RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 DEDDO75618 318 aa4.94□□□□□ -1.62
CD44-221ENST00000526000 NDUFB8O95169 186 aa4.94□□□□□ -1.62
CD44-221ENST00000526000 SPDEFO95238 335 aa4.94□□□□□ -1.62
CD44-221ENST00000526000 CRYZL1O95825 349 aa4.94□□□□□ -1.62
CD44-221ENST00000526000 PMP2P02689 132 aa4.94□□□□□ -1.62
CD44-221ENST00000526000 RRASP10301 218 aa4.94□□□□□ -1.62
CD44-221ENST00000526000 IL7P13232 177 aa4.94□□□□□ -1.62
CD44-221ENST00000526000 KIR2DS2P43631 304 aa4.94□□□□□ -1.62
CD44-221ENST00000526000 RFX2P48378 723 aa4.94□□□□□ -1.62
CD44-221ENST00000526000 DEFA1P59665 94 aa4.94□□□□□ -1.62
CD44-221ENST00000526000 DEFA3P59666 94 aa4.94□□□□□ -1.62
CD44-221ENST00000526000 PRSS8Q16651 343 aa4.94□□□□□ -1.62
CD44-221ENST00000526000 OR2B11Q5JQS5 317 aa4.94□□□□□ -1.62
CD44-221ENST00000526000 ZNF57Q68EA5 555 aaPredicted RBP4.94□□□□□ -1.62
CD44-221ENST00000526000 CLEC19AQ6UXS0 136 aa4.94□□□□□ -1.62
CD44-221ENST00000526000 ZNF66Q6ZN08 573 aa4.94□□□□□ -1.62
CD44-221ENST00000526000 LHFPL1Q86WI0 220 aa4.94□□□□□ -1.62
CD44-221ENST00000526000 CMTM1Q8IZ96 169 aa4.94□□□□□ -1.62
CD44-221ENST00000526000 SLC38A6Q8IZM9 456 aa4.94□□□□□ -1.62
CD44-221ENST00000526000 VKORC1L1Q8N0U8 176 aa4.94□□□□□ -1.62
CD44-221ENST00000526000 RPP25LQ8N5L8 163 aaKnown RBP4.94□□□□□ -1.62
CD44-221ENST00000526000 OR4C16Q8NGL9 310 aa4.94□□□□□ -1.62
CD44-221ENST00000526000 ZFAND1Q8TCF1 268 aa4.94□□□□□ -1.62
CD44-221ENST00000526000 CD300LFQ8TDQ1 290 aa4.94□□□□□ -1.62
CD44-221ENST00000526000 SRSF12Q8WXF0 261 aaKnown RBP4.94□□□□□ -1.62
CD44-221ENST00000526000 LINC00476Q8WZB0 136 aa4.94□□□□□ -1.62
CD44-221ENST00000526000 FYTTD1Q96QD9 318 aaKnown RBP4.94□□□□□ -1.62
CD44-221ENST00000526000 TSC22D3Q99576 134 aa4.94□□□□□ -1.62
CD44-221ENST00000526000 SDHCQ99643 169 aaPredicted RBP4.94□□□□□ -1.62
CD44-221ENST00000526000 HSD17B10Q99714 261 aaKnown RBP4.94□□□□□ -1.62
CD44-221ENST00000526000 SLC25A21Q9BQT8 299 aaPredicted RBP4.94□□□□□ -1.62
CD44-221ENST00000526000 OVOL2Q9BRP0 275 aa4.94□□□□□ -1.62
CD44-221ENST00000526000 ZNF2Q9BSG1 426 aaPredicted RBP4.94□□□□□ -1.62
CD44-221ENST00000526000 FAM212BQ9NTI7 297 aaPredicted RBP4.94□□□□□ -1.62
CD44-221ENST00000526000 SIGLEC8Q9NYZ4 499 aa4.94□□□□□ -1.62
CD44-221ENST00000526000 COPZ2Q9P299 210 aa4.94□□□□□ -1.62
CD44-221ENST00000526000 LINC00473A8K010 186 aa4.93□□□□□ -1.62
CD44-221ENST00000526000 GPR31O00270 319 aa4.93□□□□□ -1.62
CD44-221ENST00000526000 UPK1BO75841 260 aa4.93□□□□□ -1.62
CD44-221ENST00000526000 OR2A4O95047 310 aa4.93□□□□□ -1.62
CD44-221ENST00000526000 MYOD1P15172 320 aa4.93□□□□□ -1.62
CD44-221ENST00000526000 CBLN1P23435 193 aa4.93□□□□□ -1.62
CD44-221ENST00000526000 NFYAP23511 347 aaPredicted RBP4.93□□□□□ -1.62
CD44-221ENST00000526000 UBE2MP61081 183 aaKnown RBP4.93□□□□□ -1.62
CD44-221ENST00000526000 RND3P61587 244 aa4.93□□□□□ -1.62
CD44-221ENST00000526000 CATR1Q13166 79 aa4.93□□□□□ -1.62
CD44-221ENST00000526000 CBX3Q13185 183 aa4.93□□□□□ -1.62
CD44-221ENST00000526000 ASAH1Q13510 395 aa4.93□□□□□ -1.62
CD44-221ENST00000526000 BAK1Q16611 211 aa4.93□□□□□ -1.62
CD44-221ENST00000526000 RTL8BQ17RB0 113 aa4.93□□□□□ -1.62
CD44-221ENST00000526000 VMA21Q3ZAQ7 101 aa4.93□□□□□ -1.62
CD44-221ENST00000526000 TM4SF20Q53R12 229 aa4.93□□□□□ -1.62
CD44-221ENST00000526000 TMEM177Q53S58 311 aa4.93□□□□□ -1.62
CD44-221ENST00000526000 MZT2BQ6NZ67 158 aa4.93□□□□□ -1.62
CD44-221ENST00000526000 CADM3Q8N126 398 aa4.93□□□□□ -1.62
CD44-221ENST00000526000 CCDC71LQ8N9Z2 235 aa4.93□□□□□ -1.62
CD44-221ENST00000526000 UXS1Q8NBZ7 420 aa4.93□□□□□ -1.62
CD44-221ENST00000526000 OR52B4Q8NGK2 314 aa4.93□□□□□ -1.62
CD44-221ENST00000526000 TMEM68Q96MH6 324 aa4.93□□□□□ -1.62
CD44-221ENST00000526000 AIFM2Q9BRQ8 373 aa4.93□□□□□ -1.62
CD44-221ENST00000526000 SLC5A7Q9GZV3 580 aa4.93□□□□□ -1.62
CD44-221ENST00000526000 ZNF430Q9H8G1 570 aaPredicted RBP4.93□□□□□ -1.62
CD44-221ENST00000526000 HRASLSQ9HDD0 168 aa4.93□□□□□ -1.62
CD44-221ENST00000526000 UBQLN2Q9UHD9 624 aa4.93□□□□□ -1.62
CD44-221ENST00000526000 FBXL7Q9UJT9 491 aa4.93□□□□□ -1.62
CD44-221ENST00000526000 PRELID3BQ9Y3B1 194 aa4.93□□□□□ -1.62
CD44-221ENST00000526000 LOC102724200A0A096LPH7 203 aaPredicted RBP4.92□□□□□ -1.62
CD44-221ENST00000526000 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.92□□□□□ -1.62
CD44-221ENST00000526000 E7EUB6 86 aa4.92□□□□□ -1.62
CD44-221ENST00000526000 M0QYG6 137 aa4.92□□□□□ -1.62
CD44-221ENST00000526000 RBFOX2O43251 390 aaKnown RBP eCLIP4.92□□□□□ -1.62
CD44-221ENST00000526000 LYRM1O43325 122 aa4.92□□□□□ -1.62
CD44-221ENST00000526000 FCGR3BO75015 233 aa4.92□□□□□ -1.62
CD44-221ENST00000526000 GGCTO75223 188 aaKnown RBP4.92□□□□□ -1.62
CD44-221ENST00000526000 ACTL6BO94805 426 aa4.92□□□□□ -1.62
CD44-221ENST00000526000 REG1AP05451 166 aa4.92□□□□□ -1.62
CD44-221ENST00000526000 CTSDP07339 412 aaPredicted RBP4.92□□□□□ -1.62
CD44-221ENST00000526000 ZNF735P0CB33 412 aa4.92□□□□□ -1.62
CD44-221ENST00000526000 RPA2P15927 270 aa4.92□□□□□ -1.62
CD44-221ENST00000526000 RPL35AP18077 110 aaKnown RBP4.92□□□□□ -1.62
CD44-221ENST00000526000 DUTP33316 252 aaKnown RBP4.92□□□□□ -1.62
CD44-221ENST00000526000 TAS2R31P59538 309 aa4.92□□□□□ -1.62
CD44-221ENST00000526000 TNFRSF9Q07011 255 aa4.92□□□□□ -1.62
CD44-221ENST00000526000 RBMS2Q15434 407 aaKnown RBP4.92□□□□□ -1.62
CD44-221ENST00000526000 C15orf32Q32M92 178 aa4.92□□□□□ -1.62
CD44-221ENST00000526000 ZNF585BQ52M93 769 aa4.92□□□□□ -1.62
CD44-221ENST00000526000 RNASE12Q5GAN4 147 aaKnown RBP4.92□□□□□ -1.62
CD44-221ENST00000526000 AADACL3Q5VUY0 350 aa4.92□□□□□ -1.62
CD44-221ENST00000526000 KCTD9Q7L273 389 aa4.92□□□□□ -1.62
CD44-221ENST00000526000 SSX9Q7RTT3 188 aa4.92□□□□□ -1.62
CD44-221ENST00000526000 SLC16A13Q7RTY0 426 aa4.92□□□□□ -1.62
CD44-221ENST00000526000 TMEM61Q8N0U2 210 aa4.92□□□□□ -1.62
CD44-221ENST00000526000 TEX45Q8NA69 505 aa4.92□□□□□ -1.62
CD44-221ENST00000526000 OR2K2Q8NGT1 345 aa4.92□□□□□ -1.62
CD44-221ENST00000526000 SECTM1Q8WVN6 248 aa4.92□□□□□ -1.62
CD44-221ENST00000526000 DDB2Q92466 427 aa4.92□□□□□ -1.62
CD44-221ENST00000526000 GPHA2Q96T91 129 aa4.92□□□□□ -1.62
CD44-221ENST00000526000 GGTLC1Q9BX51 225 aa4.92□□□□□ -1.62
CD44-221ENST00000526000 MCUBQ9NWR8 336 aa4.92□□□□□ -1.62
CD44-221ENST00000526000 MLXQ9UH92 298 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms