RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 CLCF1Q9UBD9 225 aa6.45□□□□□ -1.38
SPIDR-223ENST00000524033 CLN8Q9UBY8 286 aa6.45□□□□□ -1.38
SPIDR-223ENST00000524033 TRAPPC2LQ9UL33 140 aa6.45□□□□□ -1.38
SPIDR-223ENST00000524033 FUT9Q9Y231 359 aa6.45□□□□□ -1.38
SPIDR-223ENST00000524033 PXMP4Q9Y6I8 212 aa6.45□□□□□ -1.38
SPIDR-223ENST00000524033 PCNX1Q96RV3 2341 aa6.45□□□□□ -1.38
SPIDR-223ENST00000524033 USF3Q68DE3 2245 aa6.44□□□□□ -1.38
SPIDR-223ENST00000524033 A0A1W2PPQ1 181 aa6.44□□□□□ -1.38
SPIDR-223ENST00000524033 TMEM210A6NLX4 147 aa6.44□□□□□ -1.38
SPIDR-223ENST00000524033 FAM90A9PA6NNJ1 464 aa6.44□□□□□ -1.38
SPIDR-223ENST00000524033 C17orf98A8MV24 154 aa6.44□□□□□ -1.38
SPIDR-223ENST00000524033 C12orf77C9JDV5 145 aa6.44□□□□□ -1.38
SPIDR-223ENST00000524033 SH2D1BO14796 132 aa6.44□□□□□ -1.38
SPIDR-223ENST00000524033 PDE6DO43924 150 aa6.44□□□□□ -1.38
SPIDR-223ENST00000524033 YPEL1O60688 119 aa6.44□□□□□ -1.38
SPIDR-223ENST00000524033 RAMP3O60896 148 aa6.44□□□□□ -1.38
SPIDR-223ENST00000524033 HAND1O96004 215 aa6.44□□□□□ -1.38
SPIDR-223ENST00000524033 OR4A8P0C604 315 aa6.44□□□□□ -1.38
SPIDR-223ENST00000524033 TUBG1P23258 451 aa6.44□□□□□ -1.38
SPIDR-223ENST00000524033 G6PCP35575 357 aa6.44□□□□□ -1.38
SPIDR-223ENST00000524033 UBE2NP61088 152 aaKnown RBP6.44□□□□□ -1.38
SPIDR-223ENST00000524033 YPEL3P61236 119 aaPredicted RBP6.44□□□□□ -1.38
SPIDR-223ENST00000524033 CATR1Q13166 79 aa6.44□□□□□ -1.38
SPIDR-223ENST00000524033 HNF4GQ14541 408 aa6.44□□□□□ -1.38
SPIDR-223ENST00000524033 PRSS8Q16651 343 aa6.44□□□□□ -1.38
SPIDR-223ENST00000524033 KCNIP4Q6PIL6 250 aa6.44□□□□□ -1.38
SPIDR-223ENST00000524033 MYPOPQ86VE0 399 aaPredicted RBP6.44□□□□□ -1.38
SPIDR-223ENST00000524033 WDR31Q8NA23 367 aa6.44□□□□□ -1.38
SPIDR-223ENST00000524033 OR10P1Q8NGE3 313 aa6.44□□□□□ -1.38
SPIDR-223ENST00000524033 UBALD1Q8TB05 177 aa6.44□□□□□ -1.38
SPIDR-223ENST00000524033 DTD1Q8TEA8 209 aa6.44□□□□□ -1.38
SPIDR-223ENST00000524033 FAM216AQ8WUB2 273 aa6.44□□□□□ -1.38
SPIDR-223ENST00000524033 C11orf52Q96A22 123 aa6.44□□□□□ -1.38
SPIDR-223ENST00000524033 COQ2Q96H96 371 aa6.44□□□□□ -1.38
SPIDR-223ENST00000524033 WFIKKN1Q96NZ8 548 aa6.44□□□□□ -1.38
SPIDR-223ENST00000524033 YPEL2Q96QA6 119 aa6.44□□□□□ -1.38
SPIDR-223ENST00000524033 TXNDC17Q9BRA2 123 aa6.44□□□□□ -1.38
SPIDR-223ENST00000524033 OR2D2Q9H210 308 aa6.44□□□□□ -1.38
SPIDR-223ENST00000524033 ELOVL5Q9NYP7 299 aa6.44□□□□□ -1.38
SPIDR-223ENST00000524033 DOCK11Q5JSL3 2073 aa6.43□□□□□ -1.38
SPIDR-223ENST00000524033 OOEPA6NGQ2 149 aa6.43□□□□□ -1.38
SPIDR-223ENST00000524033 C22orf46C9J442 243 aa6.43□□□□□ -1.38
SPIDR-223ENST00000524033 C11orf94C9JXX5 98 aa6.43□□□□□ -1.38
SPIDR-223ENST00000524033 C17orf112F2Z3M2 114 aa6.43□□□□□ -1.38
SPIDR-223ENST00000524033 C16orf97H3BN30 126 aa6.43□□□□□ -1.38
SPIDR-223ENST00000524033 PSPNO60542 156 aa6.43□□□□□ -1.38
SPIDR-223ENST00000524033 CGAP01215 116 aa6.43□□□□□ -1.38
SPIDR-223ENST00000524033 HBZP02008 142 aa6.43□□□□□ -1.38
SPIDR-223ENST00000524033 BTF3P20290 206 aaKnown RBP6.43□□□□□ -1.38
SPIDR-223ENST00000524033 RAB4AP20338 218 aa6.43□□□□□ -1.38
SPIDR-223ENST00000524033 VDAC2P45880 294 aaPredicted RBP6.43□□□□□ -1.38
SPIDR-223ENST00000524033 OR3A1P47881 315 aa6.43□□□□□ -1.38
SPIDR-223ENST00000524033 ATP5G3P48201 142 aa6.43□□□□□ -1.38
SPIDR-223ENST00000524033 LINC00310P59036 64 aa6.43□□□□□ -1.38
SPIDR-223ENST00000524033 FOXL1Q12952 345 aa6.43□□□□□ -1.38
SPIDR-223ENST00000524033 ZNF124Q15973 351 aa6.43□□□□□ -1.38
SPIDR-223ENST00000524033 IQCJQ1A5X6 159 aa6.43□□□□□ -1.38
SPIDR-223ENST00000524033 ZNF718Q3SXZ3 478 aa6.43□□□□□ -1.38
SPIDR-223ENST00000524033 FAM78BQ5VT40 261 aa6.43□□□□□ -1.38
SPIDR-223ENST00000524033 VWA1Q6PCB0 445 aa6.43□□□□□ -1.38
SPIDR-223ENST00000524033 TEX38Q6PEX7 206 aa6.43□□□□□ -1.38
SPIDR-223ENST00000524033 ZNF474Q6S9Z5 364 aaPredicted RBP6.43□□□□□ -1.38
SPIDR-223ENST00000524033 WFDC3Q8IUB2 231 aa6.43□□□□□ -1.38
SPIDR-223ENST00000524033 C11orf53Q8IXP5 236 aa6.43□□□□□ -1.38
SPIDR-223ENST00000524033 ZNF114Q8NC26 417 aa6.43□□□□□ -1.38
SPIDR-223ENST00000524033 OR52L2PQ8NGH6 319 aa6.43□□□□□ -1.38
SPIDR-223ENST00000524033 SNHG12Q9BXW3 62 aa6.43□□□□□ -1.38
SPIDR-223ENST00000524033 OPN3Q9H1Y3 402 aaPredicted RBP6.43□□□□□ -1.38
SPIDR-223ENST00000524033 BEX4Q9NWD9 120 aaPredicted RBP6.43□□□□□ -1.38
SPIDR-223ENST00000524033 TP53TG3Q9ULZ0 132 aa6.43□□□□□ -1.38
SPIDR-223ENST00000524033 DNHD1Q96M86 4753 aa6.43□□□□□ -1.38
SPIDR-223ENST00000524033 ANKHD1Q8IWZ3 2542 aaKnown RBP6.42□□□□□ -1.38
SPIDR-223ENST00000524033 TRBV20OR9-2A0A075B6H5 130 aa6.42□□□□□ -1.38
SPIDR-223ENST00000524033 A0A1B0GWJ7 208 aa6.42□□□□□ -1.38
SPIDR-223ENST00000524033 LINC00473A8K010 186 aa6.42□□□□□ -1.38
SPIDR-223ENST00000524033 C15orf65H3BRN8 121 aa6.42□□□□□ -1.38
SPIDR-223ENST00000524033 IFNL4K9M1U5 179 aa6.42□□□□□ -1.38
SPIDR-223ENST00000524033 TCAPO15273 167 aa6.42□□□□□ -1.38
SPIDR-223ENST00000524033 HMGB3O15347 200 aaKnown RBP6.42□□□□□ -1.38
SPIDR-223ENST00000524033 RBFOX2O43251 390 aaKnown RBP eCLIP6.42□□□□□ -1.38
SPIDR-223ENST00000524033 MPDU1O75352 247 aa6.42□□□□□ -1.38
SPIDR-223ENST00000524033 NXPH2O95156 264 aa6.42□□□□□ -1.38
SPIDR-223ENST00000524033 OR9G9P0C7N8 305 aa6.42□□□□□ -1.38
SPIDR-223ENST00000524033 STAG3L2P0CL84 134 aa6.42□□□□□ -1.38
SPIDR-223ENST00000524033 STAG3L3P0CL85 134 aa6.42□□□□□ -1.38
SPIDR-223ENST00000524033 CD1BP29016 333 aa6.42□□□□□ -1.38
SPIDR-223ENST00000524033 OPRK1P41145 380 aa6.42□□□□□ -1.38
SPIDR-223ENST00000524033 IDH3GP51553 393 aaPredicted RBP6.42□□□□□ -1.38
SPIDR-223ENST00000524033 ERVFC1-1P60608 527 aa6.42□□□□□ -1.38
SPIDR-223ENST00000524033 ZNF816Q0VGE8 651 aaPredicted RBP6.42□□□□□ -1.38
SPIDR-223ENST00000524033 TBC1D28Q2M2D7 210 aa6.42□□□□□ -1.38
SPIDR-223ENST00000524033 ALKBH6Q3KRA9 238 aa6.42□□□□□ -1.38
SPIDR-223ENST00000524033 KRTAP21-3Q3LHN1 58 aa6.42□□□□□ -1.38
SPIDR-223ENST00000524033 FAM53AQ6NSI3 398 aaPredicted RBP6.42□□□□□ -1.38
SPIDR-223ENST00000524033 BTNL3Q6UXE8 466 aa6.42□□□□□ -1.38
SPIDR-223ENST00000524033 TEX43Q6ZNM6 134 aa6.42□□□□□ -1.38
SPIDR-223ENST00000524033 TGIF2LXQ8IUE1 241 aa6.42□□□□□ -1.38
SPIDR-223ENST00000524033 WFDC11Q8NEX6 87 aa6.42□□□□□ -1.38
SPIDR-223ENST00000524033 OR10G8Q8NGN5 311 aa6.42□□□□□ -1.38
SPIDR-223ENST00000524033 OR52E5Q8NH55 327 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms