RNA–Protein interactions for RNA: ENST00000508659.5

CLDND1-219, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 681 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-219ENST00000508659 CADM3Q8N126 398 aa13.03□□□□□ -0.32
CLDND1-219ENST00000508659 OR1L8Q8NGR8 309 aa13.03□□□□□ -0.32
CLDND1-219ENST00000508659 LSM10Q969L4 123 aaKnown RBP13.03□□□□□ -0.32
CLDND1-219ENST00000508659 SOSTQ9BQB4 213 aa13.03□□□□□ -0.32
CLDND1-219ENST00000508659 HINT2Q9BX68 163 aa13.03□□□□□ -0.32
CLDND1-219ENST00000508659 MCUBQ9NWR8 336 aa13.03□□□□□ -0.32
CLDND1-219ENST00000508659 FBXL7Q9UJT9 491 aa13.03□□□□□ -0.32
CLDND1-219ENST00000508659 NSG2Q9Y328 171 aa13.03□□□□□ -0.32
CLDND1-219ENST00000508659 OR51B2Q9Y5P1 312 aa13.03□□□□□ -0.32
CLDND1-219ENST00000508659 V9GYH0 126 aa13.03□□□□□ -0.32
CLDND1-219ENST00000508659 C3orf85A0A1B0GTC6 90 aa13.02□□□□□ -0.33
CLDND1-219ENST00000508659 K7EIL1 84 aa13.02□□□□□ -0.33
CLDND1-219ENST00000508659 CYB5BO43169 146 aa13.02□□□□□ -0.33
CLDND1-219ENST00000508659 TRAPPC2P0DI81 140 aa13.02□□□□□ -0.33
CLDND1-219ENST00000508659 TRAPPC2BP0DI82 140 aa13.02□□□□□ -0.33
CLDND1-219ENST00000508659 HIST1H1BP16401 226 aaKnown RBP13.02□□□□□ -0.33
CLDND1-219ENST00000508659 TRIM16LQ309B1 348 aa13.02□□□□□ -0.33
CLDND1-219ENST00000508659 ACSM6Q6P461 480 aa13.02□□□□□ -0.33
CLDND1-219ENST00000508659 OR51S1Q8NGJ8 323 aa13.02□□□□□ -0.33
CLDND1-219ENST00000508659 OR5B3Q8NH48 314 aa13.02□□□□□ -0.33
CLDND1-219ENST00000508659 SEC22AQ96IW7 307 aa13.02□□□□□ -0.33
CLDND1-219ENST00000508659 TP53RKQ96S44 253 aa13.02□□□□□ -0.33
CLDND1-219ENST00000508659 ELOVL1Q9BW60 279 aa13.02□□□□□ -0.33
CLDND1-219ENST00000508659 FKBP11Q9NYL4 201 aa13.02□□□□□ -0.33
CLDND1-219ENST00000508659 TNCP24821 2201 aa13.01□□□□□ -0.33
CLDND1-219ENST00000508659 TEX50A0A1B0GTY4 177 aa13.01□□□□□ -0.33
CLDND1-219ENST00000508659 WI2-2373I1.2A0A1W2PRP0 233 aa13.01□□□□□ -0.33
CLDND1-219ENST00000508659 ATG12O94817 140 aa13.01□□□□□ -0.33
CLDND1-219ENST00000508659 IGKV1-39P01597 117 aa13.01□□□□□ -0.33
CLDND1-219ENST00000508659 IGKV1D-39P04432 117 aa13.01□□□□□ -0.33
CLDND1-219ENST00000508659 FAUP35544 74 aaKnown RBP13.01□□□□□ -0.33
CLDND1-219ENST00000508659 AP3S2P59780 193 aa13.01□□□□□ -0.33
CLDND1-219ENST00000508659 GDPD1Q8N9F7 314 aa13.01□□□□□ -0.33
CLDND1-219ENST00000508659 OR10W1Q8NGF6 305 aa13.01□□□□□ -0.33
CLDND1-219ENST00000508659 OR4A16Q8NH70 328 aa13.01□□□□□ -0.33
CLDND1-219ENST00000508659 OR4C12Q96R67 309 aa13.01□□□□□ -0.33
CLDND1-219ENST00000508659 THAP7Q9BT49 309 aaPredicted RBP13.01□□□□□ -0.33
CLDND1-219ENST00000508659 TMEM14BQ9NUH8 114 aa13.01□□□□□ -0.33
CLDND1-219ENST00000508659 SLC2A8Q9NY64 477 aa13.01□□□□□ -0.33
CLDND1-219ENST00000508659 SCP2D1Q9UJQ7 156 aa13.01□□□□□ -0.33
CLDND1-219ENST00000508659 IGLV11-55A0A075B6I3 123 aa13□□□□□ -0.33
CLDND1-219ENST00000508659 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13□□□□□ -0.33
CLDND1-219ENST00000508659 B3GALNT1O75752 331 aa13□□□□□ -0.33
CLDND1-219ENST00000508659 OR13C7P0DN81 318 aa13□□□□□ -0.33
CLDND1-219ENST00000508659 MECP2P51608 486 aaKnown RBP13□□□□□ -0.33
CLDND1-219ENST00000508659 SYNJ2BPP57105 145 aa13□□□□□ -0.33
CLDND1-219ENST00000508659 DCTN2Q13561 401 aaKnown RBP13□□□□□ -0.33
CLDND1-219ENST00000508659 SPANXN2Q5MJ10 180 aa13□□□□□ -0.33
CLDND1-219ENST00000508659 Q8N402 240 aa13□□□□□ -0.33
CLDND1-219ENST00000508659 RNASE11Q8TAA1 199 aaKnown RBP13□□□□□ -0.33
CLDND1-219ENST00000508659 EEF1AKMT3Q96AZ1 226 aa13□□□□□ -0.33
CLDND1-219ENST00000508659 TMEM56Q96MV1 263 aa13□□□□□ -0.33
CLDND1-219ENST00000508659 FANCD2OSQ96PS1 177 aa13□□□□□ -0.33
CLDND1-219ENST00000508659 NDUFA4L2Q9NRX3 87 aa13□□□□□ -0.33
CLDND1-219ENST00000508659 THYN1Q9P016 225 aa13□□□□□ -0.33
CLDND1-219ENST00000508659 ZNF256Q9Y2P7 627 aaPredicted RBP13□□□□□ -0.33
CLDND1-219ENST00000508659 TEX13DA0A0J9YY54 714 aaPredicted RBP12.99□□□□□ -0.33
CLDND1-219ENST00000508659 BMPR1BO00238 502 aa12.99□□□□□ -0.33
CLDND1-219ENST00000508659 NDUFB8O95169 186 aa12.99□□□□□ -0.33
CLDND1-219ENST00000508659 LY86O95711 162 aa12.99□□□□□ -0.33
CLDND1-219ENST00000508659 WT1-ASQ06250 92 aa12.99□□□□□ -0.33
CLDND1-219ENST00000508659 TATDN3Q17R31 274 aa12.99□□□□□ -0.33
CLDND1-219ENST00000508659 CCDC190Q86UF4 302 aa12.99□□□□□ -0.33
CLDND1-219ENST00000508659 TOMM5Q8N4H5 51 aa12.99□□□□□ -0.33
CLDND1-219ENST00000508659 OR9G4Q8NGQ1 327 aa12.99□□□□□ -0.33
CLDND1-219ENST00000508659 OR6Q1Q8NGQ2 317 aa12.99□□□□□ -0.33
CLDND1-219ENST00000508659 TRIM63Q969Q1 353 aa12.99□□□□□ -0.33
CLDND1-219ENST00000508659 CXorf58Q96LI9 332 aa12.99□□□□□ -0.33
CLDND1-219ENST00000508659 C5orf66Q9H5L9 145 aa12.99□□□□□ -0.33
CLDND1-219ENST00000508659 NAA60Q9H7X0 242 aa12.99□□□□□ -0.33
CLDND1-219ENST00000508659 DBX1A6NMT0 343 aa12.98□□□□□ -0.33
CLDND1-219ENST00000508659 IGHV3-23P01764 117 aa12.98□□□□□ -0.33
CLDND1-219ENST00000508659 OR5AC1P0C628 307 aa12.98□□□□□ -0.33
CLDND1-219ENST00000508659 UCP1P25874 307 aa12.98□□□□□ -0.33
CLDND1-219ENST00000508659 KLF5Q13887 457 aaPredicted RBP12.98□□□□□ -0.33
CLDND1-219ENST00000508659 ZNF79Q15937 498 aa12.98□□□□□ -0.33
CLDND1-219ENST00000508659 KLK9Q2XQG4 91 aa12.98□□□□□ -0.33
CLDND1-219ENST00000508659 SP6Q3SY56 376 aa12.98□□□□□ -0.33
CLDND1-219ENST00000508659 DEFB121Q5J5C9 76 aa12.98□□□□□ -0.33
CLDND1-219ENST00000508659 CCDC140Q96MF4 163 aa12.98□□□□□ -0.33
CLDND1-219ENST00000508659 PRR25Q96S07 402 aa12.98□□□□□ -0.33
CLDND1-219ENST00000508659 NDUFA13Q9P0J0 144 aa12.98□□□□□ -0.33
CLDND1-219ENST00000508659 PEMTQ9UBM1 199 aa12.98□□□□□ -0.33
CLDND1-219ENST00000508659 KLK9Q9UKQ9 250 aa12.98□□□□□ -0.33
CLDND1-219ENST00000508659 S4R3C0 116 aa12.98□□□□□ -0.33
CLDND1-219ENST00000508659 MFSD2BA6NFX1 497 aa12.97□□□□□ -0.33
CLDND1-219ENST00000508659 PPP5D1E7EU14 171 aa12.97□□□□□ -0.33
CLDND1-219ENST00000508659 IGKV1-5P01602 117 aa12.97□□□□□ -0.33
CLDND1-219ENST00000508659 ARL3P36405 182 aa12.97□□□□□ -0.33
CLDND1-219ENST00000508659 KLF9Q13886 244 aaPredicted RBP12.97□□□□□ -0.33
CLDND1-219ENST00000508659 RRNAD1Q96FB5 475 aaKnown RBP12.97□□□□□ -0.33
CLDND1-219ENST00000508659 SCGB3A2Q96PL1 93 aa12.97□□□□□ -0.33
CLDND1-219ENST00000508659 RTBDNQ9BSG5 229 aaPredicted RBP12.97□□□□□ -0.33
CLDND1-219ENST00000508659 PDCD10Q9BUL8 212 aa12.97□□□□□ -0.33
CLDND1-219ENST00000508659 TMEM222Q9H0R3 208 aa12.97□□□□□ -0.33
CLDND1-219ENST00000508659 F11RQ9Y624 299 aaKnown RBP12.97□□□□□ -0.33
CLDND1-219ENST00000508659 TRBV7-1A0A0A6YYK4 115 aa12.96□□□□□ -0.33
CLDND1-219ENST00000508659 CRYM-AS1A6NIL9 109 aa12.96□□□□□ -0.33
CLDND1-219ENST00000508659 GGCTO75223 188 aaKnown RBP12.96□□□□□ -0.33
CLDND1-219ENST00000508659 ETV6P41212 452 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms