RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 HOPXQ9BPY8 73 aaPredicted RBP2.17□□□□□ -2.06
SQLE-204ENST00000520493 AICDAQ9GZX7 198 aa2.17□□□□□ -2.06
SQLE-204ENST00000520493 RNASE7Q9H1E1 156 aaKnown RBP2.17□□□□□ -2.06
SQLE-204ENST00000520493 TRABDQ9H4I3 376 aa2.17□□□□□ -2.06
SQLE-204ENST00000520493 C16orf95Q9H693 158 aa2.17□□□□□ -2.06
SQLE-204ENST00000520493 UQCC1Q9NVA1 299 aa2.17□□□□□ -2.06
SQLE-204ENST00000520493 PYCARDQ9ULZ3 195 aa2.17□□□□□ -2.06
SQLE-204ENST00000520493 COL1A2P08123 1366 aa2.17□□□□□ -2.06
SQLE-204ENST00000520493 NEO1Q92859 1461 aa2.17□□□□□ -2.06
SQLE-204ENST00000520493 REREQ9P2R6 1566 aa2.17□□□□□ -2.06
SQLE-204ENST00000520493 SIPA1L1O43166 1804 aa2.17□□□□□ -2.06
SQLE-204ENST00000520493 SETD2Q9BYW2 2564 aaPredicted RBP2.16□□□□□ -2.06
SQLE-204ENST00000520493 CACNA1SQ13698 1873 aa2.16□□□□□ -2.06
SQLE-204ENST00000520493 IGHV3-15A0A0B4J1V0 119 aa2.16□□□□□ -2.06
SQLE-204ENST00000520493 CIAO1O76071 339 aa2.16□□□□□ -2.06
SQLE-204ENST00000520493 ZNF682O95780 498 aa2.16□□□□□ -2.06
SQLE-204ENST00000520493 C1QAP02745 245 aa2.16□□□□□ -2.06
SQLE-204ENST00000520493 C8GP07360 202 aa2.16□□□□□ -2.06
SQLE-204ENST00000520493 SMIM10L2AP0DMW4 78 aa2.16□□□□□ -2.06
SQLE-204ENST00000520493 SMIM10L2BP0DMW5 78 aa2.16□□□□□ -2.06
SQLE-204ENST00000520493 HRES1P13985 223 aa2.16□□□□□ -2.06
SQLE-204ENST00000520493 ZNF22P17026 224 aaPredicted RBP2.16□□□□□ -2.06
SQLE-204ENST00000520493 RPL30P62888 115 aaKnown RBP2.16□□□□□ -2.06
SQLE-204ENST00000520493 CCL20P78556 96 aa2.16□□□□□ -2.06
SQLE-204ENST00000520493 AKR1C1Q04828 323 aa2.16□□□□□ -2.06
SQLE-204ENST00000520493 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.16□□□□□ -2.06
SQLE-204ENST00000520493 IBA57Q5T440 356 aaKnown RBP2.16□□□□□ -2.06
SQLE-204ENST00000520493 GOLT1AQ6ZVE7 132 aa2.16□□□□□ -2.06
SQLE-204ENST00000520493 C12orf45Q8N5I9 185 aaPredicted RBP2.16□□□□□ -2.06
SQLE-204ENST00000520493 OR13C4Q8NGS5 318 aa2.16□□□□□ -2.06
SQLE-204ENST00000520493 ACOT12Q8WYK0 555 aa2.16□□□□□ -2.06
SQLE-204ENST00000520493 EFCAB1Q9HAE3 211 aa2.16□□□□□ -2.06
SQLE-204ENST00000520493 CISHQ9NSE2 258 aa2.16□□□□□ -2.06
SQLE-204ENST00000520493 PAQR5Q9NXK6 330 aaPredicted RBP2.16□□□□□ -2.06
SQLE-204ENST00000520493 SMPXQ9UHP9 88 aa2.16□□□□□ -2.06
SQLE-204ENST00000520493 DOCK3Q8IZD9 2030 aa2.16□□□□□ -2.06
SQLE-204ENST00000520493 SPTBN4Q9H254 2564 aa2.16□□□□□ -2.06
SQLE-204ENST00000520493 PBRM1Q86U86 1689 aa2.15□□□□□ -2.06
SQLE-204ENST00000520493 DOCK6Q96HP0 2047 aa2.15□□□□□ -2.06
SQLE-204ENST00000520493 SEC16AO15027 2179 aa2.15□□□□□ -2.07
SQLE-204ENST00000520493 TMEM235A6NFC5 223 aa2.15□□□□□ -2.07
SQLE-204ENST00000520493 H3BPC8 53 aa2.15□□□□□ -2.07
SQLE-204ENST00000520493 I3L521 148 aa2.15□□□□□ -2.07
SQLE-204ENST00000520493 CDS2O95674 445 aa2.15□□□□□ -2.07
SQLE-204ENST00000520493 SOD1P00441 154 aa2.15□□□□□ -2.07
SQLE-204ENST00000520493 SULT1A3P0DMM9 295 aa2.15□□□□□ -2.07
SQLE-204ENST00000520493 SULT1A4P0DMN0 295 aa2.15□□□□□ -2.07
SQLE-204ENST00000520493 GZMBP10144 247 aa2.15□□□□□ -2.07
SQLE-204ENST00000520493 IFI30P13284 250 aa2.15□□□□□ -2.07
SQLE-204ENST00000520493 CPMP14384 443 aa2.15□□□□□ -2.07
SQLE-204ENST00000520493 PPIBP23284 216 aaKnown RBP2.15□□□□□ -2.07
SQLE-204ENST00000520493 CSN1S1P47710 185 aa2.15□□□□□ -2.07
SQLE-204ENST00000520493 XCL1P47992 114 aa2.15□□□□□ -2.07
SQLE-204ENST00000520493 RWDD2BP57060 319 aa2.15□□□□□ -2.07
SQLE-204ENST00000520493 AP1S1P61966 158 aa2.15□□□□□ -2.07
SQLE-204ENST00000520493 HBA1P69905 142 aa2.15□□□□□ -2.07
SQLE-204ENST00000520493 ARHGAP11BQ3KRB8 267 aa2.15□□□□□ -2.07
SQLE-204ENST00000520493 FAM229BQ4G0N7 80 aa2.15□□□□□ -2.07
SQLE-204ENST00000520493 CMTM2Q8TAZ6 248 aa2.15□□□□□ -2.07
SQLE-204ENST00000520493 SLC7A6Q92536 515 aa2.15□□□□□ -2.07
SQLE-204ENST00000520493 TOMM6Q96B49 74 aa2.15□□□□□ -2.07
SQLE-204ENST00000520493 GPR146Q96CH1 333 aa2.15□□□□□ -2.07
SQLE-204ENST00000520493 CAPZA3Q96KX2 299 aa2.15□□□□□ -2.07
SQLE-204ENST00000520493 CCDC90BQ9GZT6 254 aa2.15□□□□□ -2.07
SQLE-204ENST00000520493 TXNL4BQ9NX01 149 aaKnown RBP2.15□□□□□ -2.07
SQLE-204ENST00000520493 MCTS1Q9ULC4 181 aaKnown RBP2.15□□□□□ -2.07
SQLE-204ENST00000520493 SYNMO15061 1565 aa2.15□□□□□ -2.07
SQLE-204ENST00000520493 BICRAQ9NZM4 1560 aa2.15□□□□□ -2.07
SQLE-204ENST00000520493 NYNRINQ9P2P1 1898 aaKnown RBP2.14□□□□□ -2.07
SQLE-204ENST00000520493 JMJD1CQ15652 2540 aa2.14□□□□□ -2.07
SQLE-204ENST00000520493 TRAV9-1A0A075B6T8 112 aa2.14□□□□□ -2.07
SQLE-204ENST00000520493 hCG_1818297A0A087WSY0 165 aa2.14□□□□□ -2.07
SQLE-204ENST00000520493 DPRXA6NFQ7 191 aa2.14□□□□□ -2.07
SQLE-204ENST00000520493 A8MT66 165 aa2.14□□□□□ -2.07
SQLE-204ENST00000520493 IFNA10P01566 189 aa2.14□□□□□ -2.07
SQLE-204ENST00000520493 C1QBP02746 253 aa2.14□□□□□ -2.07
SQLE-204ENST00000520493 S100A7P31151 101 aa2.14□□□□□ -2.07
SQLE-204ENST00000520493 CD200P41217 278 aa2.14□□□□□ -2.07
SQLE-204ENST00000520493 CRYBA4P53673 196 aa2.14□□□□□ -2.07
SQLE-204ENST00000520493 HIST1H4AP62805 103 aaKnown RBP2.14□□□□□ -2.07
SQLE-204ENST00000520493 GNG3P63215 75 aa2.14□□□□□ -2.07
SQLE-204ENST00000520493 MIAQ16674 131 aa2.14□□□□□ -2.07
SQLE-204ENST00000520493 RPL22L1Q6P5R6 122 aaKnown RBP2.14□□□□□ -2.07
SQLE-204ENST00000520493 C2orf91Q6ZV80 131 aa2.14□□□□□ -2.07
SQLE-204ENST00000520493 SMIM15Q7Z3B0 74 aa2.14□□□□□ -2.07
SQLE-204ENST00000520493 AKAP14Q86UN6 197 aa2.14□□□□□ -2.07
SQLE-204ENST00000520493 PACRGLQ8N7B6 248 aa2.14□□□□□ -2.07
SQLE-204ENST00000520493 OR13C6PQ8NH95 151 aa2.14□□□□□ -2.07
SQLE-204ENST00000520493 MIEN1Q9BRT3 115 aa2.14□□□□□ -2.07
SQLE-204ENST00000520493 GINS3Q9BRX5 216 aa2.14□□□□□ -2.07
SQLE-204ENST00000520493 PCBD2Q9H0N5 130 aa2.14□□□□□ -2.07
SQLE-204ENST00000520493 BIN3Q9NQY0 253 aa2.14□□□□□ -2.07
SQLE-204ENST00000520493 FUT9Q9Y231 359 aa2.14□□□□□ -2.07
SQLE-204ENST00000520493 FAM215AQ9Y5M1 114 aa2.14□□□□□ -2.07
SQLE-204ENST00000520493 KIF1BO60333 1816 aa2.14□□□□□ -2.07
SQLE-204ENST00000520493 GCN1Q92616 2671 aaKnown RBP2.14□□□□□ -2.07
SQLE-204ENST00000520493 DENND4BO75064 1496 aaPredicted RBP2.14□□□□□ -2.07
SQLE-204ENST00000520493 LRP5O75197 1615 aa2.13□□□□□ -2.07
SQLE-204ENST00000520493 PDE4DIPQ5VU43 2346 aa2.13□□□□□ -2.07
SQLE-204ENST00000520493 HMGXB3Q12766 1538 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms