RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 LRP1Q07954 4544 aaKnown RBP-0.08□□□□□ -2.42
PDGFC-208ENST00000512711 CEP192Q8TEP8 1941 aa-0.09□□□□□ -2.42
PDGFC-208ENST00000512711 NBPF19A0A087WUL8 3843 aa-0.09□□□□□ -2.42
PDGFC-208ENST00000512711 LAMA3Q16787 3333 aa-0.09□□□□□ -2.42
PDGFC-208ENST00000512711 CELSR1Q9NYQ6 3014 aa-0.09□□□□□ -2.42
PDGFC-208ENST00000512711 TRBV6-8A0A0A6YYG3 113 aa-0.09□□□□□ -2.42
PDGFC-208ENST00000512711 C5orf49A4QMS7 147 aa-0.09□□□□□ -2.42
PDGFC-208ENST00000512711 OR2T8A6NH00 312 aa-0.09□□□□□ -2.42
PDGFC-208ENST00000512711 H0YC42 278 aa-0.09□□□□□ -2.42
PDGFC-208ENST00000512711 HMMRO75330 724 aa-0.09□□□□□ -2.42
PDGFC-208ENST00000512711 ASAH2BP0C7U1 165 aa-0.09□□□□□ -2.42
PDGFC-208ENST00000512711 SFTPCP11686 197 aa-0.09□□□□□ -2.42
PDGFC-208ENST00000512711 RPS4Y1P22090 263 aaKnown RBP-0.09□□□□□ -2.42
PDGFC-208ENST00000512711 NFYAP23511 347 aaPredicted RBP-0.09□□□□□ -2.42
PDGFC-208ENST00000512711 FKBP2P26885 142 aaKnown RBP-0.09□□□□□ -2.42
PDGFC-208ENST00000512711 CD40LGP29965 261 aa-0.09□□□□□ -2.42
PDGFC-208ENST00000512711 EFNA4P52798 201 aa-0.09□□□□□ -2.42
PDGFC-208ENST00000512711 CARD18P57730 90 aa-0.09□□□□□ -2.42
PDGFC-208ENST00000512711 OR4D2P58180 307 aa-0.09□□□□□ -2.42
PDGFC-208ENST00000512711 RAB4BP61018 213 aa-0.09□□□□□ -2.42
PDGFC-208ENST00000512711 SUPT4H1P63272 117 aaKnown RBP-0.09□□□□□ -2.42
PDGFC-208ENST00000512711 DMTNQ08495 405 aa-0.09□□□□□ -2.42
PDGFC-208ENST00000512711 CLEC12BQ2HXU8 276 aa-0.09□□□□□ -2.42
PDGFC-208ENST00000512711 ST13P4Q8IZP2 240 aaPredicted RBP-0.09□□□□□ -2.42
PDGFC-208ENST00000512711 BLIDQ8IZY5 108 aa-0.09□□□□□ -2.42
PDGFC-208ENST00000512711 LINC00311Q8N616 119 aa-0.09□□□□□ -2.42
PDGFC-208ENST00000512711 OR2T27Q8NH04 317 aa-0.09□□□□□ -2.42
PDGFC-208ENST00000512711 STOML3Q8TAV4 291 aa-0.09□□□□□ -2.42
PDGFC-208ENST00000512711 ZNF418Q8TF45 676 aaPredicted RBP-0.09□□□□□ -2.42
PDGFC-208ENST00000512711 ANKRD7Q92527 254 aa-0.09□□□□□ -2.42
PDGFC-208ENST00000512711 TMEM106AQ96A25 262 aa-0.09□□□□□ -2.42
PDGFC-208ENST00000512711 CCDC124Q96CT7 223 aaKnown RBP-0.09□□□□□ -2.42
PDGFC-208ENST00000512711 GNPNAT1Q96EK6 184 aaPredicted RBP-0.09□□□□□ -2.42
PDGFC-208ENST00000512711 ANKRD36BP1Q96IX9 119 aa-0.09□□□□□ -2.42
PDGFC-208ENST00000512711 CYTH2Q99418 400 aa-0.09□□□□□ -2.42
PDGFC-208ENST00000512711 CCL13Q99616 98 aa-0.09□□□□□ -2.42
PDGFC-208ENST00000512711 SLC22A4Q9H015 551 aa-0.09□□□□□ -2.42
PDGFC-208ENST00000512711 XAGE1AQ9HD64 81 aa-0.09□□□□□ -2.42
PDGFC-208ENST00000512711 ASCL3Q9NQ33 180 aa-0.09□□□□□ -2.42
PDGFC-208ENST00000512711 CDC42SE1Q9NRR8 79 aa-0.09□□□□□ -2.42
PDGFC-208ENST00000512711 POFUT2Q9Y2G5 429 aa-0.09□□□□□ -2.42
PDGFC-208ENST00000512711 CASP8AP2Q9UKL3 1982 aa-0.09□□□□□ -2.42
PDGFC-208ENST00000512711 FASNP49327 2511 aaKnown RBP-0.09□□□□□ -2.42
PDGFC-208ENST00000512711 DNAH7Q8WXX0 4024 aa-0.09□□□□□ -2.42
PDGFC-208ENST00000512711 COL6A5A8TX70 2615 aa-0.09□□□□□ -2.42
PDGFC-208ENST00000512711 KIAA0232Q92628 1395 aa-0.09□□□□□ -2.42
PDGFC-208ENST00000512711 HSPG2P98160 4391 aa-0.09□□□□□ -2.42
PDGFC-208ENST00000512711 RALGAPA2Q2PPJ7 1873 aa-0.1□□□□□ -2.42
PDGFC-208ENST00000512711 MAP3K19Q56UN5 1328 aa-0.1□□□□□ -2.42
PDGFC-208ENST00000512711 HECTD4Q9Y4D8 3996 aa-0.1□□□□□ -2.42
PDGFC-208ENST00000512711 DSPP15924 2871 aaKnown RBP-0.1□□□□□ -2.43
PDGFC-208ENST00000512711 LAMA2P24043 3122 aaKnown RBP-0.1□□□□□ -2.43
PDGFC-208ENST00000512711 LPAP08519 4548 aa-0.1□□□□□ -2.43
PDGFC-208ENST00000512711 E9PCH4 1651 aa-0.1□□□□□ -2.43
PDGFC-208ENST00000512711 PDZD2O15018 2839 aa-0.1□□□□□ -2.43
PDGFC-208ENST00000512711 TRAV1-1A0A0B4J248 108 aa-0.1□□□□□ -2.43
PDGFC-208ENST00000512711 A0A0D9SG42 100 aa-0.1□□□□□ -2.43
PDGFC-208ENST00000512711 A0A1B0GW54 56 aa-0.1□□□□□ -2.43
PDGFC-208ENST00000512711 CCDC160A6NGH7 325 aa-0.1□□□□□ -2.43
PDGFC-208ENST00000512711 C2orf70A6NJV1 201 aa-0.1□□□□□ -2.43
PDGFC-208ENST00000512711 NDUFS8O00217 210 aa-0.1□□□□□ -2.43
PDGFC-208ENST00000512711 SYNGR1O43759 233 aa-0.1□□□□□ -2.43
PDGFC-208ENST00000512711 OR1I1O60431 355 aa-0.1□□□□□ -2.43
PDGFC-208ENST00000512711 STX10O60499 249 aa-0.1□□□□□ -2.43
PDGFC-208ENST00000512711 NEMFO60524 1076 aa-0.1□□□□□ -2.43
PDGFC-208ENST00000512711 APOMO95445 188 aa-0.1□□□□□ -2.43
PDGFC-208ENST00000512711 IGHV3-7P01780 117 aa-0.1□□□□□ -2.43
PDGFC-208ENST00000512711 GP1BAP07359 652 aa-0.1□□□□□ -2.43
PDGFC-208ENST00000512711 CCDC172P0C7W6 258 aa-0.1□□□□□ -2.43
PDGFC-208ENST00000512711 SLC35E2BP0CK96 405 aa-0.1□□□□□ -2.43
PDGFC-208ENST00000512711 CCL2P13500 99 aa-0.1□□□□□ -2.43
PDGFC-208ENST00000512711 SPI1P17947 270 aa-0.1□□□□□ -2.43
PDGFC-208ENST00000512711 MIPP30301 263 aa-0.1□□□□□ -2.43
PDGFC-208ENST00000512711 LCN1P31025 176 aa-0.1□□□□□ -2.43
PDGFC-208ENST00000512711 C4orf26Q17RF5 130 aa-0.1□□□□□ -2.43
PDGFC-208ENST00000512711 HLA-DRB5Q30154 266 aa-0.1□□□□□ -2.43
PDGFC-208ENST00000512711 KRTAP20-2Q3LI61 65 aa-0.1□□□□□ -2.43
PDGFC-208ENST00000512711 SPINK9Q5DT21 86 aa-0.1□□□□□ -2.43
PDGFC-208ENST00000512711 RNASE10Q5GAN6 216 aaKnown RBP-0.1□□□□□ -2.43
PDGFC-208ENST00000512711 RBM48Q5RL73 367 aaKnown RBP-0.1□□□□□ -2.43
PDGFC-208ENST00000512711 TEX261Q6UWH6 196 aa-0.1□□□□□ -2.43
PDGFC-208ENST00000512711 HIST2H3AQ71DI3 136 aa-0.1□□□□□ -2.43
PDGFC-208ENST00000512711 RIBC1Q8N443 379 aaPredicted RBP-0.1□□□□□ -2.43
PDGFC-208ENST00000512711 UBL4BQ8N7F7 174 aa-0.1□□□□□ -2.43
PDGFC-208ENST00000512711 OR52E4Q8NGH9 312 aa-0.1□□□□□ -2.43
PDGFC-208ENST00000512711 OR5AK3PQ8NH89 298 aa-0.1□□□□□ -2.43
PDGFC-208ENST00000512711 C11orf40Q8WZ69 217 aa-0.1□□□□□ -2.43
PDGFC-208ENST00000512711 RORBQ92753 470 aa-0.1□□□□□ -2.43
PDGFC-208ENST00000512711 RBP7Q96R05 134 aa-0.1□□□□□ -2.43
PDGFC-208ENST00000512711 TMEM147Q9BVK8 224 aa-0.1□□□□□ -2.43
PDGFC-208ENST00000512711 BBS2Q9BXC9 721 aa-0.1□□□□□ -2.43
PDGFC-208ENST00000512711 WDR54Q9H977 334 aa-0.1□□□□□ -2.43
PDGFC-208ENST00000512711 GPR84Q9NQS5 396 aa-0.1□□□□□ -2.43
PDGFC-208ENST00000512711 PAQR5Q9NXK6 330 aaPredicted RBP-0.1□□□□□ -2.43
PDGFC-208ENST00000512711 FUT9Q9Y231 359 aa-0.1□□□□□ -2.43
PDGFC-208ENST00000512711 COQ4Q9Y3A0 265 aa-0.1□□□□□ -2.43
PDGFC-208ENST00000512711 U3KQ87 197 aa-0.1□□□□□ -2.43
PDGFC-208ENST00000512711 DOCK3Q8IZD9 2030 aa-0.1□□□□□ -2.43
PDGFC-208ENST00000512711 JMJD1CQ15652 2540 aa-0.1□□□□□ -2.43
PDGFC-208ENST00000512711 SRRM2Q9UQ35 2752 aaKnown RBP-0.1□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms