RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 CSTBP04080 98 aaKnown RBP2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 GAPDHP04406 335 aaKnown RBP2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 HOXB5P09067 269 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 OR8U9P0C7N5 309 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 PGAM2P15259 253 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 NQO2P16083 231 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 RAB5AP20339 215 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 RAB6AP20340 208 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 HOXA5P20719 270 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 FUT3P21217 361 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 PSMB6P28072 239 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 HTR2CP28335 458 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 CEACAM6P40199 344 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 AKR1C3P42330 323 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 NPBWR2P48146 333 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 UBE2E1P51965 193 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 HNRNPA3P51991 378 aaKnown RBP2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 RBM11P57052 281 aaKnown RBP2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 ACTBP60709 375 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 RPL31P62899 125 aaKnown RBP2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 SUPT4H1P63272 117 aaKnown RBP2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 UNC119Q13432 240 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 ZNF124Q15973 351 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 C2orf76Q3KRA6 126 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 SLC22A6Q4U2R8 563 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 PYY3Q5JQD4 70 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 NCR3LG1Q68D85 454 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 TMEM200BQ69YZ2 307 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 Q6P435 159 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 PRSS54Q6PEW0 395 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 TRAT1Q6PIZ9 186 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 LYPD2Q6UXB3 125 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 LINC00322Q6ZN03 302 aaPredicted RBP2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 TMED4Q7Z7H5 227 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 ZNF429Q86V71 674 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 LHFPL1Q86WI0 220 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 HOGA1Q86XE5 327 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 BAP18Q8IXM2 172 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 GAPTQ8N292 157 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 FAM89BQ8N5H3 189 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 CD177Q8N6Q3 437 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 C8orf31Q8N9H6 132 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 ZNRF1Q8ND25 227 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 KLHL30-AS1Q8NEE0 82 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 OR8U1Q8NH10 309 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 SECTM1Q8WVN6 248 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 EMG1Q92979 244 aaKnown RBP2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 SLAMF9Q96A28 289 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 GALNT14Q96FL9 552 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 BSCL2Q96G97 398 aaPredicted RBP2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 C14orf144Q96I85 54 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 SEC22AQ96IW7 307 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 GAFA1Q96PS6 74 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 GPER1Q99527 375 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 CCL13Q99616 98 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 OVOL2Q9BRP0 275 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 TCEAL7Q9BRU2 100 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 C2orf88Q9BSF0 95 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 PDCD10Q9BUL8 212 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 TM2D1Q9BX74 207 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 SIRPDQ9H106 197 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 GAL3ST2Q9H3Q3 398 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 TMPRSS5Q9H3S3 457 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 C11orf1Q9H5F2 150 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 RAB9BQ9NP90 201 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 TREM1Q9NP99 234 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 PARP11Q9NR21 331 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 TAS2R4Q9NYW5 299 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 OR6C3Q9NZP0 311 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 CTSZQ9UBR2 303 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 HSF4Q9ULV5 492 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 ST3GAL6Q9Y274 331 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 MRPS28Q9Y2Q9 187 aaKnown RBP2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 UBE2J1Q9Y385 318 aaPredicted RBP2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 LINC00312Q9Y6C7 94 aa2.37□□□□□ -2.03
SCARNA13-201ENST00000516672 IGHV3OR15-7A0A075B7D8 119 aa2.36□□□□□ -2.03
SCARNA13-201ENST00000516672 A0A087X0M5 115 aa2.36□□□□□ -2.03
SCARNA13-201ENST00000516672 TRGV10A0A0A0MS01 117 aa2.36□□□□□ -2.03
SCARNA13-201ENST00000516672 TRBV6-6A0A0A6YYG2 114 aa2.36□□□□□ -2.03
SCARNA13-201ENST00000516672 TRAV24A0A0B4J272 114 aa2.36□□□□□ -2.03
SCARNA13-201ENST00000516672 IGHV3-64DA0A0J9YX35 117 aa2.36□□□□□ -2.03
SCARNA13-201ENST00000516672 KBTBD11-OT1A0A1B0GTJ5 212 aa2.36□□□□□ -2.03
SCARNA13-201ENST00000516672 A0A1B0GX30 115 aa2.36□□□□□ -2.03
SCARNA13-201ENST00000516672 METTL21EPA6NDL7 271 aa2.36□□□□□ -2.03
SCARNA13-201ENST00000516672 FOXI3A8MTJ6 420 aaPredicted RBP2.36□□□□□ -2.03
SCARNA13-201ENST00000516672 ZNF705EA8MWA4 302 aaPredicted RBP2.36□□□□□ -2.03
SCARNA13-201ENST00000516672 TMEM14DPA8MWL7 114 aa2.36□□□□□ -2.03
SCARNA13-201ENST00000516672 ZNF736B4DX44 427 aaPredicted RBP2.36□□□□□ -2.03
SCARNA13-201ENST00000516672 SLC33A1O00400 549 aaPredicted RBP2.36□□□□□ -2.03
SCARNA13-201ENST00000516672 RS1O15537 224 aa2.36□□□□□ -2.03
SCARNA13-201ENST00000516672 MED6O75586 246 aa2.36□□□□□ -2.03
SCARNA13-201ENST00000516672 FCN3O75636 299 aa2.36□□□□□ -2.03
SCARNA13-201ENST00000516672 OR7C1O76099 320 aaPredicted RBP2.36□□□□□ -2.03
SCARNA13-201ENST00000516672 ZNF205O95201 554 aa2.36□□□□□ -2.03
SCARNA13-201ENST00000516672 SFT2D2O95562 160 aa2.36□□□□□ -2.03
SCARNA13-201ENST00000516672 DIRAS3O95661 229 aa2.36□□□□□ -2.03
SCARNA13-201ENST00000516672 OR2H2O95918 312 aa2.36□□□□□ -2.03
SCARNA13-201ENST00000516672 IFNA10P01566 189 aa2.36□□□□□ -2.03
SCARNA13-201ENST00000516672 MAS1P04201 325 aa2.36□□□□□ -2.03
SCARNA13-201ENST00000516672 S100A9P06702 114 aaKnown RBP2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms