RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 JTBO76095 146 aa14.69□□□□□ -0.06
PABPC1-215ENST00000520804 RPA2P15927 270 aa14.69□□□□□ -0.06
PABPC1-215ENST00000520804 ZNF585BQ52M93 769 aa14.69□□□□□ -0.06
PABPC1-215ENST00000520804 DHRS11Q6UWP2 260 aa14.69□□□□□ -0.06
PABPC1-215ENST00000520804 GDPD1Q8N9F7 314 aa14.69□□□□□ -0.06
PABPC1-215ENST00000520804 VN1R17PQ8TDU5 208 aa14.69□□□□□ -0.06
PABPC1-215ENST00000520804 S100A16Q96FQ6 103 aaKnown RBP14.69□□□□□ -0.06
PABPC1-215ENST00000520804 GGTLC1Q9BX51 225 aa14.69□□□□□ -0.06
PABPC1-215ENST00000520804 ZNF436Q9C0F3 470 aaPredicted RBP14.69□□□□□ -0.06
PABPC1-215ENST00000520804 ANAPC10Q9UM13 185 aa14.69□□□□□ -0.06
PABPC1-215ENST00000520804 UFC1Q9Y3C8 167 aa14.69□□□□□ -0.06
PABPC1-215ENST00000520804 BIRC6Q9NR09 4857 aa14.69□□□□□ -0.06
PABPC1-215ENST00000520804 LOC102724200A0A096LPH7 203 aaPredicted RBP14.68□□□□□ -0.06
PABPC1-215ENST00000520804 IGHV3-35A0A0C4DH35 117 aa14.68□□□□□ -0.06
PABPC1-215ENST00000520804 TEX50A0A1B0GTY4 177 aa14.68□□□□□ -0.06
PABPC1-215ENST00000520804 CYB5BO43169 146 aa14.68□□□□□ -0.06
PABPC1-215ENST00000520804 TRAPPC2P0DI81 140 aa14.68□□□□□ -0.06
PABPC1-215ENST00000520804 TRAPPC2BP0DI82 140 aa14.68□□□□□ -0.06
PABPC1-215ENST00000520804 ERVK-16P61578 105 aa14.68□□□□□ -0.06
PABPC1-215ENST00000520804 WT1-ASQ06250 92 aa14.68□□□□□ -0.06
PABPC1-215ENST00000520804 KCTD21Q4G0X4 260 aa14.68□□□□□ -0.06
PABPC1-215ENST00000520804 RBPMS2Q6ZRY4 209 aaKnown RBP14.68□□□□□ -0.06
PABPC1-215ENST00000520804 HSD17B13Q7Z5P4 300 aaPredicted RBP14.68□□□□□ -0.06
PABPC1-215ENST00000520804 CROCCP3Q8IVE0 287 aa14.68□□□□□ -0.06
PABPC1-215ENST00000520804 MOB3AQ96BX8 217 aa14.68□□□□□ -0.06
PABPC1-215ENST00000520804 ZNF2Q9BSG1 426 aaPredicted RBP14.68□□□□□ -0.06
PABPC1-215ENST00000520804 MARCH11A6NNE9 402 aa14.67□□□□□ -0.06
PABPC1-215ENST00000520804 TGOLN2O43493 480 aa14.67□□□□□ -0.06
PABPC1-215ENST00000520804 PGLYRP1O75594 196 aaPredicted RBP14.67□□□□□ -0.06
PABPC1-215ENST00000520804 RLN1P04808 185 aa14.67□□□□□ -0.06
PABPC1-215ENST00000520804 SERPINE2P07093 398 aa14.67□□□□□ -0.06
PABPC1-215ENST00000520804 OR13C7P0DN81 318 aa14.67□□□□□ -0.06
PABPC1-215ENST00000520804 F2RP25116 425 aa14.67□□□□□ -0.06
PABPC1-215ENST00000520804 TGFBR1P36897 503 aa14.67□□□□□ -0.06
PABPC1-215ENST00000520804 RFX2P48378 723 aa14.67□□□□□ -0.06
PABPC1-215ENST00000520804 UBE2NLQ5JXB2 153 aa14.67□□□□□ -0.06
PABPC1-215ENST00000520804 OR1L6Q8NGR2 347 aa14.67□□□□□ -0.06
PABPC1-215ENST00000520804 OR1L8Q8NGR8 309 aa14.67□□□□□ -0.06
PABPC1-215ENST00000520804 TMEM190Q8WZ59 177 aa14.67□□□□□ -0.06
PABPC1-215ENST00000520804 PMP2P02689 132 aa14.66□□□□□ -0.06
PABPC1-215ENST00000520804 TAS2R20P59543 309 aa14.66□□□□□ -0.06
PABPC1-215ENST00000520804 SLC25A24Q6NUK1 477 aa14.66□□□□□ -0.06
PABPC1-215ENST00000520804 CADM3Q8N126 398 aa14.66□□□□□ -0.06
PABPC1-215ENST00000520804 OVOL2Q9BRP0 275 aa14.66□□□□□ -0.06
PABPC1-215ENST00000520804 C5orf66Q9H5L9 145 aa14.66□□□□□ -0.06
PABPC1-215ENST00000520804 NDUFA4L2Q9NRX3 87 aa14.66□□□□□ -0.06
PABPC1-215ENST00000520804 OR2T8A6NH00 312 aa14.65□□□□□ -0.06
PABPC1-215ENST00000520804 NAT1P18440 290 aa14.65□□□□□ -0.06
PABPC1-215ENST00000520804 RPS19P39019 145 aaKnown RBP14.65□□□□□ -0.06
PABPC1-215ENST00000520804 TMEM69Q5SWH9 247 aa14.65□□□□□ -0.06
PABPC1-215ENST00000520804 OR2C3Q8N628 320 aa14.65□□□□□ -0.06
PABPC1-215ENST00000520804 OR5H2Q8NGV7 314 aa14.65□□□□□ -0.06
PABPC1-215ENST00000520804 FCAMRQ8WWV6 532 aa14.65□□□□□ -0.06
PABPC1-215ENST00000520804 LSM10Q969L4 123 aaKnown RBP14.65□□□□□ -0.06
PABPC1-215ENST00000520804 DGCR14Q96DF8 476 aaKnown RBP14.65□□□□□ -0.06
PABPC1-215ENST00000520804 BSCL2Q96G97 398 aaPredicted RBP14.65□□□□□ -0.06
PABPC1-215ENST00000520804 F11RQ9Y624 299 aaKnown RBP14.65□□□□□ -0.06
PABPC1-215ENST00000520804 KRASP01116 189 aa14.64□□□□□ -0.07
PABPC1-215ENST00000520804 LPAR6P43657 344 aa14.64□□□□□ -0.07
PABPC1-215ENST00000520804 MFAP2P55001 183 aa14.64□□□□□ -0.07
PABPC1-215ENST00000520804 TAS2R46P59540 309 aa14.64□□□□□ -0.07
PABPC1-215ENST00000520804 CMTM1Q8IZ96 169 aa14.64□□□□□ -0.07
PABPC1-215ENST00000520804 SAMD12Q8N8I0 201 aa14.64□□□□□ -0.07
PABPC1-215ENST00000520804 ATP6V0BQ99437 205 aa14.64□□□□□ -0.07
PABPC1-215ENST00000520804 SPAG8Q99932 426 aaPredicted RBP14.64□□□□□ -0.07
PABPC1-215ENST00000520804 HINT2Q9BX68 163 aa14.64□□□□□ -0.07
PABPC1-215ENST00000520804 FXYD6Q9H0Q3 95 aa14.64□□□□□ -0.07
PABPC1-215ENST00000520804 NSG2Q9Y328 171 aa14.64□□□□□ -0.07
PABPC1-215ENST00000520804 OR51B2Q9Y5P1 312 aa14.64□□□□□ -0.07
PABPC1-215ENST00000520804 ALMS1Q8TCU4 4167 aa14.63□□□□□ -0.07
PABPC1-215ENST00000520804 GPR31O00270 319 aa14.63□□□□□ -0.07
PABPC1-215ENST00000520804 TSPAN4O14817 238 aa14.63□□□□□ -0.07
PABPC1-215ENST00000520804 SNAPC5O75971 98 aa14.63□□□□□ -0.07
PABPC1-215ENST00000520804 G6PCP35575 357 aa14.63□□□□□ -0.07
PABPC1-215ENST00000520804 SPSB3Q6PJ21 355 aa14.63□□□□□ -0.07
PABPC1-215ENST00000520804 SLC38A6Q8IZM9 456 aa14.63□□□□□ -0.07
PABPC1-215ENST00000520804 OR6F1Q8NGZ6 308 aa14.63□□□□□ -0.07
PABPC1-215ENST00000520804 SCARB1Q8WTV0 552 aa14.63□□□□□ -0.07
PABPC1-215ENST00000520804 DAZ1Q9NQZ3 744 aaKnown RBP14.63□□□□□ -0.07
PABPC1-215ENST00000520804 C21orf62Q9NYP8 219 aa14.63□□□□□ -0.07
PABPC1-215ENST00000520804 IGHV3-21A0A0B4J1V1 117 aa14.62□□□□□ -0.07
PABPC1-215ENST00000520804 F8W735 103 aaPredicted RBP14.62□□□□□ -0.07
PABPC1-215ENST00000520804 NDUFA4O00483 81 aa14.62□□□□□ -0.07
PABPC1-215ENST00000520804 PRSS3P35030 304 aa14.62□□□□□ -0.07
PABPC1-215ENST00000520804 TSPAN14Q8NG11 270 aa14.62□□□□□ -0.07
PABPC1-215ENST00000520804 YIPF6Q96EC8 236 aa14.62□□□□□ -0.07
PABPC1-215ENST00000520804 CHRDL1Q9BU40 450 aa14.62□□□□□ -0.07
PABPC1-215ENST00000520804 K7EIM0 57 aa14.61□□□□□ -0.07
PABPC1-215ENST00000520804 LSM3P62310 102 aaKnown RBP14.61□□□□□ -0.07
PABPC1-215ENST00000520804 LAMTOR1Q6IAA8 161 aa14.61□□□□□ -0.07
PABPC1-215ENST00000520804 LYSMD2Q8IV50 215 aa14.61□□□□□ -0.07
PABPC1-215ENST00000520804 UBQLN2Q9UHD9 624 aa14.61□□□□□ -0.07
PABPC1-215ENST00000520804 PRNDQ9UKY0 176 aa14.61□□□□□ -0.07
PABPC1-215ENST00000520804 K7EMT4 169 aa14.6□□□□□ -0.07
PABPC1-215ENST00000520804 ADMP35318 185 aa14.6□□□□□ -0.07
PABPC1-215ENST00000520804 HRH1P35367 487 aa14.6□□□□□ -0.07
PABPC1-215ENST00000520804 APOC4P55056 127 aa14.6□□□□□ -0.07
PABPC1-215ENST00000520804 OR5B3Q8NH48 314 aa14.6□□□□□ -0.07
PABPC1-215ENST00000520804 TMEM56Q96MV1 263 aa14.6□□□□□ -0.07
PABPC1-215ENST00000520804 C20orf24Q9BUV8 137 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms