RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 NDUFA4L2Q9NRX3 87 aa7.86□□□□□ -1.15
PRPF40B-204ENST00000527253 TENM2Q9NT68 2774 aa7.86□□□□□ -1.15
PRPF40B-204ENST00000527253 TRBV7-1A0A0A6YYK4 115 aa7.85□□□□□ -1.15
PRPF40B-204ENST00000527253 IGHV3-35A0A0C4DH35 117 aa7.85□□□□□ -1.15
PRPF40B-204ENST00000527253 SMIM31A0A1B0GVY4 71 aa7.85□□□□□ -1.15
PRPF40B-204ENST00000527253 ZNF320A2RRD8 509 aa7.85□□□□□ -1.15
PRPF40B-204ENST00000527253 M0QYG6 137 aa7.85□□□□□ -1.15
PRPF40B-204ENST00000527253 SERPINE2P07093 398 aa7.85□□□□□ -1.15
PRPF40B-204ENST00000527253 OR13C7P0DN81 318 aa7.85□□□□□ -1.15
PRPF40B-204ENST00000527253 PTBP1P26599 531 aaKnown RBP eCLIP7.85□□□□□ -1.15
PRPF40B-204ENST00000527253 RCVRNP35243 200 aa7.85□□□□□ -1.15
PRPF40B-204ENST00000527253 CD81P60033 236 aa7.85□□□□□ -1.15
PRPF40B-204ENST00000527253 ERVK-16P61578 105 aa7.85□□□□□ -1.15
PRPF40B-204ENST00000527253 TSPAN5P62079 268 aa7.85□□□□□ -1.15
PRPF40B-204ENST00000527253 TM4SF20Q53R12 229 aa7.85□□□□□ -1.15
PRPF40B-204ENST00000527253 GPR107Q5VW38 600 aa7.85□□□□□ -1.15
PRPF40B-204ENST00000527253 TBC1D26Q86UD7 250 aa7.85□□□□□ -1.15
PRPF40B-204ENST00000527253 CADM3Q8N126 398 aa7.85□□□□□ -1.15
PRPF40B-204ENST00000527253 DEFB125Q8N687 156 aa7.85□□□□□ -1.15
PRPF40B-204ENST00000527253 GDPD1Q8N9F7 314 aa7.85□□□□□ -1.15
PRPF40B-204ENST00000527253 OR1L8Q8NGR8 309 aa7.85□□□□□ -1.15
PRPF40B-204ENST00000527253 DYNLRB2Q8TF09 96 aa7.85□□□□□ -1.15
PRPF40B-204ENST00000527253 BORCS5Q969J3 196 aa7.85□□□□□ -1.15
PRPF40B-204ENST00000527253 ZNF414Q96IQ9 312 aa7.85□□□□□ -1.15
PRPF40B-204ENST00000527253 CITED4Q96RK1 184 aa7.85□□□□□ -1.15
PRPF40B-204ENST00000527253 ABHD1Q96SE0 405 aa7.85□□□□□ -1.15
PRPF40B-204ENST00000527253 NEURL2Q9BR09 285 aa7.85□□□□□ -1.15
PRPF40B-204ENST00000527253 EDA2RQ9HAV5 297 aa7.85□□□□□ -1.15
PRPF40B-204ENST00000527253 PLEKHA3Q9HB20 300 aa7.85□□□□□ -1.15
PRPF40B-204ENST00000527253 RETNQ9HD89 108 aa7.85□□□□□ -1.15
PRPF40B-204ENST00000527253 KLK11Q9UBX7 282 aa7.85□□□□□ -1.15
PRPF40B-204ENST00000527253 MLXQ9UH92 298 aa7.85□□□□□ -1.15
PRPF40B-204ENST00000527253 OR51B2Q9Y5P1 312 aa7.85□□□□□ -1.15
PRPF40B-204ENST00000527253 IGHV3-21A0A0B4J1V1 117 aa7.84□□□□□ -1.15
PRPF40B-204ENST00000527253 RBMY1BA6NDE4 496 aaKnown RBP7.84□□□□□ -1.15
PRPF40B-204ENST00000527253 RBMY1EA6NEQ0 496 aaKnown RBP7.84□□□□□ -1.15
PRPF40B-204ENST00000527253 A8MWP6 167 aa7.84□□□□□ -1.15
PRPF40B-204ENST00000527253 FAM25AB3EWG3 89 aa7.84□□□□□ -1.15
PRPF40B-204ENST00000527253 FAM25CB3EWG5 89 aa7.84□□□□□ -1.15
PRPF40B-204ENST00000527253 FAM25GB3EWG6 89 aa7.84□□□□□ -1.15
PRPF40B-204ENST00000527253 F8W735 103 aaPredicted RBP7.84□□□□□ -1.15
PRPF40B-204ENST00000527253 RBMY1DP0C7P1 496 aaKnown RBP7.84□□□□□ -1.15
PRPF40B-204ENST00000527253 C8orf88P0DMB2 117 aa7.84□□□□□ -1.15
PRPF40B-204ENST00000527253 ZNF182P17025 639 aaPredicted RBP7.84□□□□□ -1.15
PRPF40B-204ENST00000527253 GPR183P32249 361 aa7.84□□□□□ -1.15
PRPF40B-204ENST00000527253 ALDH3B2P48448 385 aa7.84□□□□□ -1.15
PRPF40B-204ENST00000527253 UCP3P55916 312 aa7.84□□□□□ -1.15
PRPF40B-204ENST00000527253 FAM106AQ4KMX7 169 aa7.84□□□□□ -1.15
PRPF40B-204ENST00000527253 CASC10Q5T4H9 136 aa7.84□□□□□ -1.15
PRPF40B-204ENST00000527253 SLC25A24Q6NUK1 477 aa7.84□□□□□ -1.15
PRPF40B-204ENST00000527253 GTSCR1Q86UQ5 136 aa7.84□□□□□ -1.15
PRPF40B-204ENST00000527253 CMTM1Q8IZ96 169 aa7.84□□□□□ -1.15
PRPF40B-204ENST00000527253 TMEM61Q8N0U2 210 aa7.84□□□□□ -1.15
PRPF40B-204ENST00000527253 UXS1Q8NBZ7 420 aa7.84□□□□□ -1.15
PRPF40B-204ENST00000527253 OR52I2Q8NH67 350 aa7.84□□□□□ -1.15
PRPF40B-204ENST00000527253 VN1R17PQ8TDU5 208 aa7.84□□□□□ -1.15
PRPF40B-204ENST00000527253 SEC22AQ96IW7 307 aa7.84□□□□□ -1.15
PRPF40B-204ENST00000527253 CXorf58Q96LI9 332 aa7.84□□□□□ -1.15
PRPF40B-204ENST00000527253 HINT2Q9BX68 163 aa7.84□□□□□ -1.15
PRPF40B-204ENST00000527253 MIXL1Q9H2W2 232 aa7.84□□□□□ -1.15
PRPF40B-204ENST00000527253 TUBA4BQ9H853 241 aa7.84□□□□□ -1.15
PRPF40B-204ENST00000527253 TECRQ9NZ01 308 aaKnown RBP7.84□□□□□ -1.15
PRPF40B-204ENST00000527253 F11RQ9Y624 299 aaKnown RBP7.84□□□□□ -1.15
PRPF40B-204ENST00000527253 DNAH7Q8WXX0 4024 aa7.83□□□□□ -1.16
PRPF40B-204ENST00000527253 K7EIM0 57 aa7.83□□□□□ -1.16
PRPF40B-204ENST00000527253 TGOLN2O43493 480 aa7.83□□□□□ -1.16
PRPF40B-204ENST00000527253 PI3P19957 117 aa7.83□□□□□ -1.16
PRPF40B-204ENST00000527253 SPCS2Q15005 226 aa7.83□□□□□ -1.16
PRPF40B-204ENST00000527253 GUCA2BQ16661 112 aa7.83□□□□□ -1.16
PRPF40B-204ENST00000527253 IZUMO4Q1ZYL8 232 aa7.83□□□□□ -1.16
PRPF40B-204ENST00000527253 THOC7Q6I9Y2 204 aaKnown RBP7.83□□□□□ -1.16
PRPF40B-204ENST00000527253 LPCAT3Q6P1A2 487 aa7.83□□□□□ -1.16
PRPF40B-204ENST00000527253 LHFPL1Q86WI0 220 aa7.83□□□□□ -1.16
PRPF40B-204ENST00000527253 LAX1Q8IWV1 398 aa7.83□□□□□ -1.16
PRPF40B-204ENST00000527253 SLC38A6Q8IZM9 456 aa7.83□□□□□ -1.16
PRPF40B-204ENST00000527253 OR4D10Q8NGI6 311 aa7.83□□□□□ -1.16
PRPF40B-204ENST00000527253 SCARB1Q8WTV0 552 aa7.83□□□□□ -1.16
PRPF40B-204ENST00000527253 LSM10Q969L4 123 aaKnown RBP7.83□□□□□ -1.16
PRPF40B-204ENST00000527253 CHRDL1Q9BU40 450 aa7.83□□□□□ -1.16
PRPF40B-204ENST00000527253 ZNF436Q9C0F3 470 aaPredicted RBP7.83□□□□□ -1.16
PRPF40B-204ENST00000527253 FAM212BQ9NTI7 297 aaPredicted RBP7.83□□□□□ -1.16
PRPF40B-204ENST00000527253 TMEM14BQ9NUH8 114 aa7.83□□□□□ -1.16
PRPF40B-204ENST00000527253 EXTL2Q9UBQ6 330 aa7.83□□□□□ -1.16
PRPF40B-204ENST00000527253 PRNDQ9UKY0 176 aa7.83□□□□□ -1.16
PRPF40B-204ENST00000527253 RYR2Q92736 4967 aa7.82□□□□□ -1.16
PRPF40B-204ENST00000527253 OR2T8A6NH00 312 aa7.82□□□□□ -1.16
PRPF40B-204ENST00000527253 C15orf61A6NNL5 157 aa7.82□□□□□ -1.16
PRPF40B-204ENST00000527253 OR11H12B2RN74 326 aa7.82□□□□□ -1.16
PRPF40B-204ENST00000527253 CTDSP2O14595 271 aa7.82□□□□□ -1.16
PRPF40B-204ENST00000527253 SNAPC5O75971 98 aa7.82□□□□□ -1.16
PRPF40B-204ENST00000527253 TPPPO94811 219 aa7.82□□□□□ -1.16
PRPF40B-204ENST00000527253 CD3DP04234 171 aa7.82□□□□□ -1.16
PRPF40B-204ENST00000527253 ADMP35318 185 aa7.82□□□□□ -1.16
PRPF40B-204ENST00000527253 ZNF57Q68EA5 555 aaPredicted RBP7.82□□□□□ -1.16
PRPF40B-204ENST00000527253 MZT2AQ6P582 158 aa7.82□□□□□ -1.16
PRPF40B-204ENST00000527253 PLET1Q6UQ28 207 aa7.82□□□□□ -1.16
PRPF40B-204ENST00000527253 BTNL8Q6UX41 500 aa7.82□□□□□ -1.16
PRPF40B-204ENST00000527253 HSD17B13Q7Z5P4 300 aaPredicted RBP7.82□□□□□ -1.16
PRPF40B-204ENST00000527253 OR5B3Q8NH48 314 aa7.82□□□□□ -1.16
PRPF40B-204ENST00000527253 MRGPRFQ96AM1 343 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms