RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 SSBP3Q9BWW4 388 aaPredicted RBP11.63□□□□□ -0.55
SYNPO-205ENST00000522122 REG1AP05451 166 aa11.63□□□□□ -0.55
SYNPO-205ENST00000522122 TMEM78Q5T7P6 136 aa11.63□□□□□ -0.55
SYNPO-205ENST00000522122 A0A1B0GV90 55 aa11.63□□□□□ -0.55
SYNPO-205ENST00000522122 CIDEAO60543 219 aa11.63□□□□□ -0.55
SYNPO-205ENST00000522122 ZNF883P0CG24 379 aa11.63□□□□□ -0.55
SYNPO-205ENST00000522122 C12orf54Q6X4T0 127 aa11.63□□□□□ -0.55
SYNPO-205ENST00000522122 RABAC1Q9UI14 185 aa11.63□□□□□ -0.55
SYNPO-205ENST00000522122 MFAP4P55083 255 aa11.62□□□□□ -0.55
SYNPO-205ENST00000522122 PLPPR1Q8TBJ4 325 aa11.62□□□□□ -0.55
SYNPO-205ENST00000522122 SRSF12Q8WXF0 261 aaKnown RBP11.62□□□□□ -0.55
SYNPO-205ENST00000522122 ATG101Q9BSB4 218 aa11.62□□□□□ -0.55
SYNPO-205ENST00000522122 HIST1H2BKO60814 126 aa11.62□□□□□ -0.55
SYNPO-205ENST00000522122 HIST1H2BJP06899 126 aa11.62□□□□□ -0.55
SYNPO-205ENST00000522122 CEACAM1P13688 526 aa11.62□□□□□ -0.55
SYNPO-205ENST00000522122 HIST1H2BOP23527 126 aa11.62□□□□□ -0.55
SYNPO-205ENST00000522122 HIST1H2BBP33778 126 aa11.62□□□□□ -0.55
SYNPO-205ENST00000522122 HIST1H2BDP58876 126 aa11.62□□□□□ -0.55
SYNPO-205ENST00000522122 HIST1H2BCP62807 126 aa11.62□□□□□ -0.55
SYNPO-205ENST00000522122 HIST2H2BEQ16778 126 aa11.62□□□□□ -0.55
SYNPO-205ENST00000522122 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.62□□□□□ -0.55
SYNPO-205ENST00000522122 OSR1Q8TAX0 266 aaPredicted RBP11.62□□□□□ -0.55
SYNPO-205ENST00000522122 HIST1H2BHQ93079 126 aa11.62□□□□□ -0.55
SYNPO-205ENST00000522122 HIST1H2BNQ99877 126 aa11.62□□□□□ -0.55
SYNPO-205ENST00000522122 HIST1H2BMQ99879 126 aa11.62□□□□□ -0.55
SYNPO-205ENST00000522122 KLF2Q9Y5W3 355 aaPredicted RBP11.62□□□□□ -0.55
SYNPO-205ENST00000522122 PPIAL4CA0A0B4J2A2 164 aa11.62□□□□□ -0.55
SYNPO-205ENST00000522122 PPIAL4GP0DN37 164 aa11.62□□□□□ -0.55
SYNPO-205ENST00000522122 DCTN5Q9BTE1 182 aa11.62□□□□□ -0.55
SYNPO-205ENST00000522122 LRRK1Q38SD2 2015 aa11.62□□□□□ -0.55
SYNPO-205ENST00000522122 MPDZO75970 2070 aa11.62□□□□□ -0.55
SYNPO-205ENST00000522122 IGKV1-27A0A075B6S5 117 aa11.62□□□□□ -0.55
SYNPO-205ENST00000522122 WIPF3A6NGB9 483 aa11.62□□□□□ -0.55
SYNPO-205ENST00000522122 H3BTX0 84 aa11.62□□□□□ -0.55
SYNPO-205ENST00000522122 SOD3P08294 240 aa11.62□□□□□ -0.55
SYNPO-205ENST00000522122 RBPMS2Q6ZRY4 209 aaKnown RBP11.62□□□□□ -0.55
SYNPO-205ENST00000522122 C1orf162Q8NEQ5 155 aaPredicted RBP11.62□□□□□ -0.55
SYNPO-205ENST00000522122 C1orf147Q96MC9 270 aaPredicted RBP11.62□□□□□ -0.55
SYNPO-205ENST00000522122 K7ERU9 68 aa11.61□□□□□ -0.55
SYNPO-205ENST00000522122 CGAP01215 116 aa11.61□□□□□ -0.55
SYNPO-205ENST00000522122 GPX4P36969 197 aaPredicted RBP11.61□□□□□ -0.55
SYNPO-205ENST00000522122 FOXL2NBQ6ZUU3 175 aa11.61□□□□□ -0.55
SYNPO-205ENST00000522122 PRDM6Q9NQX0 595 aa11.61□□□□□ -0.55
SYNPO-205ENST00000522122 TRAV30A0A087WSZ9 112 aa11.61□□□□□ -0.55
SYNPO-205ENST00000522122 FAM106CPP0CH98 169 aa11.61□□□□□ -0.55
SYNPO-205ENST00000522122 LHX2P50458 406 aa11.61□□□□□ -0.55
SYNPO-205ENST00000522122 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.61□□□□□ -0.55
SYNPO-205ENST00000522122 IFI27L2Q9H2X8 130 aa11.61□□□□□ -0.55
SYNPO-205ENST00000522122 TMEM242Q9NWH2 141 aa11.61□□□□□ -0.55
SYNPO-205ENST00000522122 IGKV1-12A0A0C4DH73 117 aa11.61□□□□□ -0.55
SYNPO-205ENST00000522122 C5orf63A6NC05 138 aa11.61□□□□□ -0.55
SYNPO-205ENST00000522122 IQCF6A8MYZ5 107 aa11.61□□□□□ -0.55
SYNPO-205ENST00000522122 IGKV1D-12P01611 117 aa11.61□□□□□ -0.55
SYNPO-205ENST00000522122 ATP5G3P48201 142 aa11.61□□□□□ -0.55
SYNPO-205ENST00000522122 TAS2R60P59551 318 aa11.61□□□□□ -0.55
SYNPO-205ENST00000522122 OR4A47Q6IF82 309 aa11.61□□□□□ -0.55
SYNPO-205ENST00000522122 WDYHV1Q96HA8 205 aa11.61□□□□□ -0.55
SYNPO-205ENST00000522122 SIAH2O43255 324 aa11.61□□□□□ -0.55
SYNPO-205ENST00000522122 SNCGO76070 127 aa11.61□□□□□ -0.55
SYNPO-205ENST00000522122 IGFBP2P18065 325 aa11.61□□□□□ -0.55
SYNPO-205ENST00000522122 ZNF600Q6ZNG1 722 aa11.61□□□□□ -0.55
SYNPO-205ENST00000522122 IL36BQ9NZH7 164 aa11.61□□□□□ -0.55
SYNPO-205ENST00000522122 C9JQL5 133 aa11.6□□□□□ -0.55
SYNPO-205ENST00000522122 MUC15Q8N387 334 aa11.6□□□□□ -0.55
SYNPO-205ENST00000522122 TMEM171Q8WVE6 324 aa11.6□□□□□ -0.55
SYNPO-205ENST00000522122 CLEC7AQ9BXN2 247 aa11.6□□□□□ -0.55
SYNPO-205ENST00000522122 DCAF16Q9NXF7 216 aa11.6□□□□□ -0.55
SYNPO-205ENST00000522122 SEMA5BQ9P283 1151 aa11.6□□□□□ -0.55
SYNPO-205ENST00000522122 TRAV1-1A0A0B4J248 108 aa11.6□□□□□ -0.55
SYNPO-205ENST00000522122 ETV2O00321 342 aaPredicted RBP11.6□□□□□ -0.55
SYNPO-205ENST00000522122 SLC17A3O00476 420 aa11.6□□□□□ -0.55
SYNPO-205ENST00000522122 IGHV1-2P23083 117 aa11.6□□□□□ -0.55
SYNPO-205ENST00000522122 PSMB2P49721 201 aa11.6□□□□□ -0.55
SYNPO-205ENST00000522122 TCTAP57738 103 aa11.6□□□□□ -0.55
SYNPO-205ENST00000522122 ARF6P62330 175 aa11.6□□□□□ -0.55
SYNPO-205ENST00000522122 SLC25A34Q6PIV7 304 aa11.6□□□□□ -0.55
SYNPO-205ENST00000522122 ZIC4Q8N9L1 334 aa11.6□□□□□ -0.55
SYNPO-205ENST00000522122 UCNP55089 124 aa11.6□□□□□ -0.55
SYNPO-205ENST00000522122 RPL23P62829 140 aaKnown RBP11.6□□□□□ -0.55
SYNPO-205ENST00000522122 ZNF841Q6ZN19 808 aa11.6□□□□□ -0.55
SYNPO-205ENST00000522122 SCO2A0A1W2PP80 73 aa11.6□□□□□ -0.55
SYNPO-205ENST00000522122 CXCL1P09341 107 aa11.6□□□□□ -0.55
SYNPO-205ENST00000522122 FAM201AQ5SY85 155 aa11.6□□□□□ -0.55
SYNPO-205ENST00000522122 LINC00305Q7Z4B0 112 aa11.6□□□□□ -0.55
SYNPO-205ENST00000522122 GUCD1Q96NT3 240 aa11.6□□□□□ -0.55
SYNPO-205ENST00000522122 NEU1Q99519 415 aa11.6□□□□□ -0.55
SYNPO-205ENST00000522122 GPR179Q6PRD1 2367 aa11.59□□□□□ -0.55
SYNPO-205ENST00000522122 IGHV2OR16-5A0A0B4J2B6 119 aa11.59□□□□□ -0.55
SYNPO-205ENST00000522122 WISP1O95388 367 aa11.59□□□□□ -0.55
SYNPO-205ENST00000522122 CELA3BP08861 270 aa11.59□□□□□ -0.55
SYNPO-205ENST00000522122 HTN1P15515 57 aa11.59□□□□□ -0.55
SYNPO-205ENST00000522122 TNFSF10P50591 281 aa11.59□□□□□ -0.55
SYNPO-205ENST00000522122 LOXL3P58215 753 aa11.59□□□□□ -0.55
SYNPO-205ENST00000522122 PEAR1Q5VY43 1037 aaPredicted RBP11.59□□□□□ -0.55
SYNPO-205ENST00000522122 GOLT1AQ6ZVE7 132 aa11.59□□□□□ -0.55
SYNPO-205ENST00000522122 AP5S1Q9NUS5 200 aa11.59□□□□□ -0.55
SYNPO-205ENST00000522122 TRAV24A0A0B4J272 114 aa11.59□□□□□ -0.55
SYNPO-205ENST00000522122 KBTBD11-OT1A0A1B0GTJ5 212 aa11.59□□□□□ -0.55
SYNPO-205ENST00000522122 MOSP00540 346 aa11.59□□□□□ -0.55
SYNPO-205ENST00000522122 DLX1P56177 255 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms