RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 MGAT4AQ9UM21 535 aa4.96□□□□□ -1.62
SDCBP-210ENST00000522843 FBXO7Q9Y3I1 522 aa4.96□□□□□ -1.62
SDCBP-210ENST00000522843 A0A0J9YWU9 116 aa4.95□□□□□ -1.62
SDCBP-210ENST00000522843 DISC1C4P0D8 188 aa4.95□□□□□ -1.62
SDCBP-210ENST00000522843 MCRIP1C9JLW8 97 aa4.95□□□□□ -1.62
SDCBP-210ENST00000522843 HSD17B6O14756 317 aa4.95□□□□□ -1.62
SDCBP-210ENST00000522843 DEGS1O15121 323 aa4.95□□□□□ -1.62
SDCBP-210ENST00000522843 PRAF2O60831 178 aa4.95□□□□□ -1.62
SDCBP-210ENST00000522843 RAB3DO95716 219 aa4.95□□□□□ -1.62
SDCBP-210ENST00000522843 DHFRP00374 187 aa4.95□□□□□ -1.62
SDCBP-210ENST00000522843 IGHV3-11P01762 117 aa4.95□□□□□ -1.62
SDCBP-210ENST00000522843 CSN2P05814 226 aa4.95□□□□□ -1.62
SDCBP-210ENST00000522843 CTXN2P0C2S0 81 aa4.95□□□□□ -1.62
SDCBP-210ENST00000522843 GNG10P50151 68 aa4.95□□□□□ -1.62
SDCBP-210ENST00000522843 SNU13P55769 128 aaKnown RBP4.95□□□□□ -1.62
SDCBP-210ENST00000522843 TAS2R46P59540 309 aa4.95□□□□□ -1.62
SDCBP-210ENST00000522843 NDPQ00604 133 aa4.95□□□□□ -1.62
SDCBP-210ENST00000522843 DHODHQ02127 395 aa4.95□□□□□ -1.62
SDCBP-210ENST00000522843 ZNF816Q0VGE8 651 aaPredicted RBP4.95□□□□□ -1.62
SDCBP-210ENST00000522843 RBMS2Q15434 407 aaKnown RBP4.95□□□□□ -1.62
SDCBP-210ENST00000522843 SURF2Q15527 256 aaPredicted RBP4.95□□□□□ -1.62
SDCBP-210ENST00000522843 ZNF660Q6AZW8 331 aaPredicted RBP4.95□□□□□ -1.62
SDCBP-210ENST00000522843 MOB3BQ86TA1 216 aa4.95□□□□□ -1.62
SDCBP-210ENST00000522843 DEFB125Q8N687 156 aa4.95□□□□□ -1.62
SDCBP-210ENST00000522843 SUMF2Q8NBJ7 301 aa4.95□□□□□ -1.62
SDCBP-210ENST00000522843 BEST4Q8NFU0 473 aa4.95□□□□□ -1.62
SDCBP-210ENST00000522843 OR5AP2Q8NGF4 316 aa4.95□□□□□ -1.62
SDCBP-210ENST00000522843 OR4C16Q8NGL9 310 aa4.95□□□□□ -1.62
SDCBP-210ENST00000522843 OR2T10Q8NGZ9 312 aa4.95□□□□□ -1.62
SDCBP-210ENST00000522843 OR4K15Q8NH41 348 aa4.95□□□□□ -1.62
SDCBP-210ENST00000522843 GIMAP1Q8WWP7 306 aa4.95□□□□□ -1.62
SDCBP-210ENST00000522843 SCGB3A2Q96PL1 93 aa4.95□□□□□ -1.62
SDCBP-210ENST00000522843 RASL11BQ9BPW5 248 aa4.95□□□□□ -1.62
SDCBP-210ENST00000522843 CMSS1Q9BQ75 279 aaKnown RBP4.95□□□□□ -1.62
SDCBP-210ENST00000522843 NEURL2Q9BR09 285 aa4.95□□□□□ -1.62
SDCBP-210ENST00000522843 Q9N2K0 584 aa4.95□□□□□ -1.62
SDCBP-210ENST00000522843 SIGLEC8Q9NYZ4 499 aa4.95□□□□□ -1.62
SDCBP-210ENST00000522843 AK3Q9UIJ7 227 aa4.95□□□□□ -1.62
SDCBP-210ENST00000522843 SCP2D1Q9UJQ7 156 aa4.95□□□□□ -1.62
SDCBP-210ENST00000522843 AMMECR1Q9Y4X0 333 aaPredicted RBP4.95□□□□□ -1.62
SDCBP-210ENST00000522843 DMBT1Q9UGM3 2413 aaPredicted RBP4.95□□□□□ -1.62
SDCBP-210ENST00000522843 IGHV7-81A0A0B4J1V7 117 aa4.94□□□□□ -1.62
SDCBP-210ENST00000522843 TRAV41A0A0B4J266 112 aa4.94□□□□□ -1.62
SDCBP-210ENST00000522843 KBTBD11-OT1A0A1B0GTJ5 212 aa4.94□□□□□ -1.62
SDCBP-210ENST00000522843 LINC00854A0A1B0GVQ3 168 aa4.94□□□□□ -1.62
SDCBP-210ENST00000522843 ZNF729A6NN14 1252 aaPredicted RBP4.94□□□□□ -1.62
SDCBP-210ENST00000522843 SNRPGP15A8MWD9 76 aa4.94□□□□□ -1.62
SDCBP-210ENST00000522843 NPIPB11E5RHQ5 1161 aa4.94□□□□□ -1.62
SDCBP-210ENST00000522843 SLC33A1O00400 549 aaPredicted RBP4.94□□□□□ -1.62
SDCBP-210ENST00000522843 OR7C1O76099 320 aaPredicted RBP4.94□□□□□ -1.62
SDCBP-210ENST00000522843 OR2H2O95918 312 aa4.94□□□□□ -1.62
SDCBP-210ENST00000522843 MT-ND4P03905 459 aa4.94□□□□□ -1.62
SDCBP-210ENST00000522843 HSPB1P04792 205 aaKnown RBP4.94□□□□□ -1.62
SDCBP-210ENST00000522843 FCER2P06734 321 aa4.94□□□□□ -1.62
SDCBP-210ENST00000522843 FCGR3AP08637 254 aa4.94□□□□□ -1.62
SDCBP-210ENST00000522843 CD7P09564 240 aa4.94□□□□□ -1.62
SDCBP-210ENST00000522843 OR5H8P0DN80 308 aa4.94□□□□□ -1.62
SDCBP-210ENST00000522843 PRKACAP17612 351 aa4.94□□□□□ -1.62
SDCBP-210ENST00000522843 UBE2MP61081 183 aaKnown RBP4.94□□□□□ -1.62
SDCBP-210ENST00000522843 ARFRP1Q13795 201 aa4.94□□□□□ -1.62
SDCBP-210ENST00000522843 LTC4SQ16873 150 aa4.94□□□□□ -1.62
SDCBP-210ENST00000522843 RNASE10Q5GAN6 216 aaKnown RBP4.94□□□□□ -1.62
SDCBP-210ENST00000522843 ZNF497Q6ZNH5 498 aa4.94□□□□□ -1.62
SDCBP-210ENST00000522843 GVQW1Q8N7I0 195 aa4.94□□□□□ -1.62
SDCBP-210ENST00000522843 OR4D10Q8NGI6 311 aa4.94□□□□□ -1.62
SDCBP-210ENST00000522843 OR51S1Q8NGJ8 323 aa4.94□□□□□ -1.62
SDCBP-210ENST00000522843 OR13A1Q8NGR1 328 aa4.94□□□□□ -1.62
SDCBP-210ENST00000522843 OR13C8Q8NGS7 320 aa4.94□□□□□ -1.62
SDCBP-210ENST00000522843 NUDCD2Q8WVJ2 157 aa4.94□□□□□ -1.62
SDCBP-210ENST00000522843 LINC00574Q9H8X3 128 aa4.94□□□□□ -1.62
SDCBP-210ENST00000522843 C12orf4Q9NQ89 552 aa4.94□□□□□ -1.62
SDCBP-210ENST00000522843 CALYQ9NYX4 217 aa4.94□□□□□ -1.62
SDCBP-210ENST00000522843 ZNF581Q9P0T4 197 aa4.94□□□□□ -1.62
SDCBP-210ENST00000522843 ANXA10Q9UJ72 324 aa4.94□□□□□ -1.62
SDCBP-210ENST00000522843 ZNF221Q9UK13 617 aa4.94□□□□□ -1.62
SDCBP-210ENST00000522843 GPR132Q9UNW8 380 aa4.94□□□□□ -1.62
SDCBP-210ENST00000522843 HMCN2Q8NDA2 5059 aa4.94□□□□□ -1.62
SDCBP-210ENST00000522843 IGKV1D-8A0A087WSZ0 117 aa4.93□□□□□ -1.62
SDCBP-210ENST00000522843 A0A0B4J293 547 aa4.93□□□□□ -1.62
SDCBP-210ENST00000522843 TRDCB7Z8K6 153 aa4.93□□□□□ -1.62
SDCBP-210ENST00000522843 H0Y980 276 aa4.93□□□□□ -1.62
SDCBP-210ENST00000522843 RTL8CO15255 209 aa4.93□□□□□ -1.62
SDCBP-210ENST00000522843 MOSP00540 346 aa4.93□□□□□ -1.62
SDCBP-210ENST00000522843 CSN3P07498 182 aa4.93□□□□□ -1.62
SDCBP-210ENST00000522843 HLA-GP17693 338 aa4.93□□□□□ -1.62
SDCBP-210ENST00000522843 GZMHP20718 246 aa4.93□□□□□ -1.62
SDCBP-210ENST00000522843 CD1BP29016 333 aa4.93□□□□□ -1.62
SDCBP-210ENST00000522843 HRH1P35367 487 aa4.93□□□□□ -1.62
SDCBP-210ENST00000522843 CCR6P51684 374 aa4.93□□□□□ -1.62
SDCBP-210ENST00000522843 ATXN7L3Q14CW9 347 aaPredicted RBP4.93□□□□□ -1.62
SDCBP-210ENST00000522843 TATDN3Q17R31 274 aa4.93□□□□□ -1.62
SDCBP-210ENST00000522843 KRBOX4Q5JUW0 171 aa4.93□□□□□ -1.62
SDCBP-210ENST00000522843 LY6G6FQ5SQ64 297 aa4.93□□□□□ -1.62
SDCBP-210ENST00000522843 ATAD3CQ5T2N8 411 aa4.93□□□□□ -1.62
SDCBP-210ENST00000522843 C10orf25Q5T742 122 aa4.93□□□□□ -1.62
SDCBP-210ENST00000522843 AADACL3Q5VUY0 350 aa4.93□□□□□ -1.62
SDCBP-210ENST00000522843 GLDNQ6ZMI3 551 aaPredicted RBP4.93□□□□□ -1.62
SDCBP-210ENST00000522843 IDO2Q6ZQW0 420 aa4.93□□□□□ -1.62
SDCBP-210ENST00000522843 LINC00336Q6ZUF6 198 aa4.93□□□□□ -1.62
SDCBP-210ENST00000522843 MOB1BQ7L9L4 216 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms