RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 C11orf68Q9H3H3 251 aaKnown RBP16.69■□□□□ 0.26
PVT1-218ENST00000523328 IGHV3OR16-8A0A075B7F1 116 aa16.68■□□□□ 0.26
PVT1-218ENST00000523328 F8W735 103 aaPredicted RBP16.68■□□□□ 0.26
PVT1-218ENST00000523328 K7EMT4 169 aa16.68■□□□□ 0.26
PVT1-218ENST00000523328 TAS2R31P59538 309 aa16.68■□□□□ 0.26
PVT1-218ENST00000523328 RBMS2Q15434 407 aaKnown RBP16.68■□□□□ 0.26
PVT1-218ENST00000523328 SPSB3Q6PJ21 355 aa16.68■□□□□ 0.26
PVT1-218ENST00000523328 SECTM1Q8WVN6 248 aa16.68■□□□□ 0.26
PVT1-218ENST00000523328 C20orf24Q9BUV8 137 aa16.68■□□□□ 0.26
PVT1-218ENST00000523328 QTRT1Q9BXR0 403 aaKnown RBP16.68■□□□□ 0.26
PVT1-218ENST00000523328 FBXL17Q9UF56 701 aa16.68■□□□□ 0.26
PVT1-218ENST00000523328 MPTX1A8MV57 137 aa16.67■□□□□ 0.26
PVT1-218ENST00000523328 ZNF207O43670 478 aaKnown RBP16.67■□□□□ 0.26
PVT1-218ENST00000523328 HPRT1P00492 218 aa16.67■□□□□ 0.26
PVT1-218ENST00000523328 FGF2P09038 288 aa16.67■□□□□ 0.26
PVT1-218ENST00000523328 ADMP35318 185 aa16.67■□□□□ 0.26
PVT1-218ENST00000523328 GNG2P59768 71 aa16.67■□□□□ 0.26
PVT1-218ENST00000523328 WT1-ASQ06250 92 aa16.67■□□□□ 0.26
PVT1-218ENST00000523328 OR13F1Q8NGS4 319 aa16.67■□□□□ 0.26
PVT1-218ENST00000523328 ATP6V0BQ99437 205 aa16.67■□□□□ 0.26
PVT1-218ENST00000523328 C6orf62Q9GZU0 229 aaPredicted RBP16.67■□□□□ 0.26
PVT1-218ENST00000523328 TRDV1A0A1B0GX56 115 aa16.66■□□□□ 0.26
PVT1-218ENST00000523328 SMIM30A4D0T7 59 aa16.66■□□□□ 0.26
PVT1-218ENST00000523328 SULT1C2O00338 296 aa16.66■□□□□ 0.26
PVT1-218ENST00000523328 IFNA4P05014 189 aa16.66■□□□□ 0.26
PVT1-218ENST00000523328 SERPINE2P07093 398 aa16.66■□□□□ 0.26
PVT1-218ENST00000523328 NQO2P16083 231 aa16.66■□□□□ 0.26
PVT1-218ENST00000523328 MFAP2P55001 183 aa16.66■□□□□ 0.26
PVT1-218ENST00000523328 ZNF414Q96IQ9 312 aa16.66■□□□□ 0.26
PVT1-218ENST00000523328 TMEM140Q9NV12 185 aa16.66■□□□□ 0.26
PVT1-218ENST00000523328 NDUFB11Q9NX14 153 aa16.66■□□□□ 0.26
PVT1-218ENST00000523328 CYB5BO43169 146 aa16.65■□□□□ 0.26
PVT1-218ENST00000523328 OR13C7P0DN81 318 aa16.65■□□□□ 0.26
PVT1-218ENST00000523328 PTHLHP12272 177 aa16.65■□□□□ 0.26
PVT1-218ENST00000523328 FCGR2CP31995 323 aa16.65■□□□□ 0.26
PVT1-218ENST00000523328 TBCEQ15813 527 aaPredicted RBP16.65■□□□□ 0.26
PVT1-218ENST00000523328 THOC7Q6I9Y2 204 aaKnown RBP16.65■□□□□ 0.26
PVT1-218ENST00000523328 SLC25A24Q6NUK1 477 aa16.65■□□□□ 0.26
PVT1-218ENST00000523328 ZBTB34Q8NCN2 500 aa16.65■□□□□ 0.26
PVT1-218ENST00000523328 OR11H2Q8NH07 326 aa16.65■□□□□ 0.26
PVT1-218ENST00000523328 C2CD4CQ8TF44 421 aa16.65■□□□□ 0.26
PVT1-218ENST00000523328 SCARB1Q8WTV0 552 aa16.65■□□□□ 0.26
PVT1-218ENST00000523328 RNF2Q99496 336 aa16.65■□□□□ 0.26
PVT1-218ENST00000523328 C21orf62Q9NYP8 219 aa16.65■□□□□ 0.26
PVT1-218ENST00000523328 SMPXQ9UHP9 88 aa16.65■□□□□ 0.26
PVT1-218ENST00000523328 ETV7Q9Y603 341 aa16.65■□□□□ 0.26
PVT1-218ENST00000523328 IGHV3-21A0A0B4J1V1 117 aa16.64■□□□□ 0.25
PVT1-218ENST00000523328 C15orf62A8K5M9 175 aa16.64■□□□□ 0.25
PVT1-218ENST00000523328 AQP4P55087 323 aa16.64■□□□□ 0.25
PVT1-218ENST00000523328 TCTAP57738 103 aa16.64■□□□□ 0.25
PVT1-218ENST00000523328 ZNF367Q7RTV3 350 aa16.64■□□□□ 0.25
PVT1-218ENST00000523328 FAT2Q9NYQ8 4349 aa16.64■□□□□ 0.25
PVT1-218ENST00000523328 TEX50A0A1B0GTY4 177 aa16.63■□□□□ 0.25
PVT1-218ENST00000523328 PPYP01298 95 aa16.63■□□□□ 0.25
PVT1-218ENST00000523328 TRAPPC2P0DI81 140 aa16.63■□□□□ 0.25
PVT1-218ENST00000523328 TRAPPC2BP0DI82 140 aa16.63■□□□□ 0.25
PVT1-218ENST00000523328 CATR1Q13166 79 aa16.63■□□□□ 0.25
PVT1-218ENST00000523328 C22orf42Q6IC83 251 aa16.63■□□□□ 0.25
PVT1-218ENST00000523328 HSD17B13Q7Z5P4 300 aaPredicted RBP16.63■□□□□ 0.25
PVT1-218ENST00000523328 BEST4Q8NFU0 473 aa16.63■□□□□ 0.25
PVT1-218ENST00000523328 DMBX1Q8NFW5 382 aa16.63■□□□□ 0.25
PVT1-218ENST00000523328 PLEKHA2Q9HB19 425 aa16.63■□□□□ 0.25
PVT1-218ENST00000523328 APLNQ9ULZ1 77 aa16.63■□□□□ 0.25
PVT1-218ENST00000523328 F11RQ9Y624 299 aaKnown RBP16.63■□□□□ 0.25
PVT1-218ENST00000523328 K7EIM0 57 aa16.62■□□□□ 0.25
PVT1-218ENST00000523328 CHEK1O14757 476 aa16.62■□□□□ 0.25
PVT1-218ENST00000523328 SCGNO76038 276 aa16.62■□□□□ 0.25
PVT1-218ENST00000523328 GVQW1Q8N7I0 195 aa16.62■□□□□ 0.25
PVT1-218ENST00000523328 RHPN1-AS1Q9BWJ2 59 aa16.62■□□□□ 0.25
PVT1-218ENST00000523328 SLC5A7Q9GZV3 580 aa16.62■□□□□ 0.25
PVT1-218ENST00000523328 DNAH2Q9P225 4427 aa16.61■□□□□ 0.25
PVT1-218ENST00000523328 IGHV7-4-1A0A0J9YVY3 117 aa16.61■□□□□ 0.25
PVT1-218ENST00000523328 NOTOA8MTQ0 251 aa16.61■□□□□ 0.25
PVT1-218ENST00000523328 DEFB4AO15263 64 aa16.61■□□□□ 0.25
PVT1-218ENST00000523328 CTSGP08311 255 aa16.61■□□□□ 0.25
PVT1-218ENST00000523328 TFPI2P48307 235 aa16.61■□□□□ 0.25
PVT1-218ENST00000523328 CMC4P56277 68 aaPredicted RBP16.61■□□□□ 0.25
PVT1-218ENST00000523328 ARPC4P59998 168 aa16.61■□□□□ 0.25
PVT1-218ENST00000523328 ZNF818PQ6ZRF7 136 aa16.61■□□□□ 0.25
PVT1-218ENST00000523328 UBAC2Q8NBM4 344 aa16.61■□□□□ 0.25
PVT1-218ENST00000523328 OR1L8Q8NGR8 309 aa16.61■□□□□ 0.25
PVT1-218ENST00000523328 OR51H1Q8NH63 302 aa16.61■□□□□ 0.25
PVT1-218ENST00000523328 NDUFA4L2Q9NRX3 87 aa16.61■□□□□ 0.25
PVT1-218ENST00000523328 PKHD1P08F94 4074 aa16.61■□□□□ 0.25
PVT1-218ENST00000523328 COMMD9Q9P000 198 aa16.6■□□□□ 0.25
PVT1-218ENST00000523328 FXYD4P59646 89 aa16.59■□□□□ 0.25
PVT1-218ENST00000523328 Q56UQ5 140 aa16.59■□□□□ 0.25
PVT1-218ENST00000523328 FAM90A2PQ658T7 463 aa16.59■□□□□ 0.25
PVT1-218ENST00000523328 HOGA1Q86XE5 327 aa16.59■□□□□ 0.25
PVT1-218ENST00000523328 TMEM116Q8NCL8 245 aa16.59■□□□□ 0.25
PVT1-218ENST00000523328 LGALS14Q8TCE9 139 aa16.59■□□□□ 0.25
PVT1-218ENST00000523328 LSM10Q969L4 123 aaKnown RBP16.59■□□□□ 0.25
PVT1-218ENST00000523328 OR10C1Q96KK4 312 aa16.59■□□□□ 0.25
PVT1-218ENST00000523328 IGKV3-7A0A075B6H7 116 aa16.58■□□□□ 0.24
PVT1-218ENST00000523328 IGHV3-49A0A0A0MS15 119 aa16.58■□□□□ 0.24
PVT1-218ENST00000523328 MARCH11A6NNE9 402 aa16.58■□□□□ 0.24
PVT1-218ENST00000523328 IGLL5B9A064 214 aa16.58■□□□□ 0.24
PVT1-218ENST00000523328 CA1P00915 261 aaPredicted RBP16.58■□□□□ 0.24
PVT1-218ENST00000523328 AADACL3Q5VUY0 350 aa16.58■□□□□ 0.24
PVT1-218ENST00000523328 NRG4Q8WWG1 115 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms