RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 HIST1H1BP16401 226 aaKnown RBP12.32□□□□□ -0.44
PDLIM5-216ENST00000511767 PIGPP57054 158 aa12.32□□□□□ -0.44
PDLIM5-216ENST00000511767 SYNJ2BPP57105 145 aa12.32□□□□□ -0.44
PDLIM5-216ENST00000511767 EXOSC2Q13868 293 aaKnown RBP12.32□□□□□ -0.44
PDLIM5-216ENST00000511767 TATDN3Q17R31 274 aa12.32□□□□□ -0.44
PDLIM5-216ENST00000511767 ZFAND1Q8TCF1 268 aa12.32□□□□□ -0.44
PDLIM5-216ENST00000511767 RBM38Q9H0Z9 239 aaKnown RBP12.32□□□□□ -0.44
PDLIM5-216ENST00000511767 RSL24D1Q9UHA3 163 aaKnown RBP12.32□□□□□ -0.44
PDLIM5-216ENST00000511767 OR51B2Q9Y5P1 312 aa12.32□□□□□ -0.44
PDLIM5-216ENST00000511767 SERPINE2P07093 398 aa12.31□□□□□ -0.44
PDLIM5-216ENST00000511767 CSN3P07498 182 aa12.31□□□□□ -0.44
PDLIM5-216ENST00000511767 OR13C7P0DN81 318 aa12.31□□□□□ -0.44
PDLIM5-216ENST00000511767 DEFA4P12838 97 aa12.31□□□□□ -0.44
PDLIM5-216ENST00000511767 SPNP16150 400 aa12.31□□□□□ -0.44
PDLIM5-216ENST00000511767 MECP2P51608 486 aaKnown RBP12.31□□□□□ -0.44
PDLIM5-216ENST00000511767 WT1-ASQ06250 92 aa12.31□□□□□ -0.44
PDLIM5-216ENST00000511767 MEF2DQ14814 521 aa12.31□□□□□ -0.44
PDLIM5-216ENST00000511767 OR9G4Q8NGQ1 327 aa12.31□□□□□ -0.44
PDLIM5-216ENST00000511767 MARCH1Q8TCQ1 289 aa12.31□□□□□ -0.44
PDLIM5-216ENST00000511767 RTBDNQ9BSG5 229 aaPredicted RBP12.31□□□□□ -0.44
PDLIM5-216ENST00000511767 TMEM14BQ9NUH8 114 aa12.31□□□□□ -0.44
PDLIM5-216ENST00000511767 FKBP11Q9NYL4 201 aa12.31□□□□□ -0.44
PDLIM5-216ENST00000511767 PRNDQ9UKY0 176 aa12.31□□□□□ -0.44
PDLIM5-216ENST00000511767 ANKRD20A5PA0PJZ0 165 aa12.3□□□□□ -0.44
PDLIM5-216ENST00000511767 IGLV1-51P01701 117 aa12.3□□□□□ -0.44
PDLIM5-216ENST00000511767 CTSDP07339 412 aaPredicted RBP12.3□□□□□ -0.44
PDLIM5-216ENST00000511767 RPEL1Q2QD12 228 aa12.3□□□□□ -0.44
PDLIM5-216ENST00000511767 SCGB2B2Q4G0G5 96 aa12.3□□□□□ -0.44
PDLIM5-216ENST00000511767 FAM209BQ5JX69 171 aa12.3□□□□□ -0.44
PDLIM5-216ENST00000511767 THOC7Q6I9Y2 204 aaKnown RBP12.3□□□□□ -0.44
PDLIM5-216ENST00000511767 FAAP20Q6NZ36 180 aa12.3□□□□□ -0.44
PDLIM5-216ENST00000511767 HSD17B13Q7Z5P4 300 aaPredicted RBP12.3□□□□□ -0.44
PDLIM5-216ENST00000511767 OR13C8Q8NGS7 320 aa12.3□□□□□ -0.44
PDLIM5-216ENST00000511767 TP53RKQ96S44 253 aa12.3□□□□□ -0.44
PDLIM5-216ENST00000511767 GPR132Q9UNW8 380 aa12.3□□□□□ -0.44
PDLIM5-216ENST00000511767 C3orf85A0A1B0GTC6 90 aa12.29□□□□□ -0.44
PDLIM5-216ENST00000511767 CCDC160A6NGH7 325 aa12.29□□□□□ -0.44
PDLIM5-216ENST00000511767 DISC1C4P0D8 188 aa12.29□□□□□ -0.44
PDLIM5-216ENST00000511767 PPP5D1E7EU14 171 aa12.29□□□□□ -0.44
PDLIM5-216ENST00000511767 ZNF701M0R085 212 aaPredicted RBP12.29□□□□□ -0.44
PDLIM5-216ENST00000511767 OR2C1O95371 312 aa12.29□□□□□ -0.44
PDLIM5-216ENST00000511767 IGHV3-23P01764 117 aa12.29□□□□□ -0.44
PDLIM5-216ENST00000511767 CLEC3BP05452 202 aa12.29□□□□□ -0.44
PDLIM5-216ENST00000511767 AKAIN1P0CW23 69 aa12.29□□□□□ -0.44
PDLIM5-216ENST00000511767 SP6Q3SY56 376 aa12.29□□□□□ -0.44
PDLIM5-216ENST00000511767 H2BFWTQ7Z2G1 175 aa12.29□□□□□ -0.44
PDLIM5-216ENST00000511767 GPHB5Q86YW7 130 aa12.29□□□□□ -0.44
PDLIM5-216ENST00000511767 OR4C16Q8NGL9 310 aa12.29□□□□□ -0.44
PDLIM5-216ENST00000511767 OR6Q1Q8NGQ2 317 aa12.29□□□□□ -0.44
PDLIM5-216ENST00000511767 CCDC140Q96MF4 163 aa12.29□□□□□ -0.44
PDLIM5-216ENST00000511767 TSC22D3Q99576 134 aa12.29□□□□□ -0.44
PDLIM5-216ENST00000511767 THAP7Q9BT49 309 aaPredicted RBP12.29□□□□□ -0.44
PDLIM5-216ENST00000511767 SIGLEC8Q9NYZ4 499 aa12.29□□□□□ -0.44
PDLIM5-216ENST00000511767 S4R3C0 116 aa12.29□□□□□ -0.44
PDLIM5-216ENST00000511767 H0Y980 276 aa12.28□□□□□ -0.44
PDLIM5-216ENST00000511767 GGCTO75223 188 aaKnown RBP12.28□□□□□ -0.44
PDLIM5-216ENST00000511767 IGKV1-5P01602 117 aa12.28□□□□□ -0.44
PDLIM5-216ENST00000511767 HLA-AP01891 365 aaKnown RBP12.28□□□□□ -0.44
PDLIM5-216ENST00000511767 P0C879 139 aa12.28□□□□□ -0.44
PDLIM5-216ENST00000511767 PPP5CP53041 499 aa12.28□□□□□ -0.44
PDLIM5-216ENST00000511767 MFAP2P55001 183 aa12.28□□□□□ -0.44
PDLIM5-216ENST00000511767 HSPE1P61604 102 aaKnown RBP12.28□□□□□ -0.44
PDLIM5-216ENST00000511767 DCTN2Q13561 401 aaKnown RBP12.28□□□□□ -0.44
PDLIM5-216ENST00000511767 SLC25A24Q6NUK1 477 aa12.28□□□□□ -0.44
PDLIM5-216ENST00000511767 CLEC19AQ6UXS0 136 aa12.28□□□□□ -0.44
PDLIM5-216ENST00000511767 ADAMTSL5Q6ZMM2 481 aa12.28□□□□□ -0.44
PDLIM5-216ENST00000511767 GDPD1Q8N9F7 314 aa12.28□□□□□ -0.44
PDLIM5-216ENST00000511767 OR5B3Q8NH48 314 aa12.28□□□□□ -0.44
PDLIM5-216ENST00000511767 OR4A16Q8NH70 328 aa12.28□□□□□ -0.44
PDLIM5-216ENST00000511767 B9D2Q9BPU9 175 aa12.28□□□□□ -0.44
PDLIM5-216ENST00000511767 HINT2Q9BX68 163 aa12.28□□□□□ -0.44
PDLIM5-216ENST00000511767 C5orf66Q9H5L9 145 aa12.28□□□□□ -0.44
PDLIM5-216ENST00000511767 COPZ2Q9P299 210 aa12.28□□□□□ -0.44
PDLIM5-216ENST00000511767 COL7A1Q02388 2944 aa12.27□□□□□ -0.45
PDLIM5-216ENST00000511767 TRBV7-1A0A0A6YYK4 115 aa12.27□□□□□ -0.45
PDLIM5-216ENST00000511767 A0A0B4J293 547 aa12.27□□□□□ -0.45
PDLIM5-216ENST00000511767 MFSD2BA6NFX1 497 aa12.27□□□□□ -0.45
PDLIM5-216ENST00000511767 C15orf61A6NNL5 157 aa12.27□□□□□ -0.45
PDLIM5-216ENST00000511767 LY86O95711 162 aa12.27□□□□□ -0.45
PDLIM5-216ENST00000511767 GP9P14770 177 aa12.27□□□□□ -0.45
PDLIM5-216ENST00000511767 UCP1P25874 307 aa12.27□□□□□ -0.45
PDLIM5-216ENST00000511767 SURF2Q15527 256 aaPredicted RBP12.27□□□□□ -0.45
PDLIM5-216ENST00000511767 IZUMO4Q1ZYL8 232 aa12.27□□□□□ -0.45
PDLIM5-216ENST00000511767 HAPLN4Q86UW8 402 aa12.27□□□□□ -0.45
PDLIM5-216ENST00000511767 Q8N1Y9 231 aa12.27□□□□□ -0.45
PDLIM5-216ENST00000511767 OR51S1Q8NGJ8 323 aa12.27□□□□□ -0.45
PDLIM5-216ENST00000511767 ZNF502Q8TBZ5 544 aa12.27□□□□□ -0.45
PDLIM5-216ENST00000511767 VN1R17PQ8TDU5 208 aa12.27□□□□□ -0.45
PDLIM5-216ENST00000511767 LSM10Q969L4 123 aaKnown RBP12.27□□□□□ -0.45
PDLIM5-216ENST00000511767 EEF1AKMT3Q96AZ1 226 aa12.27□□□□□ -0.45
PDLIM5-216ENST00000511767 CXorf58Q96LI9 332 aa12.27□□□□□ -0.45
PDLIM5-216ENST00000511767 TMEM56Q96MV1 263 aa12.27□□□□□ -0.45
PDLIM5-216ENST00000511767 CDS2O95674 445 aa12.26□□□□□ -0.45
PDLIM5-216ENST00000511767 CCDC71LQ8N9Z2 235 aa12.26□□□□□ -0.45
PDLIM5-216ENST00000511767 GLYATL2Q8WU03 294 aa12.26□□□□□ -0.45
PDLIM5-216ENST00000511767 PRRT1Q99946 306 aa12.26□□□□□ -0.45
PDLIM5-216ENST00000511767 THYN1Q9P016 225 aa12.26□□□□□ -0.45
PDLIM5-216ENST00000511767 F11RQ9Y624 299 aaKnown RBP12.26□□□□□ -0.45
PDLIM5-216ENST00000511767 TEX13DA0A0J9YY54 714 aaPredicted RBP12.25□□□□□ -0.45
PDLIM5-216ENST00000511767 LGALS9O00182 355 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms