RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 TMEM222Q9H0R3 208 aa9.64□□□□□ -0.87
SMCO4-202ENST00000525141 SLA2Q9H6Q3 261 aa9.64□□□□□ -0.87
SMCO4-202ENST00000525141 KCNIP3Q9Y2W7 256 aa9.64□□□□□ -0.87
SMCO4-202ENST00000525141 NBEAL2Q6ZNJ1 2754 aa9.63□□□□□ -0.87
SMCO4-202ENST00000525141 HUWE1Q7Z6Z7 4374 aaKnown RBP9.63□□□□□ -0.87
SMCO4-202ENST00000525141 TRAV3A0A0B4J244 114 aa9.63□□□□□ -0.87
SMCO4-202ENST00000525141 TEX13DA0A0J9YY54 714 aaPredicted RBP9.63□□□□□ -0.87
SMCO4-202ENST00000525141 CRYM-AS1A6NIL9 109 aa9.63□□□□□ -0.87
SMCO4-202ENST00000525141 CENPXA8MT69 81 aa9.63□□□□□ -0.87
SMCO4-202ENST00000525141 E7EUB6 86 aa9.63□□□□□ -0.87
SMCO4-202ENST00000525141 LINC01619G3V211 115 aa9.63□□□□□ -0.87
SMCO4-202ENST00000525141 OVOL1O14753 267 aa9.63□□□□□ -0.87
SMCO4-202ENST00000525141 RBMXL2O75526 392 aaKnown RBP9.63□□□□□ -0.87
SMCO4-202ENST00000525141 SNAPC5O75971 98 aa9.63□□□□□ -0.87
SMCO4-202ENST00000525141 CDS2O95674 445 aa9.63□□□□□ -0.87
SMCO4-202ENST00000525141 IGKV1-39P01597 117 aa9.63□□□□□ -0.87
SMCO4-202ENST00000525141 IGKV1D-39P04432 117 aa9.63□□□□□ -0.87
SMCO4-202ENST00000525141 HSPB1P04792 205 aaKnown RBP9.63□□□□□ -0.87
SMCO4-202ENST00000525141 RPL27AP46776 148 aaKnown RBP9.63□□□□□ -0.87
SMCO4-202ENST00000525141 DHODHQ02127 395 aa9.63□□□□□ -0.87
SMCO4-202ENST00000525141 CD69Q07108 199 aa9.63□□□□□ -0.87
SMCO4-202ENST00000525141 H2BFWTQ7Z2G1 175 aa9.63□□□□□ -0.87
SMCO4-202ENST00000525141 SGPP2Q8IWX5 399 aa9.63□□□□□ -0.87
SMCO4-202ENST00000525141 TTC9CQ8N5M4 171 aa9.63□□□□□ -0.87
SMCO4-202ENST00000525141 GLYATL2Q8WU03 294 aa9.63□□□□□ -0.87
SMCO4-202ENST00000525141 GALNT14Q96FL9 552 aa9.63□□□□□ -0.87
SMCO4-202ENST00000525141 PHB2Q99623 299 aa9.63□□□□□ -0.87
SMCO4-202ENST00000525141 SRSF8Q9BRL6 282 aaKnown RBP9.63□□□□□ -0.87
SMCO4-202ENST00000525141 COMMD5Q9GZQ3 224 aa9.63□□□□□ -0.87
SMCO4-202ENST00000525141 NAA60Q9H7X0 242 aa9.63□□□□□ -0.87
SMCO4-202ENST00000525141 FKBP11Q9NYL4 201 aa9.63□□□□□ -0.87
SMCO4-202ENST00000525141 ZMAT5Q9UDW3 170 aaKnown RBP9.63□□□□□ -0.87
SMCO4-202ENST00000525141 TEX22C9J3V5 150 aa9.62□□□□□ -0.87
SMCO4-202ENST00000525141 OR5AC1P0C628 307 aa9.62□□□□□ -0.87
SMCO4-202ENST00000525141 OR9G9P0C7N8 305 aa9.62□□□□□ -0.87
SMCO4-202ENST00000525141 SMCPP49901 116 aaPredicted RBP9.62□□□□□ -0.87
SMCO4-202ENST00000525141 OR2B8PP59922 312 aa9.62□□□□□ -0.87
SMCO4-202ENST00000525141 RBMS2Q15434 407 aaKnown RBP9.62□□□□□ -0.87
SMCO4-202ENST00000525141 SP6Q3SY56 376 aa9.62□□□□□ -0.87
SMCO4-202ENST00000525141 C10orf55Q5SWW7 151 aa9.62□□□□□ -0.87
SMCO4-202ENST00000525141 LCE2AQ5TA79 106 aaPredicted RBP9.62□□□□□ -0.87
SMCO4-202ENST00000525141 THOC7Q6I9Y2 204 aaKnown RBP9.62□□□□□ -0.87
SMCO4-202ENST00000525141 ACSM6Q6P461 480 aa9.62□□□□□ -0.87
SMCO4-202ENST00000525141 SLC25A42Q86VD7 318 aa9.62□□□□□ -0.87
SMCO4-202ENST00000525141 ADAD2Q8NCV1 583 aaKnown RBP9.62□□□□□ -0.87
SMCO4-202ENST00000525141 ZNF256Q9Y2P7 627 aaPredicted RBP9.62□□□□□ -0.87
SMCO4-202ENST00000525141 TEX50A0A1B0GTY4 177 aa9.61□□□□□ -0.87
SMCO4-202ENST00000525141 A0A1B0GW64 132 aa9.61□□□□□ -0.87
SMCO4-202ENST00000525141 CGB1A6NKQ9 187 aa9.61□□□□□ -0.87
SMCO4-202ENST00000525141 TRGV3P03979 118 aa9.61□□□□□ -0.87
SMCO4-202ENST00000525141 AKR1C4P17516 323 aa9.61□□□□□ -0.87
SMCO4-202ENST00000525141 INSL3P51460 131 aa9.61□□□□□ -0.87
SMCO4-202ENST00000525141 TPPP2P59282 170 aa9.61□□□□□ -0.87
SMCO4-202ENST00000525141 ZNF846Q147U1 533 aa9.61□□□□□ -0.87
SMCO4-202ENST00000525141 TRIM16LQ309B1 348 aa9.61□□□□□ -0.87
SMCO4-202ENST00000525141 TMEM128Q5BJH2 165 aa9.61□□□□□ -0.87
SMCO4-202ENST00000525141 IL34Q6ZMJ4 242 aa9.61□□□□□ -0.87
SMCO4-202ENST00000525141 ZNF429Q86V71 674 aa9.61□□□□□ -0.87
SMCO4-202ENST00000525141 OR1L8Q8NGR8 309 aa9.61□□□□□ -0.87
SMCO4-202ENST00000525141 TMEM230Q96A57 120 aa9.61□□□□□ -0.87
SMCO4-202ENST00000525141 TMEM56Q96MV1 263 aa9.61□□□□□ -0.87
SMCO4-202ENST00000525141 FYTTD1Q96QD9 318 aaKnown RBP9.61□□□□□ -0.87
SMCO4-202ENST00000525141 ASCL2Q99929 193 aa9.61□□□□□ -0.87
SMCO4-202ENST00000525141 TMEM14BQ9NUH8 114 aa9.61□□□□□ -0.87
SMCO4-202ENST00000525141 PRNDQ9UKY0 176 aa9.61□□□□□ -0.87
SMCO4-202ENST00000525141 ZNF257Q9Y2Q1 563 aa9.61□□□□□ -0.87
SMCO4-202ENST00000525141 TMEM56-RWDD3S4R434 201 aa9.61□□□□□ -0.87
SMCO4-202ENST00000525141 PIGBOS1A0A0B4J2F0 54 aa9.6□□□□□ -0.87
SMCO4-202ENST00000525141 A0A0G2JLM5 398 aa9.6□□□□□ -0.87
SMCO4-202ENST00000525141 HMX3A6NHT5 357 aa9.6□□□□□ -0.87
SMCO4-202ENST00000525141 C15orf61A6NNL5 157 aa9.6□□□□□ -0.87
SMCO4-202ENST00000525141 NPIPB5A8MRT5 1133 aa9.6□□□□□ -0.87
SMCO4-202ENST00000525141 PLA2G10O15496 165 aa9.6□□□□□ -0.87
SMCO4-202ENST00000525141 NDUFB6O95139 128 aa9.6□□□□□ -0.87
SMCO4-202ENST00000525141 IGKV1-5P01602 117 aa9.6□□□□□ -0.87
SMCO4-202ENST00000525141 CRYGCP07315 174 aa9.6□□□□□ -0.87
SMCO4-202ENST00000525141 P0C879 139 aa9.6□□□□□ -0.87
SMCO4-202ENST00000525141 TRAPPC2P0DI81 140 aa9.6□□□□□ -0.87
SMCO4-202ENST00000525141 TRAPPC2BP0DI82 140 aa9.6□□□□□ -0.87
SMCO4-202ENST00000525141 APELAP0DMC3 54 aa9.6□□□□□ -0.87
SMCO4-202ENST00000525141 SPNP16150 400 aa9.6□□□□□ -0.87
SMCO4-202ENST00000525141 CCR6P51684 374 aa9.6□□□□□ -0.87
SMCO4-202ENST00000525141 SUPT4H1P63272 117 aaKnown RBP9.6□□□□□ -0.87
SMCO4-202ENST00000525141 DEFA5Q01523 94 aa9.6□□□□□ -0.87
SMCO4-202ENST00000525141 TMEM187Q14656 261 aa9.6□□□□□ -0.87
SMCO4-202ENST00000525141 KLK9Q2XQG4 91 aa9.6□□□□□ -0.87
SMCO4-202ENST00000525141 HSD17B13Q7Z5P4 300 aaPredicted RBP9.6□□□□□ -0.87
SMCO4-202ENST00000525141 FAM219AQ8IW50 185 aa9.6□□□□□ -0.87
SMCO4-202ENST00000525141 OR5B3Q8NH48 314 aa9.6□□□□□ -0.87
SMCO4-202ENST00000525141 OR4A16Q8NH70 328 aa9.6□□□□□ -0.87
SMCO4-202ENST00000525141 RBPMSQ93062 196 aaKnown RBP9.6□□□□□ -0.87
SMCO4-202ENST00000525141 IL22RA2Q969J5 263 aa9.6□□□□□ -0.87
SMCO4-202ENST00000525141 RRNAD1Q96FB5 475 aaKnown RBP9.6□□□□□ -0.87
SMCO4-202ENST00000525141 QTRT1Q9BXR0 403 aaKnown RBP9.6□□□□□ -0.87
SMCO4-202ENST00000525141 WDR12Q9GZL7 423 aaKnown RBP9.6□□□□□ -0.87
SMCO4-202ENST00000525141 NDUFA4L2Q9NRX3 87 aa9.6□□□□□ -0.87
SMCO4-202ENST00000525141 ZNF355PQ9NSJ1 428 aa9.6□□□□□ -0.87
SMCO4-202ENST00000525141 COA4Q9NYJ1 87 aa9.6□□□□□ -0.87
SMCO4-202ENST00000525141 KLK9Q9UKQ9 250 aa9.6□□□□□ -0.87
SMCO4-202ENST00000525141 OR51B2Q9Y5P1 312 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms