RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 COMMD5Q9GZQ3 224 aa6.87□□□□□ -1.31
PDLIM5-209ENST00000506632 FAM212BQ9NTI7 297 aaPredicted RBP6.87□□□□□ -1.31
PDLIM5-209ENST00000506632 KMT2CQ8NEZ4 4911 aaKnown RBP6.87□□□□□ -1.31
PDLIM5-209ENST00000506632 ELOA3CA0A087WX78 387 aaPredicted RBP6.86□□□□□ -1.31
PDLIM5-209ENST00000506632 TRBV7-1A0A0A6YYK4 115 aa6.86□□□□□ -1.31
PDLIM5-209ENST00000506632 TEX50A0A1B0GTY4 177 aa6.86□□□□□ -1.31
PDLIM5-209ENST00000506632 C2orf70A6NJV1 201 aa6.86□□□□□ -1.31
PDLIM5-209ENST00000506632 ZNF785A8K8V0 405 aa6.86□□□□□ -1.31
PDLIM5-209ENST00000506632 A8MWP6 167 aa6.86□□□□□ -1.31
PDLIM5-209ENST00000506632 TPPPO94811 219 aa6.86□□□□□ -1.31
PDLIM5-209ENST00000506632 OR2C1O95371 312 aa6.86□□□□□ -1.31
PDLIM5-209ENST00000506632 IGHV3-23P01764 117 aa6.86□□□□□ -1.31
PDLIM5-209ENST00000506632 HLA-AP01891 365 aaKnown RBP6.86□□□□□ -1.31
PDLIM5-209ENST00000506632 ARL3P36405 182 aa6.86□□□□□ -1.31
PDLIM5-209ENST00000506632 LPAR6P43657 344 aa6.86□□□□□ -1.31
PDLIM5-209ENST00000506632 ALDH3B2P48448 385 aa6.86□□□□□ -1.31
PDLIM5-209ENST00000506632 ID3Q02535 119 aa6.86□□□□□ -1.31
PDLIM5-209ENST00000506632 WT1-ASQ06250 92 aa6.86□□□□□ -1.31
PDLIM5-209ENST00000506632 LPCAT3Q6P1A2 487 aa6.86□□□□□ -1.31
PDLIM5-209ENST00000506632 MZT2AQ6P582 158 aa6.86□□□□□ -1.31
PDLIM5-209ENST00000506632 CLEC19AQ6UXS0 136 aa6.86□□□□□ -1.31
PDLIM5-209ENST00000506632 LAX1Q8IWV1 398 aa6.86□□□□□ -1.31
PDLIM5-209ENST00000506632 SGPP2Q8IWX5 399 aa6.86□□□□□ -1.31
PDLIM5-209ENST00000506632 GDPD1Q8N9F7 314 aa6.86□□□□□ -1.31
PDLIM5-209ENST00000506632 OR10W1Q8NGF6 305 aa6.86□□□□□ -1.31
PDLIM5-209ENST00000506632 SVIPQ8NHG7 77 aa6.86□□□□□ -1.31
PDLIM5-209ENST00000506632 EEF1AKMT3Q96AZ1 226 aa6.86□□□□□ -1.31
PDLIM5-209ENST00000506632 ZC4H2Q9NQZ6 224 aa6.86□□□□□ -1.31
PDLIM5-209ENST00000506632 NDUFA4L2Q9NRX3 87 aa6.86□□□□□ -1.31
PDLIM5-209ENST00000506632 S4R3C0 116 aa6.86□□□□□ -1.31
PDLIM5-209ENST00000506632 DNAH7Q8WXX0 4024 aa6.85□□□□□ -1.31
PDLIM5-209ENST00000506632 TMEM213A2RRL7 107 aa6.85□□□□□ -1.31
PDLIM5-209ENST00000506632 KRASP01116 189 aa6.85□□□□□ -1.31
PDLIM5-209ENST00000506632 IGKV1-39P01597 117 aa6.85□□□□□ -1.31
PDLIM5-209ENST00000506632 IGKV1D-39P04432 117 aa6.85□□□□□ -1.31
PDLIM5-209ENST00000506632 SERPINE2P07093 398 aa6.85□□□□□ -1.31
PDLIM5-209ENST00000506632 TRAPPC2P0DI81 140 aa6.85□□□□□ -1.31
PDLIM5-209ENST00000506632 TRAPPC2BP0DI82 140 aa6.85□□□□□ -1.31
PDLIM5-209ENST00000506632 DEFA4P12838 97 aa6.85□□□□□ -1.31
PDLIM5-209ENST00000506632 FOLR2P14207 255 aa6.85□□□□□ -1.31
PDLIM5-209ENST00000506632 RPA2P15927 270 aa6.85□□□□□ -1.31
PDLIM5-209ENST00000506632 ZNF182P17025 639 aaPredicted RBP6.85□□□□□ -1.31
PDLIM5-209ENST00000506632 EDN2P20800 178 aa6.85□□□□□ -1.31
PDLIM5-209ENST00000506632 PTBP1P26599 531 aaKnown RBP eCLIP6.85□□□□□ -1.311e-7■■□□□ 13
PDLIM5-209ENST00000506632 G6PCP35575 357 aa6.85□□□□□ -1.31
PDLIM5-209ENST00000506632 ERVK-16P61578 105 aa6.85□□□□□ -1.31
PDLIM5-209ENST00000506632 TSPAN5P62079 268 aa6.85□□□□□ -1.31
PDLIM5-209ENST00000506632 DEFB114Q30KQ6 69 aa6.85□□□□□ -1.31
PDLIM5-209ENST00000506632 CD300EQ496F6 205 aaPredicted RBP6.85□□□□□ -1.31
PDLIM5-209ENST00000506632 PHLDA2Q53GA4 152 aa6.85□□□□□ -1.31
PDLIM5-209ENST00000506632 GPR107Q5VW38 600 aa6.85□□□□□ -1.31
PDLIM5-209ENST00000506632 HSD17B13Q7Z5P4 300 aaPredicted RBP6.85□□□□□ -1.31
PDLIM5-209ENST00000506632 LHFPL1Q86WI0 220 aa6.85□□□□□ -1.31
PDLIM5-209ENST00000506632 OR1L8Q8NGR8 309 aa6.85□□□□□ -1.31
PDLIM5-209ENST00000506632 ZNF502Q8TBZ5 544 aa6.85□□□□□ -1.31
PDLIM5-209ENST00000506632 AP3S1Q92572 193 aa6.85□□□□□ -1.31
PDLIM5-209ENST00000506632 CXorf58Q96LI9 332 aa6.85□□□□□ -1.31
PDLIM5-209ENST00000506632 ARPC5LQ9BPX5 153 aa6.85□□□□□ -1.31
PDLIM5-209ENST00000506632 MRPS26Q9BYN8 205 aaKnown RBP6.85□□□□□ -1.31
PDLIM5-209ENST00000506632 TMEM14BQ9NUH8 114 aa6.85□□□□□ -1.31
PDLIM5-209ENST00000506632 C15orf61A6NNL5 157 aa6.84□□□□□ -1.31
PDLIM5-209ENST00000506632 FAM25AB3EWG3 89 aa6.84□□□□□ -1.31
PDLIM5-209ENST00000506632 FAM25CB3EWG5 89 aa6.84□□□□□ -1.31
PDLIM5-209ENST00000506632 FAM25GB3EWG6 89 aa6.84□□□□□ -1.31
PDLIM5-209ENST00000506632 C3orf84H3BNL1 204 aa6.84□□□□□ -1.31
PDLIM5-209ENST00000506632 M0QYG6 137 aa6.84□□□□□ -1.31
PDLIM5-209ENST00000506632 CLEC3BP05452 202 aa6.84□□□□□ -1.31
PDLIM5-209ENST00000506632 OR13C7P0DN81 318 aa6.84□□□□□ -1.31
PDLIM5-209ENST00000506632 CBLN1P23435 193 aa6.84□□□□□ -1.31
PDLIM5-209ENST00000506632 MFAP2P55001 183 aa6.84□□□□□ -1.31
PDLIM5-209ENST00000506632 RND3P61587 244 aa6.84□□□□□ -1.31
PDLIM5-209ENST00000506632 LINC00322Q6ZN03 302 aaPredicted RBP6.84□□□□□ -1.31
PDLIM5-209ENST00000506632 TBC1D26Q86UD7 250 aa6.84□□□□□ -1.31
PDLIM5-209ENST00000506632 GTSCR1Q86UQ5 136 aa6.84□□□□□ -1.31
PDLIM5-209ENST00000506632 SLC38A6Q8IZM9 456 aa6.84□□□□□ -1.31
PDLIM5-209ENST00000506632 OR5B3Q8NH48 314 aa6.84□□□□□ -1.31
PDLIM5-209ENST00000506632 OR52I2Q8NH67 350 aa6.84□□□□□ -1.31
PDLIM5-209ENST00000506632 VN1R17PQ8TDU5 208 aa6.84□□□□□ -1.31
PDLIM5-209ENST00000506632 LSM10Q969L4 123 aaKnown RBP6.84□□□□□ -1.31
PDLIM5-209ENST00000506632 SEC22AQ96IW7 307 aa6.84□□□□□ -1.31
PDLIM5-209ENST00000506632 ABHD1Q96SE0 405 aa6.84□□□□□ -1.31
PDLIM5-209ENST00000506632 ZNF436Q9C0F3 470 aaPredicted RBP6.84□□□□□ -1.31
PDLIM5-209ENST00000506632 MIXL1Q9H2W2 232 aa6.84□□□□□ -1.31
PDLIM5-209ENST00000506632 ZMAT4Q9H898 229 aa6.84□□□□□ -1.31
PDLIM5-209ENST00000506632 TECRQ9NZ01 308 aaKnown RBP6.84□□□□□ -1.31
PDLIM5-209ENST00000506632 THYN1Q9P016 225 aa6.84□□□□□ -1.31
PDLIM5-209ENST00000506632 KLK11Q9UBX7 282 aa6.84□□□□□ -1.31
PDLIM5-209ENST00000506632 MTFP1Q9UDX5 166 aa6.84□□□□□ -1.31
PDLIM5-209ENST00000506632 PRNDQ9UKY0 176 aa6.84□□□□□ -1.31
PDLIM5-209ENST00000506632 NSG2Q9Y328 171 aa6.84□□□□□ -1.31
PDLIM5-209ENST00000506632 F11RQ9Y624 299 aaKnown RBP6.84□□□□□ -1.31
PDLIM5-209ENST00000506632 DBX1A6NMT0 343 aa6.83□□□□□ -1.32
PDLIM5-209ENST00000506632 CD74P04233 296 aa6.83□□□□□ -1.32
PDLIM5-209ENST00000506632 CD3DP04234 171 aa6.83□□□□□ -1.32
PDLIM5-209ENST00000506632 CD7P09564 240 aa6.83□□□□□ -1.32
PDLIM5-209ENST00000506632 C8orf88P0DMB2 117 aa6.83□□□□□ -1.32
PDLIM5-209ENST00000506632 TBPP20226 339 aa6.83□□□□□ -1.32
PDLIM5-209ENST00000506632 S100GP29377 79 aa6.83□□□□□ -1.32
PDLIM5-209ENST00000506632 GPR183P32249 361 aa6.83□□□□□ -1.32
PDLIM5-209ENST00000506632 SPCS2Q15005 226 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms