RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 A6NJ64 397 aa5.39□□□□□ -1.55
USP46-208ENST00000512656 A8MWP6 167 aa5.39□□□□□ -1.55
USP46-208ENST00000512656 NDUFB8O95169 186 aa5.39□□□□□ -1.55
USP46-208ENST00000512656 IGLV2-14P01704 120 aa5.39□□□□□ -1.55
USP46-208ENST00000512656 HLA-AP01891 365 aaKnown RBP5.39□□□□□ -1.55
USP46-208ENST00000512656 RBMY1DP0C7P1 496 aaKnown RBP5.39□□□□□ -1.55
USP46-208ENST00000512656 IGKV1-13P0DP09 117 aa5.39□□□□□ -1.55
USP46-208ENST00000512656 NQO2P16083 231 aa5.39□□□□□ -1.55
USP46-208ENST00000512656 CTRB1P17538 263 aa5.39□□□□□ -1.55
USP46-208ENST00000512656 HLA-GP17693 338 aa5.39□□□□□ -1.55
USP46-208ENST00000512656 PSMB9P28065 219 aa5.39□□□□□ -1.55
USP46-208ENST00000512656 FCGR2CP31995 323 aa5.39□□□□□ -1.55
USP46-208ENST00000512656 CATR1Q13166 79 aa5.39□□□□□ -1.55
USP46-208ENST00000512656 KLK9Q2XQG4 91 aa5.39□□□□□ -1.55
USP46-208ENST00000512656 UBE2UQ5VVX9 321 aa5.39□□□□□ -1.55
USP46-208ENST00000512656 CTRB2Q6GPI1 263 aa5.39□□□□□ -1.55
USP46-208ENST00000512656 SFXN4Q6P4A7 337 aa5.39□□□□□ -1.55
USP46-208ENST00000512656 Q6ZRM9 215 aa5.39□□□□□ -1.55
USP46-208ENST00000512656 RBPMS2Q6ZRY4 209 aaKnown RBP5.39□□□□□ -1.55
USP46-208ENST00000512656 SSX9Q7RTT3 188 aa5.39□□□□□ -1.55
USP46-208ENST00000512656 NR2C2APQ86WQ0 139 aa5.39□□□□□ -1.55
USP46-208ENST00000512656 SLC38A6Q8IZM9 456 aa5.39□□□□□ -1.55
USP46-208ENST00000512656 SPAG16Q8N0X2 631 aa5.39□□□□□ -1.55
USP46-208ENST00000512656 UXS1Q8NBZ7 420 aa5.39□□□□□ -1.55
USP46-208ENST00000512656 BEST4Q8NFU0 473 aa5.39□□□□□ -1.55
USP46-208ENST00000512656 SECTM1Q8WVN6 248 aa5.39□□□□□ -1.55
USP46-208ENST00000512656 BORCS5Q969J3 196 aa5.39□□□□□ -1.55
USP46-208ENST00000512656 SRSF8Q9BRL6 282 aaKnown RBP5.39□□□□□ -1.55
USP46-208ENST00000512656 GGTLC1Q9BX51 225 aa5.39□□□□□ -1.55
USP46-208ENST00000512656 COMMD5Q9GZQ3 224 aa5.39□□□□□ -1.55
USP46-208ENST00000512656 HRASLSQ9HDD0 168 aa5.39□□□□□ -1.55
USP46-208ENST00000512656 TXNL4BQ9NX01 149 aaKnown RBP5.39□□□□□ -1.55
USP46-208ENST00000512656 RHBDL2Q9NX52 303 aa5.39□□□□□ -1.55
USP46-208ENST00000512656 KLK9Q9UKQ9 250 aa5.39□□□□□ -1.55
USP46-208ENST00000512656 UFC1Q9Y3C8 167 aa5.39□□□□□ -1.55
USP46-208ENST00000512656 DMRT1Q9Y5R6 373 aa5.39□□□□□ -1.55
USP46-208ENST00000512656 ETV7Q9Y603 341 aa5.39□□□□□ -1.55
USP46-208ENST00000512656 BIRC6Q9NR09 4857 aa5.38□□□□□ -1.55
USP46-208ENST00000512656 IGLV11-55A0A075B6I3 123 aa5.38□□□□□ -1.55
USP46-208ENST00000512656 TRAV18A0A075B6X5 111 aa5.38□□□□□ -1.55
USP46-208ENST00000512656 LOC102724200A0A096LPH7 203 aaPredicted RBP5.38□□□□□ -1.55
USP46-208ENST00000512656 TMEM213A2RRL7 107 aa5.38□□□□□ -1.55
USP46-208ENST00000512656 SMIM30A4D0T7 59 aa5.38□□□□□ -1.55
USP46-208ENST00000512656 TNFSF12O43508 249 aa5.38□□□□□ -1.55
USP46-208ENST00000512656 SSX5O60225 188 aa5.38□□□□□ -1.55
USP46-208ENST00000512656 HPRT1P00492 218 aa5.38□□□□□ -1.55
USP46-208ENST00000512656 IGHV3-23P01764 117 aa5.38□□□□□ -1.55
USP46-208ENST00000512656 CLEC3BP05452 202 aa5.38□□□□□ -1.55
USP46-208ENST00000512656 FGF2P09038 288 aa5.38□□□□□ -1.55
USP46-208ENST00000512656 MYOD1P15172 320 aa5.38□□□□□ -1.55
USP46-208ENST00000512656 AREGP15514 252 aa5.38□□□□□ -1.55
USP46-208ENST00000512656 CBX5P45973 191 aa5.38□□□□□ -1.55
USP46-208ENST00000512656 ELLP55199 621 aaPredicted RBP5.38□□□□□ -1.55
USP46-208ENST00000512656 TAS2R31P59538 309 aa5.38□□□□□ -1.55
USP46-208ENST00000512656 OR2B8PP59922 312 aa5.38□□□□□ -1.55
USP46-208ENST00000512656 EIF4EBP1Q13541 118 aaPredicted RBP5.38□□□□□ -1.55
USP46-208ENST00000512656 KRTAP15-1Q3LI76 137 aa5.38□□□□□ -1.55
USP46-208ENST00000512656 TIMM50Q3ZCQ8 353 aa5.38□□□□□ -1.55
USP46-208ENST00000512656 THOC7Q6I9Y2 204 aaKnown RBP5.38□□□□□ -1.55
USP46-208ENST00000512656 PLET1Q6UQ28 207 aa5.38□□□□□ -1.55
USP46-208ENST00000512656 C19orf35Q6ZS72 473 aa5.38□□□□□ -1.55
USP46-208ENST00000512656 HSD17B13Q7Z5P4 300 aaPredicted RBP5.38□□□□□ -1.55
USP46-208ENST00000512656 HOGA1Q86XE5 327 aa5.38□□□□□ -1.55
USP46-208ENST00000512656 TMEM61Q8N0U2 210 aa5.38□□□□□ -1.55
USP46-208ENST00000512656 LILRB2Q8N423 598 aa5.38□□□□□ -1.55
USP46-208ENST00000512656 OR13F1Q8NGS4 319 aa5.38□□□□□ -1.55
USP46-208ENST00000512656 LGALS14Q8TCE9 139 aa5.38□□□□□ -1.55
USP46-208ENST00000512656 CACNG8Q8WXS5 425 aa5.38□□□□□ -1.55
USP46-208ENST00000512656 YTHDF1Q9BYJ9 559 aaKnown RBP5.38□□□□□ -1.55
USP46-208ENST00000512656 SLC5A7Q9GZV3 580 aa5.38□□□□□ -1.55
USP46-208ENST00000512656 WFDC10AQ9H1F0 79 aa5.38□□□□□ -1.55
USP46-208ENST00000512656 Q9H521 79 aa5.38□□□□□ -1.55
USP46-208ENST00000512656 DIABLOQ9NR28 239 aa5.38□□□□□ -1.55
USP46-208ENST00000512656 MRPL27Q9P0M9 148 aaKnown RBP5.38□□□□□ -1.55
USP46-208ENST00000512656 EPPK1P58107 5090 aaKnown RBP5.38□□□□□ -1.55
USP46-208ENST00000512656 A0A1B0GW64 132 aa5.37□□□□□ -1.55
USP46-208ENST00000512656 E7EUB6 86 aa5.37□□□□□ -1.55
USP46-208ENST00000512656 SULT1C2O00338 296 aa5.37□□□□□ -1.55
USP46-208ENST00000512656 UPK2O00526 184 aa5.37□□□□□ -1.55
USP46-208ENST00000512656 TMEM127O75204 238 aa5.37□□□□□ -1.55
USP46-208ENST00000512656 SCAF4O95104 1147 aaKnown RBP5.37□□□□□ -1.55
USP46-208ENST00000512656 PPYP01298 95 aa5.37□□□□□ -1.55
USP46-208ENST00000512656 REG1AP05451 166 aa5.37□□□□□ -1.55
USP46-208ENST00000512656 PTBP1P26599 531 aaKnown RBP eCLIP5.37□□□□□ -1.55
USP46-208ENST00000512656 GPR183P32249 361 aa5.37□□□□□ -1.55
USP46-208ENST00000512656 APOC4P55056 127 aa5.37□□□□□ -1.55
USP46-208ENST00000512656 BRWD1-AS2P59051 145 aa5.37□□□□□ -1.55
USP46-208ENST00000512656 ERVK-16P61578 105 aa5.37□□□□□ -1.55
USP46-208ENST00000512656 POU2AF1Q16633 256 aa5.37□□□□□ -1.55
USP46-208ENST00000512656 IDNKQ5T6J7 187 aa5.37□□□□□ -1.55
USP46-208ENST00000512656 LAMTOR1Q6IAA8 161 aa5.37□□□□□ -1.55
USP46-208ENST00000512656 BTNL8Q6UX41 500 aa5.37□□□□□ -1.55
USP46-208ENST00000512656 SPARTQ8N0X7 666 aa5.37□□□□□ -1.55
USP46-208ENST00000512656 DMBX1Q8NFW5 382 aa5.37□□□□□ -1.55
USP46-208ENST00000512656 OR1L6Q8NGR2 347 aa5.37□□□□□ -1.55
USP46-208ENST00000512656 VN1R17PQ8TDU5 208 aa5.37□□□□□ -1.55
USP46-208ENST00000512656 ATP6V0BQ99437 205 aa5.37□□□□□ -1.55
USP46-208ENST00000512656 QTRT1Q9BXR0 403 aaKnown RBP5.37□□□□□ -1.55
USP46-208ENST00000512656 PLEKHA2Q9HB19 425 aa5.37□□□□□ -1.55
USP46-208ENST00000512656 CCL28Q9NRJ3 127 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms