RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 SLC2A8Q9NY64 477 aa10.11□□□□□ -0.79
TCOF1-209ENST00000506630 SORL1Q92673 2214 aa10.1□□□□□ -0.79
TCOF1-209ENST00000506630 FAM223BA6NKX1 122 aa10.1□□□□□ -0.79
TCOF1-209ENST00000506630 C15orf61A6NNL5 157 aa10.1□□□□□ -0.79
TCOF1-209ENST00000506630 SEC14L6B5MCN3 397 aa10.1□□□□□ -0.79
TCOF1-209ENST00000506630 RBMXL2O75526 392 aaKnown RBP10.1□□□□□ -0.79
TCOF1-209ENST00000506630 DHFRP00374 187 aa10.1□□□□□ -0.79
TCOF1-209ENST00000506630 IGKV1-39P01597 117 aa10.1□□□□□ -0.79
TCOF1-209ENST00000506630 IGKV1D-39P04432 117 aa10.1□□□□□ -0.79
TCOF1-209ENST00000506630 FGF2P09038 288 aa10.1□□□□□ -0.79
TCOF1-209ENST00000506630 DEFA4P12838 97 aa10.1□□□□□ -0.79
TCOF1-209ENST00000506630 AKR1C2P52895 323 aa10.1□□□□□ -0.79
TCOF1-209ENST00000506630 EXOSC2Q13868 293 aaKnown RBP10.1□□□□□ -0.79
TCOF1-209ENST00000506630 KLF9Q13886 244 aaPredicted RBP10.1□□□□□ -0.79
TCOF1-209ENST00000506630 C9orf66Q5T8R8 295 aa10.1□□□□□ -0.79
TCOF1-209ENST00000506630 FAM223AQ8IWN6 122 aa10.1□□□□□ -0.79
TCOF1-209ENST00000506630 OR1L8Q8NGR8 309 aa10.1□□□□□ -0.79
TCOF1-209ENST00000506630 DCUN1D4Q92564 292 aa10.1□□□□□ -0.79
TCOF1-209ENST00000506630 SEC22AQ96IW7 307 aa10.1□□□□□ -0.79
TCOF1-209ENST00000506630 C5orf66Q9H5L9 145 aa10.1□□□□□ -0.79
TCOF1-209ENST00000506630 PRNDQ9UKY0 176 aa10.1□□□□□ -0.79
TCOF1-209ENST00000506630 OR51B2Q9Y5P1 312 aa10.1□□□□□ -0.79
TCOF1-209ENST00000506630 TRBV9A0A0B4J1U6 114 aa10.09□□□□□ -0.79
TCOF1-209ENST00000506630 TEX13DA0A0J9YY54 714 aaPredicted RBP10.09□□□□□ -0.79
TCOF1-209ENST00000506630 TEX50A0A1B0GTY4 177 aa10.09□□□□□ -0.79
TCOF1-209ENST00000506630 IGLC7A0M8Q6 106 aa10.09□□□□□ -0.79
TCOF1-209ENST00000506630 OVOL1O14753 267 aa10.09□□□□□ -0.79
TCOF1-209ENST00000506630 CRYGCP07315 174 aa10.09□□□□□ -0.79
TCOF1-209ENST00000506630 TRAPPC2P0DI81 140 aa10.09□□□□□ -0.79
TCOF1-209ENST00000506630 TRAPPC2BP0DI82 140 aa10.09□□□□□ -0.79
TCOF1-209ENST00000506630 CTRB1P17538 263 aa10.09□□□□□ -0.79
TCOF1-209ENST00000506630 ETV6P41212 452 aa10.09□□□□□ -0.79
TCOF1-209ENST00000506630 MECP2P51608 486 aaKnown RBP10.09□□□□□ -0.79
TCOF1-209ENST00000506630 ATP5G2Q06055 141 aa10.09□□□□□ -0.79
TCOF1-209ENST00000506630 EGFEM1PQ0D2K5 195 aa10.09□□□□□ -0.79
TCOF1-209ENST00000506630 C15orf32Q32M92 178 aa10.09□□□□□ -0.79
TCOF1-209ENST00000506630 SP6Q3SY56 376 aa10.09□□□□□ -0.79
TCOF1-209ENST00000506630 ZNF57Q68EA5 555 aaPredicted RBP10.09□□□□□ -0.79
TCOF1-209ENST00000506630 CTRB2Q6GPI1 263 aa10.09□□□□□ -0.79
TCOF1-209ENST00000506630 THOC7Q6I9Y2 204 aaKnown RBP10.09□□□□□ -0.79
TCOF1-209ENST00000506630 ZNF343Q6P1L6 599 aa10.09□□□□□ -0.79
TCOF1-209ENST00000506630 CADM3Q8N126 398 aa10.09□□□□□ -0.79
TCOF1-209ENST00000506630 NECAP1Q8NC96 275 aa10.09□□□□□ -0.79
TCOF1-209ENST00000506630 OR10W1Q8NGF6 305 aa10.09□□□□□ -0.79
TCOF1-209ENST00000506630 OR4A16Q8NH70 328 aa10.09□□□□□ -0.79
TCOF1-209ENST00000506630 RNASE11Q8TAA1 199 aaKnown RBP10.09□□□□□ -0.79
TCOF1-209ENST00000506630 DLX4Q92988 240 aaPredicted RBP10.09□□□□□ -0.79
TCOF1-209ENST00000506630 SCGB3A2Q96PL1 93 aa10.09□□□□□ -0.79
TCOF1-209ENST00000506630 SRSF8Q9BRL6 282 aaKnown RBP10.09□□□□□ -0.79
TCOF1-209ENST00000506630 RTBDNQ9BSG5 229 aaPredicted RBP10.09□□□□□ -0.79
TCOF1-209ENST00000506630 SRRQ9GZT4 340 aa10.09□□□□□ -0.79
TCOF1-209ENST00000506630 NAA60Q9H7X0 242 aa10.09□□□□□ -0.79
TCOF1-209ENST00000506630 RANGRFQ9HD47 186 aaPredicted RBP10.09□□□□□ -0.79
TCOF1-209ENST00000506630 PEF1Q9UBV8 284 aaKnown RBP10.09□□□□□ -0.79
TCOF1-209ENST00000506630 GPR132Q9UNW8 380 aa10.09□□□□□ -0.79
TCOF1-209ENST00000506630 RYR3Q15413 4870 aa10.08□□□□□ -0.8
TCOF1-209ENST00000506630 ATG12O94817 140 aa10.08□□□□□ -0.8
TCOF1-209ENST00000506630 TRBV12-3P01733 135 aa10.08□□□□□ -0.8
TCOF1-209ENST00000506630 OR5AC1P0C628 307 aa10.08□□□□□ -0.8
TCOF1-209ENST00000506630 NHLRC4P0CG21 123 aaPredicted RBP10.08□□□□□ -0.8
TCOF1-209ENST00000506630 ZP3P21754 424 aa10.08□□□□□ -0.8
TCOF1-209ENST00000506630 UCP1P25874 307 aa10.08□□□□□ -0.8
TCOF1-209ENST00000506630 INPP1P49441 399 aa10.08□□□□□ -0.8
TCOF1-209ENST00000506630 TRIQKQ629K1 86 aa10.08□□□□□ -0.8
TCOF1-209ENST00000506630 GDPD1Q8N9F7 314 aa10.08□□□□□ -0.8
TCOF1-209ENST00000506630 LSM10Q969L4 123 aaKnown RBP10.08□□□□□ -0.8
TCOF1-209ENST00000506630 FANCD2OSQ96PS1 177 aa10.08□□□□□ -0.8
TCOF1-209ENST00000506630 KRTAP3-3Q9BYR6 98 aa10.08□□□□□ -0.8
TCOF1-209ENST00000506630 KRTAP3-2Q9BYR7 98 aa10.08□□□□□ -0.8
TCOF1-209ENST00000506630 NDUFA4L2Q9NRX3 87 aa10.08□□□□□ -0.8
TCOF1-209ENST00000506630 FKBP11Q9NYL4 201 aa10.08□□□□□ -0.8
TCOF1-209ENST00000506630 FBXL7Q9UJT9 491 aa10.08□□□□□ -0.8
TCOF1-209ENST00000506630 COL7A1Q02388 2944 aa10.07□□□□□ -0.8
TCOF1-209ENST00000506630 CRYM-AS1A6NIL9 109 aa10.07□□□□□ -0.8
TCOF1-209ENST00000506630 DBX1A6NMT0 343 aa10.07□□□□□ -0.8
TCOF1-209ENST00000506630 SAP30O75446 220 aa10.07□□□□□ -0.8
TCOF1-209ENST00000506630 B3GALNT1O75752 331 aa10.07□□□□□ -0.8
TCOF1-209ENST00000506630 IGKV1-5P01602 117 aa10.07□□□□□ -0.8
TCOF1-209ENST00000506630 OR13C7P0DN81 318 aa10.07□□□□□ -0.8
TCOF1-209ENST00000506630 HIST1H1BP16401 226 aaKnown RBP10.07□□□□□ -0.8
TCOF1-209ENST00000506630 IZUMO4Q1ZYL8 232 aa10.07□□□□□ -0.8
TCOF1-209ENST00000506630 HSD17B13Q7Z5P4 300 aaPredicted RBP10.07□□□□□ -0.8
TCOF1-209ENST00000506630 OR5B3Q8NH48 314 aa10.07□□□□□ -0.8
TCOF1-209ENST00000506630 TMEM56Q96MV1 263 aa10.07□□□□□ -0.8
TCOF1-209ENST00000506630 TMEM14BQ9NUH8 114 aa10.07□□□□□ -0.8
TCOF1-209ENST00000506630 ZMAT5Q9UDW3 170 aaKnown RBP10.07□□□□□ -0.8
TCOF1-209ENST00000506630 S4R3C0 116 aa10.07□□□□□ -0.8
TCOF1-209ENST00000506630 U3KQK5 164 aa10.07□□□□□ -0.8
TCOF1-209ENST00000506630 IGLV11-55A0A075B6I3 123 aa10.06□□□□□ -0.8
TCOF1-209ENST00000506630 C3orf84H3BNL1 204 aa10.06□□□□□ -0.8
TCOF1-209ENST00000506630 NDUFB8O95169 186 aa10.06□□□□□ -0.8
TCOF1-209ENST00000506630 IGHV3-23P01764 117 aa10.06□□□□□ -0.8
TCOF1-209ENST00000506630 AKR1C4P17516 323 aa10.06□□□□□ -0.8
TCOF1-209ENST00000506630 DHODHQ02127 395 aa10.06□□□□□ -0.8
TCOF1-209ENST00000506630 WT1-ASQ06250 92 aa10.06□□□□□ -0.8
TCOF1-209ENST00000506630 RPEL1Q2QD12 228 aa10.06□□□□□ -0.8
TCOF1-209ENST00000506630 SGPP2Q8IWX5 399 aa10.06□□□□□ -0.8
TCOF1-209ENST00000506630 RRNAD1Q96FB5 475 aaKnown RBP10.06□□□□□ -0.8
TCOF1-209ENST00000506630 TMEM222Q9H0R3 208 aa10.06□□□□□ -0.8
TCOF1-209ENST00000506630 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms