIM27A0A1W2PRY6 76 aa4.82□□□□□ -1.64
CD44-225ENST00000527326 FEZF1A0PJY2 475 aa4.82□□□□□ -1.64
CD44-225ENST00000527326 PRSS37A4D1T9 235 aa4.82□□□□□ -1.64
CD44-225ENST00000527326 NPIPB5A8MRT5 1133 aa4.82□□□□□ -1.64
CD44-225ENST00000527326 E9PLD3 99 aa4.82□□□□□ -1.64
CD44-225ENST00000527326 C11orf98E9PRG8 122 aa4.82□□□□□ -1.64
CD44-225ENST00000527326 K7EQS6 105 aa4.82□□□□□ -1.64
CD44-225ENST00000527326 SYNGR2O43760 224 aa4.82□□□□□ -1.64
CD44-225ENST00000527326 CEACAM4O75871 244 aa4.82□□□□□ -1.64
CD44-225ENST00000527326 NKX2-2O95096 273 aa4.82□□□□□ -1.64
CD44-225ENST00000527326 CFIP05156 583 aa4.82□□□□□ -1.64
CD44-225ENST00000527326 FGF6P10767 208 aa4.82□□□□□ -1.64
CD44-225ENST00000527326 IFITM1P13164 125 aa4.82□□□□□ -1.64
CD44-225ENST00000527326 PVRP15151 417 aa4.82□□□□□ -1.64
CD44-225ENST00000527326 ZNF823P16415 610 aa4.82□□□□□ -1.64
CD44-225ENST00000527326 GABRG2P18507 467 aa4.82□□□□□ -1.64
CD44-225ENST00000527326 TNFRSF1AP19438 455 aa4.82□□□□□ -1.64
CD44-225ENST00000527326 IGFBP6P24592 240 aaPredicted RBP4.82□□□□□ -1.64
CD44-225ENST00000527326 CD40P25942 277 aa4.82□□□□□ -1.64
CD44-225ENST00000527326 FCGR2BP31994 310 aaPredicted RBP4.82□□□□□ -1.64
CD44-225ENST00000527326 RPS27P42677 84 aaKnown RBP4.82□□□□□ -1.64
CD44-225ENST00000527326 EMDP50402 254 aa4.82□□□□□ -1.64
CD44-225ENST00000527326 XGP55808 180 aa4.82□□□□□ -1.64
CD44-225ENST00000527326 NDUFV3P56181 108 aaKnown RBP4.82□□□□□ -1.64
CD44-225ENST00000527326 RPL8P62917 257 aaKnown RBP4.82□□□□□ -1.64
CD44-225ENST00000527326 TLE1Q04724 770 aa4.82□□□□□ -1.64
CD44-225ENST00000527326 VGLL4Q14135 290 aa4.82□□□□□ -1.64
CD44-225ENST00000527326 LY6DQ14210 128 aa4.82□□□□□ -1.64
CD44-225ENST00000527326 WFDC2Q14508 124 aa4.82□□□□□ -1.64
CD44-225ENST00000527326 KIR2DS1Q14954 304 aa4.82□□□□□ -1.64
CD44-225ENST00000527326 ETDBQ3ZM63 59 aa4.82□□□□□ -1.64
CD44-225ENST00000527326 TIGITQ495A1 244 aa4.82□□□□□ -1.64
CD44-225ENST00000527326 CT83Q5H943 113 aa4.82□□□□□ -1.64
CD44-225ENST00000527326 LCE5AQ5TCM9 118 aa4.82□□□□□ -1.64
CD44-225ENST00000527326 PIP4P1Q86T03 277 aa4.82□□□□□ -1.64
CD44-225ENST00000527326 TBC1D26Q86UD7 250 aa4.82□□□□□ -1.64
CD44-225ENST00000527326 MOGAT3Q86VF5 341 aa4.82□□□□□ -1.64
CD44-225ENST00000527326 LRRC75A-AS1Q8N1F1 130 aa4.82□□□□□ -1.64
CD44-225ENST00000527326 TEX45Q8NA69 505 aa4.82□□□□□ -1.64
CD44-225ENST00000527326 OR9G1Q8NH87 305 aa4.82□□□□□ -1.64
CD44-225ENST00000527326 OR13C6PQ8NH95 151 aa4.82□□□□□ -1.64
CD44-225ENST00000527326 C16orf52Q8NHV5 167 aa4.82□□□□□ -1.64
CD44-225ENST00000527326 MRAPQ8TCY5 172 aa4.82□□□□□ -1.64
CD44-225ENST00000527326 BADQ92934 168 aa4.82□□□□□ -1.64
CD44-225ENST00000527326 RAB37Q96AX2 223 aa4.82□□□□□ -1.64
CD44-225ENST00000527326 NUS1Q96E22 293 aa4.82□□□□□ -1.64
CD44-225ENST00000527326 C16orf92Q96LL3 132 aa4.82□□□□□ -1.64
CD44-225ENST00000527326 OR4C12Q96R67 309 aa4.82□□□□□ -1.64
CD44-225ENST00000527326 PBOV1Q9GZY1 135 aa4.82□□□□□ -1.64
CD44-225ENST00000527326 R3HDMLQ9H3Y0 253 aa4.82□□□□□ -1.64
CD44-225ENST00000527326 HRASLS2Q9NWW9 162 aa4.82□□□□□ -1.64
CD44-225ENST00000527326 TP73-AS1Q9UF72 201 aa4.82□□□□□ -1.64
CD44-225ENST00000527326 MRPS17Q9Y2R5 130 aaKnown RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms