RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 XAF1Q6GPH4 301 aa3.55□□□□□ -1.84
VCAN-209ENST00000513016 ERASQ7Z444 233 aa3.55□□□□□ -1.84
VCAN-209ENST00000513016 LRTM2Q8N967 370 aa3.55□□□□□ -1.84
VCAN-209ENST00000513016 KLHL30-AS1Q8NEE0 82 aa3.55□□□□□ -1.84
VCAN-209ENST00000513016 NUP205Q92621 2012 aa3.55□□□□□ -1.84
VCAN-209ENST00000513016 TRAV21A0A0B4J279 112 aa3.55□□□□□ -1.84
VCAN-209ENST00000513016 IGHV3-35A0A0C4DH35 117 aa3.55□□□□□ -1.84
VCAN-209ENST00000513016 OR11H12B2RN74 326 aa3.55□□□□□ -1.84
VCAN-209ENST00000513016 IGHV3-23P01764 117 aa3.55□□□□□ -1.84
VCAN-209ENST00000513016 HLA-DRB1P01911 266 aa3.55□□□□□ -1.84
VCAN-209ENST00000513016 MALP21145 153 aa3.55□□□□□ -1.84
VCAN-209ENST00000513016 MFAP2P55001 183 aa3.55□□□□□ -1.84
VCAN-209ENST00000513016 RPS11P62280 158 aaKnown RBP eCLIP3.55□□□□□ -1.84
VCAN-209ENST00000513016 COTL1Q14019 142 aa3.55□□□□□ -1.84
VCAN-209ENST00000513016 ICAM4Q14773 271 aa3.55□□□□□ -1.84
VCAN-209ENST00000513016 VAMP3Q15836 100 aa3.55□□□□□ -1.84
VCAN-209ENST00000513016 LINC00305Q7Z4B0 112 aa3.55□□□□□ -1.84
VCAN-209ENST00000513016 PIP4P2Q8N4L2 257 aa3.55□□□□□ -1.84
VCAN-209ENST00000513016 ZNF502Q8TBZ5 544 aa3.55□□□□□ -1.84
VCAN-209ENST00000513016 RAB37Q96AX2 223 aa3.55□□□□□ -1.84
VCAN-209ENST00000513016 PRELID3AQ96N28 172 aa3.55□□□□□ -1.84
VCAN-209ENST00000513016 ANKRD12Q6UB98 2062 aa3.55□□□□□ -1.84
VCAN-209ENST00000513016 A0A1W2PP11 408 aa3.55□□□□□ -1.84
VCAN-209ENST00000513016 FAM223BA6NKX1 122 aa3.55□□□□□ -1.84
VCAN-209ENST00000513016 NBEAP1P0C6P0 100 aa3.55□□□□□ -1.84
VCAN-209ENST00000513016 TMEM183BQ1AE95 376 aa3.55□□□□□ -1.84
VCAN-209ENST00000513016 FAM223AQ8IWN6 122 aa3.55□□□□□ -1.84
VCAN-209ENST00000513016 FAM131CQ96AQ9 280 aa3.55□□□□□ -1.84
VCAN-209ENST00000513016 XIRP1Q702N8 1843 aaKnown RBP3.55□□□□□ -1.84
VCAN-209ENST00000513016 TRBV7-1A0A0A6YYK4 115 aa3.55□□□□□ -1.84
VCAN-209ENST00000513016 TNFSF13O75888 250 aa3.55□□□□□ -1.84
VCAN-209ENST00000513016 MST1P26927 711 aa3.55□□□□□ -1.84
VCAN-209ENST00000513016 C11orf91Q3C1V1 193 aa3.55□□□□□ -1.84
VCAN-209ENST00000513016 ZNF585BQ52M93 769 aa3.55□□□□□ -1.84
VCAN-209ENST00000513016 IGF2-ASQ6U949 168 aa3.55□□□□□ -1.84
VCAN-209ENST00000513016 HEPN1Q6WQI6 88 aa3.55□□□□□ -1.84
VCAN-209ENST00000513016 SLC7A5P1Q8MH63 180 aa3.55□□□□□ -1.84
VCAN-209ENST00000513016 RPUSD1Q9UJJ7 312 aaKnown RBP3.55□□□□□ -1.84
VCAN-209ENST00000513016 C15orf61A6NNL5 157 aa3.55□□□□□ -1.84
VCAN-209ENST00000513016 PRCDQ00LT1 54 aa3.55□□□□□ -1.84
VCAN-209ENST00000513016 GOLT1AQ6ZVE7 132 aa3.55□□□□□ -1.84
VCAN-209ENST00000513016 C10orf111Q8N326 155 aa3.55□□□□□ -1.84
VCAN-209ENST00000513016 PRR13Q9NZ81 148 aa3.55□□□□□ -1.84
VCAN-209ENST00000513016 TMEM218A2RU14 115 aa3.55□□□□□ -1.84
VCAN-209ENST00000513016 SRRM5B3KS81 715 aa3.55□□□□□ -1.84
VCAN-209ENST00000513016 CD74P04233 296 aa3.55□□□□□ -1.84
VCAN-209ENST00000513016 Q6AWC8 147 aa3.55□□□□□ -1.84
VCAN-209ENST00000513016 OR10S1Q8NGN2 331 aa3.55□□□□□ -1.84
VCAN-209ENST00000513016 BPESC1Q9GZL8 116 aa3.55□□□□□ -1.84
VCAN-209ENST00000513016 IGHV2-26A0A0B4J1V2 119 aa3.55□□□□□ -1.84
VCAN-209ENST00000513016 PDZD11Q5EBL8 140 aa3.55□□□□□ -1.84
VCAN-209ENST00000513016 TEX261Q6UWH6 196 aa3.55□□□□□ -1.84
VCAN-209ENST00000513016 LINC00114Q6XXX2 140 aa3.55□□□□□ -1.84
VCAN-209ENST00000513016 LCNL1Q6ZST4 164 aa3.55□□□□□ -1.84
VCAN-209ENST00000513016 SLC25A38Q96DW6 304 aa3.55□□□□□ -1.84
VCAN-209ENST00000513016 MRPL13Q9BYD1 178 aaKnown RBP3.55□□□□□ -1.84
VCAN-209ENST00000513016 A0A1B0GW15 77 aa3.54□□□□□ -1.84
VCAN-209ENST00000513016 FAM90A9PA6NNJ1 464 aa3.54□□□□□ -1.84
VCAN-209ENST00000513016 TMEM250H0YL14 139 aa3.54□□□□□ -1.84
VCAN-209ENST00000513016 BCL2P10415 239 aa3.54□□□□□ -1.84
VCAN-209ENST00000513016 PRTN3P24158 256 aa3.54□□□□□ -1.84
VCAN-209ENST00000513016 APOC4P55056 127 aa3.54□□□□□ -1.84
VCAN-209ENST00000513016 ZNF345Q14585 488 aa3.54□□□□□ -1.84
VCAN-209ENST00000513016 OR8A1Q8NGG7 326 aa3.54□□□□□ -1.84
VCAN-209ENST00000513016 EGR1P18146 543 aa3.54□□□□□ -1.84
VCAN-209ENST00000513016 MORN2Q502X0 79 aa3.54□□□□□ -1.84
VCAN-209ENST00000513016 SGMS2Q8NHU3 365 aa3.54□□□□□ -1.84
VCAN-209ENST00000513016 FUT9Q9Y231 359 aa3.54□□□□□ -1.84
VCAN-209ENST00000513016 ZNFX1Q9P2E3 1918 aaKnown RBP3.54□□□□□ -1.84
VCAN-209ENST00000513016 IGHV3-49A0A0A0MS15 119 aa3.54□□□□□ -1.84
VCAN-209ENST00000513016 IGHV1-8P0DP01 117 aa3.54□□□□□ -1.84
VCAN-209ENST00000513016 JOSD1Q15040 202 aaPredicted RBP3.54□□□□□ -1.84
VCAN-209ENST00000513016 FAM219BQ5XKK7 198 aa3.54□□□□□ -1.84
VCAN-209ENST00000513016 TOMM20LQ6UXN7 152 aa3.54□□□□□ -1.84
VCAN-209ENST00000513016 GGNQ86UU5 652 aa3.54□□□□□ -1.84
VCAN-209ENST00000513016 OR5AN1Q8NGI8 311 aa3.54□□□□□ -1.84
VCAN-209ENST00000513016 NUDT11Q96G61 164 aa3.54□□□□□ -1.84
VCAN-209ENST00000513016 SBF2Q86WG5 1849 aa3.54□□□□□ -1.84
VCAN-209ENST00000513016 IGHV3OR16-13A0A075B7E8 117 aa3.54□□□□□ -1.84
VCAN-209ENST00000513016 IGHV3-74A0A0B4J1X5 117 aa3.54□□□□□ -1.84
VCAN-209ENST00000513016 LINC01549A6NIU2 74 aa3.54□□□□□ -1.84
VCAN-209ENST00000513016 HLA-DQA1P01909 254 aa3.54□□□□□ -1.84
VCAN-209ENST00000513016 RNASE4P34096 147 aaKnown RBP3.54□□□□□ -1.84
VCAN-209ENST00000513016 CD81P60033 236 aa3.54□□□□□ -1.84
VCAN-209ENST00000513016 CACNG7P62955 275 aa3.54□□□□□ -1.84
VCAN-209ENST00000513016 FOXL1Q12952 345 aa3.54□□□□□ -1.84
VCAN-209ENST00000513016 STPG2Q8N412 459 aa3.54□□□□□ -1.84
VCAN-209ENST00000513016 CYB561D1Q8N8Q1 229 aa3.54□□□□□ -1.84
VCAN-209ENST00000513016 REG4Q9BYZ8 158 aa3.54□□□□□ -1.84
VCAN-209ENST00000513016 OTORQ9NRC9 128 aa3.54□□□□□ -1.84
VCAN-209ENST00000513016 CNTRLQ7Z7A1 2325 aa3.54□□□□□ -1.84
VCAN-209ENST00000513016 IGHV3-66A0A0C4DH42 116 aa3.54□□□□□ -1.84
VCAN-209ENST00000513016 LOC389332A0A1B0GUA5 103 aa3.54□□□□□ -1.84
VCAN-209ENST00000513016 CEACAM8P31997 349 aaPredicted RBP3.54□□□□□ -1.84
VCAN-209ENST00000513016 IER3P46695 156 aa3.54□□□□□ -1.84
VCAN-209ENST00000513016 ZNF415Q09FC8 603 aa3.54□□□□□ -1.84
VCAN-209ENST00000513016 TCF15Q12870 199 aa3.54□□□□□ -1.84
VCAN-209ENST00000513016 SRSF7Q16629 238 aaKnown RBP eCLIP3.54□□□□□ -1.84
VCAN-209ENST00000513016 PSMG4Q5JS54 123 aa3.54□□□□□ -1.84
VCAN-209ENST00000513016 FAM71F2Q6NXP2 309 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms