RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 RPA2P15927 270 aa9.75□□□□□ -0.85
HMGCS1-205ENST00000508319 NAT1P18440 290 aa9.75□□□□□ -0.85
HMGCS1-205ENST00000508319 TAS2R20P59543 309 aa9.75□□□□□ -0.85
HMGCS1-205ENST00000508319 WT1-ASQ06250 92 aa9.75□□□□□ -0.85
HMGCS1-205ENST00000508319 TM4SF20Q53R12 229 aa9.75□□□□□ -0.85
HMGCS1-205ENST00000508319 TMEM69Q5SWH9 247 aa9.75□□□□□ -0.85
HMGCS1-205ENST00000508319 THOC7Q6I9Y2 204 aaKnown RBP9.75□□□□□ -0.85
HMGCS1-205ENST00000508319 DHRS11Q6UWP2 260 aa9.75□□□□□ -0.85
HMGCS1-205ENST00000508319 BTNL8Q6UX41 500 aa9.75□□□□□ -0.85
HMGCS1-205ENST00000508319 SLC16A13Q7RTY0 426 aa9.75□□□□□ -0.85
HMGCS1-205ENST00000508319 CROCCP3Q8IVE0 287 aa9.75□□□□□ -0.85
HMGCS1-205ENST00000508319 SAMD12Q8N8I0 201 aa9.75□□□□□ -0.85
HMGCS1-205ENST00000508319 GDPD1Q8N9F7 314 aa9.75□□□□□ -0.85
HMGCS1-205ENST00000508319 UXS1Q8NBZ7 420 aa9.75□□□□□ -0.85
HMGCS1-205ENST00000508319 BORCS5Q969J3 196 aa9.75□□□□□ -0.85
HMGCS1-205ENST00000508319 YIPF6Q96EC8 236 aa9.75□□□□□ -0.85
HMGCS1-205ENST00000508319 ZNF2Q9BSG1 426 aaPredicted RBP9.75□□□□□ -0.85
HMGCS1-205ENST00000508319 ALMS1Q8TCU4 4167 aa9.75□□□□□ -0.85
HMGCS1-205ENST00000508319 PGLYRP1O75594 196 aaPredicted RBP9.74□□□□□ -0.85
HMGCS1-205ENST00000508319 SCAF4O95104 1147 aaKnown RBP9.74□□□□□ -0.85
HMGCS1-205ENST00000508319 PMP2P02689 132 aa9.74□□□□□ -0.85
HMGCS1-205ENST00000508319 C8orf88P0DMB2 117 aa9.74□□□□□ -0.85
HMGCS1-205ENST00000508319 F2RP25116 425 aa9.74□□□□□ -0.85
HMGCS1-205ENST00000508319 PTBP1P26599 531 aaKnown RBP eCLIP9.74□□□□□ -0.85
HMGCS1-205ENST00000508319 LSM3P62310 102 aaKnown RBP9.74□□□□□ -0.85
HMGCS1-205ENST00000508319 TMEM190Q8WZ59 177 aa9.74□□□□□ -0.85
HMGCS1-205ENST00000508319 PLECQ15149 4684 aaKnown RBP9.74□□□□□ -0.85
HMGCS1-205ENST00000508319 IGHV3-35A0A0C4DH35 117 aa9.73□□□□□ -0.85
HMGCS1-205ENST00000508319 TEX50A0A1B0GTY4 177 aa9.73□□□□□ -0.85
HMGCS1-205ENST00000508319 TGOLN2O43493 480 aa9.73□□□□□ -0.85
HMGCS1-205ENST00000508319 EIF4EP06730 217 aaKnown RBP9.73□□□□□ -0.85
HMGCS1-205ENST00000508319 SERPINE2P07093 398 aa9.73□□□□□ -0.85
HMGCS1-205ENST00000508319 TRAPPC2P0DI81 140 aa9.73□□□□□ -0.85
HMGCS1-205ENST00000508319 TRAPPC2BP0DI82 140 aa9.73□□□□□ -0.85
HMGCS1-205ENST00000508319 OR13C7P0DN81 318 aa9.73□□□□□ -0.85
HMGCS1-205ENST00000508319 MFAP2P55001 183 aa9.73□□□□□ -0.85
HMGCS1-205ENST00000508319 TAS2R46P59540 309 aa9.73□□□□□ -0.85
HMGCS1-205ENST00000508319 ERVK-16P61578 105 aa9.73□□□□□ -0.85
HMGCS1-205ENST00000508319 ZNF585BQ52M93 769 aa9.73□□□□□ -0.85
HMGCS1-205ENST00000508319 PLET1Q6UQ28 207 aa9.73□□□□□ -0.85
HMGCS1-205ENST00000508319 OR52B4Q8NGK2 314 aa9.73□□□□□ -0.85
HMGCS1-205ENST00000508319 OR5H2Q8NGV7 314 aa9.73□□□□□ -0.85
HMGCS1-205ENST00000508319 VN1R17PQ8TDU5 208 aa9.73□□□□□ -0.85
HMGCS1-205ENST00000508319 FCAMRQ8WWV6 532 aa9.73□□□□□ -0.85
HMGCS1-205ENST00000508319 MARC2Q969Z3 335 aa9.73□□□□□ -0.85
HMGCS1-205ENST00000508319 DGCR14Q96DF8 476 aaKnown RBP9.73□□□□□ -0.85
HMGCS1-205ENST00000508319 ZNF436Q9C0F3 470 aaPredicted RBP9.73□□□□□ -0.85
HMGCS1-205ENST00000508319 NDUFA4L2Q9NRX3 87 aa9.73□□□□□ -0.85
HMGCS1-205ENST00000508319 THYN1Q9P016 225 aa9.73□□□□□ -0.85
HMGCS1-205ENST00000508319 OR2T8A6NH00 312 aa9.72□□□□□ -0.85
HMGCS1-205ENST00000508319 GPR31O00270 319 aa9.72□□□□□ -0.85
HMGCS1-205ENST00000508319 KRASP01116 189 aa9.72□□□□□ -0.85
HMGCS1-205ENST00000508319 PRSS3P35030 304 aa9.72□□□□□ -0.85
HMGCS1-205ENST00000508319 HRH1P35367 487 aa9.72□□□□□ -0.85
HMGCS1-205ENST00000508319 G6PCP35575 357 aa9.72□□□□□ -0.85
HMGCS1-205ENST00000508319 ELLP55199 621 aaPredicted RBP9.72□□□□□ -0.85
HMGCS1-205ENST00000508319 HSD17B13Q7Z5P4 300 aaPredicted RBP9.72□□□□□ -0.85
HMGCS1-205ENST00000508319 LYSMD2Q8IV50 215 aa9.72□□□□□ -0.85
HMGCS1-205ENST00000508319 CADM3Q8N126 398 aa9.72□□□□□ -0.85
HMGCS1-205ENST00000508319 OR1L8Q8NGR8 309 aa9.72□□□□□ -0.85
HMGCS1-205ENST00000508319 LSM10Q969L4 123 aaKnown RBP9.72□□□□□ -0.85
HMGCS1-205ENST00000508319 SLC25A46Q96AG3 418 aa9.72□□□□□ -0.85
HMGCS1-205ENST00000508319 NSG2Q9Y328 171 aa9.72□□□□□ -0.85
HMGCS1-205ENST00000508319 UFC1Q9Y3C8 167 aa9.72□□□□□ -0.85
HMGCS1-205ENST00000508319 F11RQ9Y624 299 aaKnown RBP9.72□□□□□ -0.85
HMGCS1-205ENST00000508319 A0A087WXM4 84 aa9.71□□□□□ -0.86
HMGCS1-205ENST00000508319 TRAV25A0A0B4J276 109 aa9.71□□□□□ -0.86
HMGCS1-205ENST00000508319 F8W735 103 aaPredicted RBP9.71□□□□□ -0.86
HMGCS1-205ENST00000508319 CYB5BO43169 146 aa9.71□□□□□ -0.86
HMGCS1-205ENST00000508319 HLA-DMAP28067 261 aa9.71□□□□□ -0.86
HMGCS1-205ENST00000508319 LPAR6P43657 344 aa9.71□□□□□ -0.86
HMGCS1-205ENST00000508319 CMTM1Q8IZ96 169 aa9.71□□□□□ -0.86
HMGCS1-205ENST00000508319 TSPAN14Q8NG11 270 aa9.71□□□□□ -0.86
HMGCS1-205ENST00000508319 OR6F1Q8NGZ6 308 aa9.71□□□□□ -0.86
HMGCS1-205ENST00000508319 GPX8Q8TED1 209 aa9.71□□□□□ -0.86
HMGCS1-205ENST00000508319 BSCL2Q96G97 398 aaPredicted RBP9.71□□□□□ -0.86
HMGCS1-205ENST00000508319 VCX3AQ9NNX9 186 aa9.71□□□□□ -0.86
HMGCS1-205ENST00000508319 MRPL27Q9P0M9 148 aaKnown RBP9.71□□□□□ -0.86
HMGCS1-205ENST00000508319 OR51B2Q9Y5P1 312 aa9.71□□□□□ -0.86
HMGCS1-205ENST00000508319 IGHV3-21A0A0B4J1V1 117 aa9.7□□□□□ -0.86
HMGCS1-205ENST00000508319 DBX1A6NMT0 343 aa9.7□□□□□ -0.86
HMGCS1-205ENST00000508319 K7EIM0 57 aa9.7□□□□□ -0.86
HMGCS1-205ENST00000508319 TNFAIP8O95379 198 aa9.7□□□□□ -0.86
HMGCS1-205ENST00000508319 NCS1P62166 190 aa9.7□□□□□ -0.86
HMGCS1-205ENST00000508319 ANKRD55Q3KP44 614 aa9.7□□□□□ -0.86
HMGCS1-205ENST00000508319 PHLDA2Q53GA4 152 aa9.7□□□□□ -0.86
HMGCS1-205ENST00000508319 SLC25A24Q6NUK1 477 aa9.7□□□□□ -0.86
HMGCS1-205ENST00000508319 OR1L6Q8NGR2 347 aa9.7□□□□□ -0.86
HMGCS1-205ENST00000508319 CHRDL1Q9BU40 450 aa9.7□□□□□ -0.86
HMGCS1-205ENST00000508319 GGTLC1Q9BX51 225 aa9.7□□□□□ -0.86
HMGCS1-205ENST00000508319 HINT2Q9BX68 163 aa9.7□□□□□ -0.86
HMGCS1-205ENST00000508319 C5orf66Q9H5L9 145 aa9.7□□□□□ -0.86
HMGCS1-205ENST00000508319 DAZ1Q9NQZ3 744 aaKnown RBP9.7□□□□□ -0.86
HMGCS1-205ENST00000508319 TMEM14BQ9NUH8 114 aa9.7□□□□□ -0.86
HMGCS1-205ENST00000508319 C21orf62Q9NYP8 219 aa9.7□□□□□ -0.86
HMGCS1-205ENST00000508319 LOC102724200A0A096LPH7 203 aaPredicted RBP9.69□□□□□ -0.86
HMGCS1-205ENST00000508319 C15orf61A6NNL5 157 aa9.69□□□□□ -0.86
HMGCS1-205ENST00000508319 APOA1P02647 267 aa9.69□□□□□ -0.86
HMGCS1-205ENST00000508319 ADMP35318 185 aa9.69□□□□□ -0.86
HMGCS1-205ENST00000508319 SPSB3Q6PJ21 355 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms