RNA–Protein interactions for RNA: ENST00000523699.5

CDK16-222, Transcript of cyclin dependent kinase 16, human

TSL 5

Gene CDK16, Length 675 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK16-222	ENST00000523699	TRAPPC2	P0DI81	140 aa		11.76	□□□□□ -0.53
CDK16-222	ENST00000523699	TRAPPC2B	P0DI82	140 aa		11.76	□□□□□ -0.53
CDK16-222	ENST00000523699	PTBP1	P26599	531 aa	Known RBP eCLIP	11.76	□□□□□ -0.53
CDK16-222	ENST00000523699	KCTD21	Q4G0X4	260 aa		11.76	□□□□□ -0.53
CDK16-222	ENST00000523699	TM4SF20	Q53R12	229 aa		11.76	□□□□□ -0.53
CDK16-222	ENST00000523699	UBE2NL	Q5JXB2	153 aa		11.76	□□□□□ -0.53
CDK16-222	ENST00000523699	TMEM69	Q5SWH9	247 aa		11.76	□□□□□ -0.53
CDK16-222	ENST00000523699	SLC38A6	Q8IZM9	456 aa		11.76	□□□□□ -0.53
CDK16-222	ENST00000523699	VN1R17P	Q8TDU5	208 aa		11.76	□□□□□ -0.53
CDK16-222	ENST00000523699	VCX3A	Q9NNX9	186 aa		11.76	□□□□□ -0.53
CDK16-222	ENST00000523699	SELENOK	Q9Y6D0	94 aa		11.76	□□□□□ -0.53
CDK16-222	ENST00000523699	STARD9	Q9P2P6	4700 aa		11.75	□□□□□ -0.53
CDK16-222	ENST00000523699	TRAV3	A0A0B4J244	114 aa		11.75	□□□□□ -0.53
CDK16-222	ENST00000523699	MARCH11	A6NNE9	402 aa		11.75	□□□□□ -0.53
CDK16-222	ENST00000523699	TGOLN2	O43493	480 aa		11.75	□□□□□ -0.53
CDK16-222	ENST00000523699	SNAPC5	O75971	98 aa		11.75	□□□□□ -0.53
CDK16-222	ENST00000523699	OR13C7	P0DN81	318 aa		11.75	□□□□□ -0.53
CDK16-222	ENST00000523699	RPA2	P15927	270 aa		11.75	□□□□□ -0.53
CDK16-222	ENST00000523699	F2R	P25116	425 aa		11.75	□□□□□ -0.53
CDK16-222	ENST00000523699	S100G	P29377	79 aa		11.75	□□□□□ -0.53
CDK16-222	ENST00000523699	ZNF585B	Q52M93	769 aa		11.75	□□□□□ -0.53
CDK16-222	ENST00000523699	UNQ9165/PRO28630	Q6UXU0	137 aa		11.75	□□□□□ -0.53
CDK16-222	ENST00000523699	OR1L8	Q8NGR8	309 aa		11.75	□□□□□ -0.53
CDK16-222	ENST00000523699	OR5H2	Q8NGV7	314 aa		11.75	□□□□□ -0.53
CDK16-222	ENST00000523699	LSM10	Q969L4	123 aa	Known RBP	11.75	□□□□□ -0.53
CDK16-222	ENST00000523699	ZNF2	Q9BSG1	426 aa	Predicted RBP	11.75	□□□□□ -0.53
CDK16-222	ENST00000523699	HINT2	Q9BX68	163 aa		11.75	□□□□□ -0.53
CDK16-222	ENST00000523699	LAMTOR1	Q6IAA8	161 aa		11.74	□□□□□ -0.53
CDK16-222	ENST00000523699	SLC25A24	Q6NUK1	477 aa		11.74	□□□□□ -0.53
CDK16-222	ENST00000523699	SAMD12	Q8N8I0	201 aa		11.74	□□□□□ -0.53
CDK16-222	ENST00000523699	OR10W1	Q8NGF6	305 aa		11.74	□□□□□ -0.53
CDK16-222	ENST00000523699	TMEM190	Q8WZ59	177 aa		11.74	□□□□□ -0.53
CDK16-222	ENST00000523699	MOB3A	Q96BX8	217 aa		11.74	□□□□□ -0.53
CDK16-222	ENST00000523699	BSCL2	Q96G97	398 aa	Predicted RBP	11.74	□□□□□ -0.53
CDK16-222	ENST00000523699	SPAG8	Q99932	426 aa	Predicted RBP	11.74	□□□□□ -0.53
CDK16-222	ENST00000523699	DAZ1	Q9NQZ3	744 aa	Known RBP	11.74	□□□□□ -0.53
CDK16-222	ENST00000523699	IGHV3-35	A0A0C4DH35	117 aa		11.73	□□□□□ -0.53
CDK16-222	ENST00000523699	SERPINE2	P07093	398 aa		11.73	□□□□□ -0.53
CDK16-222	ENST00000523699	C8orf88	P0DMB2	117 aa		11.73	□□□□□ -0.53
CDK16-222	ENST00000523699	GNRHR	P30968	328 aa		11.73	□□□□□ -0.53
CDK16-222	ENST00000523699	APOC4	P55056	127 aa		11.73	□□□□□ -0.53
CDK16-222	ENST00000523699	TAS2R20	P59543	309 aa		11.73	□□□□□ -0.53
CDK16-222	ENST00000523699	SPSB3	Q6PJ21	355 aa		11.73	□□□□□ -0.53
CDK16-222	ENST00000523699	OR2C3	Q8N628	320 aa		11.73	□□□□□ -0.53
CDK16-222	ENST00000523699	OR6F1	Q8NGZ6	308 aa		11.73	□□□□□ -0.53
CDK16-222	ENST00000523699	TMEM56	Q96MV1	263 aa		11.73	□□□□□ -0.53
CDK16-222	ENST00000523699	ATP6V0B	Q99437	205 aa		11.73	□□□□□ -0.53
CDK16-222	ENST00000523699	TSC22D3	Q99576	134 aa		11.73	□□□□□ -0.53
CDK16-222	ENST00000523699	ZNF436	Q9C0F3	470 aa	Predicted RBP	11.73	□□□□□ -0.53
CDK16-222	ENST00000523699	C5orf66	Q9H5L9	145 aa		11.73	□□□□□ -0.53
CDK16-222	ENST00000523699	PRND	Q9UKY0	176 aa		11.73	□□□□□ -0.53
CDK16-222	ENST00000523699	TEX50	A0A1B0GTY4	177 aa		11.72	□□□□□ -0.53
CDK16-222	ENST00000523699	OR2T8	A6NH00	312 aa		11.72	□□□□□ -0.53
CDK16-222	ENST00000523699	PGLYRP1	O75594	196 aa	Predicted RBP	11.72	□□□□□ -0.53
CDK16-222	ENST00000523699	KRAS	P01116	189 aa		11.72	□□□□□ -0.53
CDK16-222	ENST00000523699	PMP2	P02689	132 aa		11.72	□□□□□ -0.53
CDK16-222	ENST00000523699	LPAR6	P43657	344 aa		11.72	□□□□□ -0.53
CDK16-222	ENST00000523699	RFX2	P48378	723 aa		11.72	□□□□□ -0.53
CDK16-222	ENST00000523699	WT1-AS	Q06250	92 aa		11.72	□□□□□ -0.53
CDK16-222	ENST00000523699	DHRS11	Q6UWP2	260 aa		11.72	□□□□□ -0.53
CDK16-222	ENST00000523699	UBAC2	Q8NBM4	344 aa		11.72	□□□□□ -0.53
CDK16-222	ENST00000523699	DGCR14	Q96DF8	476 aa	Known RBP	11.72	□□□□□ -0.53
CDK16-222	ENST00000523699	C20orf24	Q9BUV8	137 aa		11.72	□□□□□ -0.53
CDK16-222	ENST00000523699	FKBP11	Q9NYL4	201 aa		11.72	□□□□□ -0.53
CDK16-222	ENST00000523699	C21orf62	Q9NYP8	219 aa		11.72	□□□□□ -0.53
CDK16-222	ENST00000523699	OR51B2	Q9Y5P1	312 aa		11.72	□□□□□ -0.53
CDK16-222	ENST00000523699	F11R	Q9Y624	299 aa	Known RBP	11.72	□□□□□ -0.53
CDK16-222	ENST00000523699	DNAH1	Q9P2D7	4330 aa		11.72	□□□□□ -0.53
CDK16-222	ENST00000523699	OR4C46	A6NHA9	309 aa		11.71	□□□□□ -0.53
CDK16-222	ENST00000523699	GPR31	O00270	319 aa		11.71	□□□□□ -0.53
CDK16-222	ENST00000523699	NDUFA4	O00483	81 aa		11.71	□□□□□ -0.53
CDK16-222	ENST00000523699	PRSS3	P35030	304 aa		11.71	□□□□□ -0.53
CDK16-222	ENST00000523699		Q56UQ5	140 aa		11.71	□□□□□ -0.53
CDK16-222	ENST00000523699	OR5B3	Q8NH48	314 aa		11.71	□□□□□ -0.53
CDK16-222	ENST00000523699	FCAMR	Q8WWV6	532 aa		11.71	□□□□□ -0.53
CDK16-222	ENST00000523699	FXYD6	Q9H0Q3	95 aa		11.71	□□□□□ -0.53
CDK16-222	ENST00000523699	NDUFA4L2	Q9NRX3	87 aa		11.71	□□□□□ -0.53
CDK16-222	ENST00000523699	ANAPC10	Q9UM13	185 aa		11.71	□□□□□ -0.53
CDK16-222	ENST00000523699	CSMD3	Q7Z407	3707 aa		11.71	□□□□□ -0.54
CDK16-222	ENST00000523699	TSPAN4	O14817	238 aa		11.7	□□□□□ -0.54
CDK16-222	ENST00000523699	G6PC	P35575	357 aa		11.7	□□□□□ -0.54
CDK16-222	ENST00000523699	TSPAN5	P62079	268 aa		11.7	□□□□□ -0.54
CDK16-222	ENST00000523699	LPCAT3	Q6P1A2	487 aa		11.7	□□□□□ -0.54
CDK16-222	ENST00000523699	CADM3	Q8N126	398 aa		11.7	□□□□□ -0.54
CDK16-222	ENST00000523699	SMIM31	A0A1B0GVY4	71 aa		11.69	□□□□□ -0.54
CDK16-222	ENST00000523699	CXorf65	A6NEN9	183 aa		11.69	□□□□□ -0.54
CDK16-222	ENST00000523699	NAT1	P18440	290 aa		11.69	□□□□□ -0.54
CDK16-222	ENST00000523699	HRH1	P35367	487 aa		11.69	□□□□□ -0.54
CDK16-222	ENST00000523699	REL	Q04864	619 aa	Predicted RBP	11.69	□□□□□ -0.54
CDK16-222	ENST00000523699	OVOL2	Q9BRP0	275 aa		11.69	□□□□□ -0.54
CDK16-222	ENST00000523699	C6orf62	Q9GZU0	229 aa	Predicted RBP	11.69	□□□□□ -0.54
CDK16-222	ENST00000523699	TP53TG1	Q9Y2A0	90 aa		11.69	□□□□□ -0.54
CDK16-222	ENST00000523699	NSG2	Q9Y328	171 aa		11.69	□□□□□ -0.54
CDK16-222	ENST00000523699	LYST	Q99698	3801 aa		11.69	□□□□□ -0.54
CDK16-222	ENST00000523699	IGHV3-21	A0A0B4J1V1	117 aa		11.68	□□□□□ -0.54
CDK16-222	ENST00000523699	C15orf61	A6NNL5	157 aa		11.68	□□□□□ -0.54
CDK16-222	ENST00000523699	UBE2C	O00762	179 aa		11.68	□□□□□ -0.54
CDK16-222	ENST00000523699	NUPL2	O15504	423 aa	Known RBP	11.68	□□□□□ -0.54
CDK16-222	ENST00000523699	HLA-DMA	P28067	261 aa		11.68	□□□□□ -0.54
CDK16-222	ENST00000523699	BMI1	P35226	326 aa		11.68	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms