RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 CYB5BO43169 146 aa15.83■□□□□ 0.12
USP53-208ENST00000514305 OR9G9P0C7N8 305 aa15.83■□□□□ 0.12
USP53-208ENST00000514305 ANKRD55Q3KP44 614 aa15.83■□□□□ 0.12
USP53-208ENST00000514305 TEX38Q6PEX7 206 aa15.83■□□□□ 0.12
USP53-208ENST00000514305 UNQ5815/PRO19632Q6UWF5 114 aa15.83■□□□□ 0.12
USP53-208ENST00000514305 LYZL2Q7Z4W2 148 aa15.83■□□□□ 0.12
USP53-208ENST00000514305 LHFPL5Q8TAF8 219 aa15.83■□□□□ 0.12
USP53-208ENST00000514305 QTRT1Q9BXR0 403 aaKnown RBP15.83■□□□□ 0.12
USP53-208ENST00000514305 WNT10AQ9GZT5 417 aa15.83■□□□□ 0.12
USP53-208ENST00000514305 TMEM14BQ9NUH8 114 aa15.83■□□□□ 0.12
USP53-208ENST00000514305 A0A1B0GU03 582 aa15.82■□□□□ 0.12
USP53-208ENST00000514305 A0A1W2PN81 502 aa15.82■□□□□ 0.12
USP53-208ENST00000514305 FBXO24O75426 580 aa15.82■□□□□ 0.12
USP53-208ENST00000514305 TRAPPC2P0DI81 140 aa15.82■□□□□ 0.12
USP53-208ENST00000514305 TRAPPC2BP0DI82 140 aa15.82■□□□□ 0.12
USP53-208ENST00000514305 SLC25A6P12236 298 aa15.82■□□□□ 0.12
USP53-208ENST00000514305 CHRNA7P36544 502 aa15.82■□□□□ 0.12
USP53-208ENST00000514305 HSPE1P61604 102 aaKnown RBP15.82■□□□□ 0.12
USP53-208ENST00000514305 ECSCRQ19T08 205 aa15.82■□□□□ 0.12
USP53-208ENST00000514305 C12orf45Q8N5I9 185 aaPredicted RBP15.82■□□□□ 0.12
USP53-208ENST00000514305 OR5M8Q8NGP6 311 aa15.82■□□□□ 0.12
USP53-208ENST00000514305 FYTTD1Q96QD9 318 aaKnown RBP15.82■□□□□ 0.12
USP53-208ENST00000514305 ENY2Q9NPA8 101 aa15.82■□□□□ 0.12
USP53-208ENST00000514305 COA4Q9NYJ1 87 aa15.82■□□□□ 0.12
USP53-208ENST00000514305 PRKDCP78527 4128 aaKnown RBP15.82■□□□□ 0.12
USP53-208ENST00000514305 IFNA17P01571 189 aa15.81■□□□□ 0.12
USP53-208ENST00000514305 HOXB5P09067 269 aa15.81■□□□□ 0.12
USP53-208ENST00000514305 P0C879 139 aa15.81■□□□□ 0.12
USP53-208ENST00000514305 SMCO1Q147U7 214 aa15.81■□□□□ 0.12
USP53-208ENST00000514305 HIST2H2BDQ6DRA6 164 aa15.81■□□□□ 0.12
USP53-208ENST00000514305 TMEM65Q6PI78 240 aa15.81■□□□□ 0.12
USP53-208ENST00000514305 UXS1Q8NBZ7 420 aa15.81■□□□□ 0.12
USP53-208ENST00000514305 LFNGQ8NES3 379 aa15.81■□□□□ 0.12
USP53-208ENST00000514305 GPR146Q96CH1 333 aa15.81■□□□□ 0.12
USP53-208ENST00000514305 NOL4LQ96MY1 436 aaPredicted RBP15.81■□□□□ 0.12
USP53-208ENST00000514305 NSG2Q9Y328 171 aa15.81■□□□□ 0.12
USP53-208ENST00000514305 WSB1Q9Y6I7 421 aa15.81■□□□□ 0.12
USP53-208ENST00000514305 TRAV3A0A0B4J244 114 aa15.8■□□□□ 0.12
USP53-208ENST00000514305 TEX50A0A1B0GTY4 177 aa15.8■□□□□ 0.12
USP53-208ENST00000514305 LINC01548A6NM66 108 aa15.8■□□□□ 0.12
USP53-208ENST00000514305 G3V4G9 280 aa15.8■□□□□ 0.12
USP53-208ENST00000514305 ELANEP08246 267 aa15.8■□□□□ 0.12
USP53-208ENST00000514305 NDPQ00604 133 aa15.8■□□□□ 0.12
USP53-208ENST00000514305 MRGPRG-AS1Q2M3A8 158 aa15.8■□□□□ 0.12
USP53-208ENST00000514305 TMEM95Q3KNT9 176 aa15.8■□□□□ 0.12
USP53-208ENST00000514305 OR5AU1Q8NGC0 362 aa15.8■□□□□ 0.12
USP53-208ENST00000514305 OR52E5Q8NH55 327 aa15.8■□□□□ 0.12
USP53-208ENST00000514305 OR1S1Q8NH92 325 aa15.8■□□□□ 0.12
USP53-208ENST00000514305 SEC22CQ9BRL7 303 aa15.8■□□□□ 0.12
USP53-208ENST00000514305 FAM103A1Q9BTL3 118 aaKnown RBP15.8■□□□□ 0.12
USP53-208ENST00000514305 HINT2Q9BX68 163 aa15.8■□□□□ 0.12
USP53-208ENST00000514305 PRR13Q9NZ81 148 aa15.8■□□□□ 0.12
USP53-208ENST00000514305 CACNG5Q9UF02 275 aa15.8■□□□□ 0.12
USP53-208ENST00000514305 LINC00527Q9UJ94 153 aa15.8■□□□□ 0.12
USP53-208ENST00000514305 H3BUA1 57 aa15.79■□□□□ 0.12
USP53-208ENST00000514305 OR2B8PP59922 312 aa15.79■□□□□ 0.12
USP53-208ENST00000514305 ERHP84090 104 aaKnown RBP15.79■□□□□ 0.12
USP53-208ENST00000514305 NSUN5P1Q3KNT7 163 aa15.79■□□□□ 0.12
USP53-208ENST00000514305 NMSQ5H8A3 153 aa15.79■□□□□ 0.12
USP53-208ENST00000514305 CXorf66Q5JRM2 361 aaPredicted RBP15.79■□□□□ 0.12
USP53-208ENST00000514305 OR52B4Q8NGK2 314 aa15.79■□□□□ 0.12
USP53-208ENST00000514305 PLEKHA3Q9HB20 300 aa15.79■□□□□ 0.12
USP53-208ENST00000514305 A0A0B4J293 547 aa15.78■□□□□ 0.12
USP53-208ENST00000514305 EGR2P11161 476 aaPredicted RBP15.78■□□□□ 0.12
USP53-208ENST00000514305 SPCS3P61009 180 aa15.78■□□□□ 0.12
USP53-208ENST00000514305 FOXE3Q13461 319 aa15.78■□□□□ 0.12
USP53-208ENST00000514305 BEAN1Q3B7T3 259 aa15.78■□□□□ 0.12
USP53-208ENST00000514305 GGNBP1Q5YKI7 109 aa15.78■□□□□ 0.12
USP53-208ENST00000514305 OR1L6Q8NGR2 347 aa15.78■□□□□ 0.12
USP53-208ENST00000514305 SLA2Q9H6Q3 261 aa15.78■□□□□ 0.12
USP53-208ENST00000514305 NDUFA4L2Q9NRX3 87 aa15.78■□□□□ 0.12
USP53-208ENST00000514305 FAM90A26D6RGX4 464 aa15.77■□□□□ 0.12
USP53-208ENST00000514305 MED6O75586 246 aa15.77■□□□□ 0.12
USP53-208ENST00000514305 LY86O95711 162 aa15.77■□□□□ 0.12
USP53-208ENST00000514305 IGHG4P01861 327 aa15.77■□□□□ 0.12
USP53-208ENST00000514305 CD28P10747 220 aa15.77■□□□□ 0.12
USP53-208ENST00000514305 DEFA4P12838 97 aa15.77■□□□□ 0.12
USP53-208ENST00000514305 PPIFP30405 207 aaKnown RBP15.77■□□□□ 0.12
USP53-208ENST00000514305 SSBP2P81877 361 aaPredicted RBP15.77■□□□□ 0.12
USP53-208ENST00000514305 PRCDQ00LT1 54 aa15.77■□□□□ 0.12
USP53-208ENST00000514305 SAMD5Q5TGI4 173 aa15.77■□□□□ 0.12
USP53-208ENST00000514305 NDUFA11Q86Y39 141 aa15.77■□□□□ 0.12
USP53-208ENST00000514305 TTC9CQ8N5M4 171 aa15.77■□□□□ 0.12
USP53-208ENST00000514305 OR4F17Q8NGA8 305 aa15.77■□□□□ 0.12
USP53-208ENST00000514305 OR4F4Q96R69 305 aa15.77■□□□□ 0.12
USP53-208ENST00000514305 ZNF355PQ9NSJ1 428 aa15.77■□□□□ 0.12
USP53-208ENST00000514305 A0A0G2JRQ6 117 aa15.76■□□□□ 0.11
USP53-208ENST00000514305 NPIPB5A8MRT5 1133 aa15.76■□□□□ 0.11
USP53-208ENST00000514305 G3V318 75 aa15.76■□□□□ 0.11
USP53-208ENST00000514305 ST8SIA3O43173 380 aa15.76■□□□□ 0.11
USP53-208ENST00000514305 SSNA1O43805 119 aa15.76■□□□□ 0.11
USP53-208ENST00000514305 HIST1H1BP16401 226 aaKnown RBP15.76■□□□□ 0.11
USP53-208ENST00000514305 SUB1P53999 127 aaKnown RBP eCLIP15.76■□□□□ 0.11
USP53-208ENST00000514305 OXA1LQ15070 435 aa15.76■□□□□ 0.11
USP53-208ENST00000514305 TATDN3Q17R31 274 aa15.76■□□□□ 0.11
USP53-208ENST00000514305 C10orf55Q5SWW7 151 aa15.76■□□□□ 0.11
USP53-208ENST00000514305 ZNF329Q86UD4 541 aa15.76■□□□□ 0.11
USP53-208ENST00000514305 HIPK2Q9H2X6 1198 aa15.76■□□□□ 0.11
USP53-208ENST00000514305 ZFP57Q9NU63 452 aa15.76■□□□□ 0.11
USP53-208ENST00000514305 THYN1Q9P016 225 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms