RNA–Protein interactions for RNA: ENST00000506494.1

AP001960.1-201, humanhuman

BASIC

Gene AP001960.1, Length 658 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001960.1-201ENST00000506494 SHANK3Q9BYB0 1731 aa3.19□□□□□ -1.9
AP001960.1-201ENST00000506494 CACNA1SQ13698 1873 aa3.18□□□□□ -1.9
AP001960.1-201ENST00000506494 RTL1A6NKG5 1358 aa3.18□□□□□ -1.9
AP001960.1-201ENST00000506494 hCG_1818297A0A087WSY0 165 aa3.18□□□□□ -1.9
AP001960.1-201ENST00000506494 DPRXA6NFQ7 191 aa3.18□□□□□ -1.9
AP001960.1-201ENST00000506494 FAM159BA6NKW6 160 aa3.18□□□□□ -1.9
AP001960.1-201ENST00000506494 A8MT66 165 aa3.18□□□□□ -1.9
AP001960.1-201ENST00000506494 MSNP26038 577 aaKnown RBP3.18□□□□□ -1.9
AP001960.1-201ENST00000506494 PSMB8P28062 276 aa3.18□□□□□ -1.9
AP001960.1-201ENST00000506494 HLA-DMBP28068 263 aa3.18□□□□□ -1.9
AP001960.1-201ENST00000506494 ALDH3A1P30838 453 aa3.18□□□□□ -1.9
AP001960.1-201ENST00000506494 RPL18Q07020 188 aaKnown RBP3.18□□□□□ -1.9
AP001960.1-201ENST00000506494 KRR1Q13601 381 aaKnown RBP3.18□□□□□ -1.9
AP001960.1-201ENST00000506494 HCP5Q6MZN7 132 aa3.18□□□□□ -1.9
AP001960.1-201ENST00000506494 FAM173BQ6P4H8 233 aa3.18□□□□□ -1.9
AP001960.1-201ENST00000506494 AGTRAPQ6RW13 159 aa3.18□□□□□ -1.9
AP001960.1-201ENST00000506494 ZNF767PQ75MW2 155 aa3.18□□□□□ -1.9
AP001960.1-201ENST00000506494 PHOSPHO2Q8TCD6 241 aa3.18□□□□□ -1.9
AP001960.1-201ENST00000506494 TOMM6Q96B49 74 aa3.18□□□□□ -1.9
AP001960.1-201ENST00000506494 IMMP2LQ96T52 175 aa3.18□□□□□ -1.9
AP001960.1-201ENST00000506494 ZNF471Q9BX82 626 aaPredicted RBP3.18□□□□□ -1.9
AP001960.1-201ENST00000506494 ZNF532Q9HCE3 1301 aa3.18□□□□□ -1.9
AP001960.1-201ENST00000506494 SDHAF1A6NFY7 115 aa3.17□□□□□ -1.9
AP001960.1-201ENST00000506494 C1QAP02745 245 aa3.17□□□□□ -1.9
AP001960.1-201ENST00000506494 CBR1P16152 277 aa3.17□□□□□ -1.9
AP001960.1-201ENST00000506494 G0S2P27469 103 aa3.17□□□□□ -1.9
AP001960.1-201ENST00000506494 GNG10P50151 68 aa3.17□□□□□ -1.9
AP001960.1-201ENST00000506494 MEF2BQ02080 365 aaPredicted RBP3.17□□□□□ -1.9
AP001960.1-201ENST00000506494 PABPC1L2AQ5JQF8 200 aa3.17□□□□□ -1.9
AP001960.1-201ENST00000506494 AADACL3Q5VUY0 350 aa3.17□□□□□ -1.9
AP001960.1-201ENST00000506494 SLC36A1Q7Z2H8 476 aa3.17□□□□□ -1.9
AP001960.1-201ENST00000506494 NDUFB11Q9NX14 153 aa3.17□□□□□ -1.9
AP001960.1-201ENST00000506494 NAT8Q9UHE5 227 aa3.17□□□□□ -1.9
AP001960.1-201ENST00000506494 RBM7Q9Y580 266 aaKnown RBP3.17□□□□□ -1.9
AP001960.1-201ENST00000506494 ITGB4P16144 1822 aa3.16□□□□□ -1.9
AP001960.1-201ENST00000506494 IRGMA1A4Y4 181 aa3.16□□□□□ -1.9
AP001960.1-201ENST00000506494 FABP5P3A8MUU1 101 aa3.16□□□□□ -1.9
AP001960.1-201ENST00000506494 H3BT86 120 aa3.16□□□□□ -1.9
AP001960.1-201ENST00000506494 IFNA10P01566 189 aa3.16□□□□□ -1.9
AP001960.1-201ENST00000506494 C8GP07360 202 aa3.16□□□□□ -1.9
AP001960.1-201ENST00000506494 HINT1P49773 126 aaPredicted RBP3.16□□□□□ -1.9
AP001960.1-201ENST00000506494 EMP1P54849 157 aa3.16□□□□□ -1.9
AP001960.1-201ENST00000506494 TPI1P60174 286 aa3.16□□□□□ -1.9
AP001960.1-201ENST00000506494 C12orf74Q32Q52 190 aa3.16□□□□□ -1.9
AP001960.1-201ENST00000506494 C9orf64Q5T6V5 341 aa3.16□□□□□ -1.9
AP001960.1-201ENST00000506494 LYZL1Q6UWQ5 148 aa3.16□□□□□ -1.9
AP001960.1-201ENST00000506494 OR13C4Q8NGS5 318 aa3.16□□□□□ -1.9
AP001960.1-201ENST00000506494 SELENOSQ9BQE4 189 aa3.16□□□□□ -1.9
AP001960.1-201ENST00000506494 C20orf27Q9GZN8 174 aa3.16□□□□□ -1.9
AP001960.1-201ENST00000506494 HHLA3Q9XRX5 114 aa3.16□□□□□ -1.9
AP001960.1-201ENST00000506494 TIMM22Q9Y584 194 aa3.16□□□□□ -1.9
AP001960.1-201ENST00000506494 EIF3AQ14152 1382 aaKnown RBP3.15□□□□□ -1.9
AP001960.1-201ENST00000506494 TMEM238C9JI98 176 aa3.15□□□□□ -1.91
AP001960.1-201ENST00000506494 FNDC10F2Z333 226 aa3.15□□□□□ -1.91
AP001960.1-201ENST00000506494 SULT1A3P0DMM9 295 aa3.15□□□□□ -1.91
AP001960.1-201ENST00000506494 SULT1A4P0DMN0 295 aa3.15□□□□□ -1.91
AP001960.1-201ENST00000506494 SMIM10L2AP0DMW4 78 aa3.15□□□□□ -1.91
AP001960.1-201ENST00000506494 SMIM10L2BP0DMW5 78 aa3.15□□□□□ -1.91
AP001960.1-201ENST00000506494 PPIBP23284 216 aaKnown RBP3.15□□□□□ -1.91
AP001960.1-201ENST00000506494 ERP29P30040 261 aaKnown RBP3.15□□□□□ -1.91
AP001960.1-201ENST00000506494 POU6F1Q14863 301 aa3.15□□□□□ -1.91
AP001960.1-201ENST00000506494 IBA57Q5T440 356 aaKnown RBP3.15□□□□□ -1.91
AP001960.1-201ENST00000506494 OR51T1Q8NGJ9 327 aa3.15□□□□□ -1.91
AP001960.1-201ENST00000506494 PRRT1Q99946 306 aa3.15□□□□□ -1.91
AP001960.1-201ENST00000506494 DERL1Q9BUN8 251 aa3.15□□□□□ -1.91
AP001960.1-201ENST00000506494 GID8Q9NWU2 228 aa3.15□□□□□ -1.91
AP001960.1-201ENST00000506494 CCL26Q9Y258 94 aa3.15□□□□□ -1.91
AP001960.1-201ENST00000506494 ROBO3Q96MS0 1386 aa3.14□□□□□ -1.91
AP001960.1-201ENST00000506494 ZNF682O95780 498 aa3.14□□□□□ -1.91
AP001960.1-201ENST00000506494 IGHV3-7P01780 117 aa3.14□□□□□ -1.91
AP001960.1-201ENST00000506494 MSMBP08118 114 aa3.14□□□□□ -1.91
AP001960.1-201ENST00000506494 CCL5P13501 91 aa3.14□□□□□ -1.91
AP001960.1-201ENST00000506494 RPL28P46779 137 aaKnown RBP3.14□□□□□ -1.91
AP001960.1-201ENST00000506494 RAB14P61106 215 aa3.14□□□□□ -1.91
AP001960.1-201ENST00000506494 FOXF1Q12946 379 aa3.14□□□□□ -1.91
AP001960.1-201ENST00000506494 ARHGAP11BQ3KRB8 267 aa3.14□□□□□ -1.91
AP001960.1-201ENST00000506494 BRD3OSQ6XYD6 125 aa3.14□□□□□ -1.91
AP001960.1-201ENST00000506494 OR11H6Q8NGC7 330 aa3.14□□□□□ -1.91
AP001960.1-201ENST00000506494 ATPIF1Q9UII2 106 aa3.14□□□□□ -1.91
AP001960.1-201ENST00000506494 REREQ9P2R6 1566 aa3.13□□□□□ -1.91
AP001960.1-201ENST00000506494 TRAV38-1A0A0B4J264 116 aa3.13□□□□□ -1.91
AP001960.1-201ENST00000506494 TRAV41A0A0B4J266 112 aa3.13□□□□□ -1.91
AP001960.1-201ENST00000506494 LGALS1P09382 135 aaKnown RBP3.13□□□□□ -1.91
AP001960.1-201ENST00000506494 ZNF90Q03938 601 aa3.13□□□□□ -1.91
AP001960.1-201ENST00000506494 TNFRSF9Q07011 255 aa3.13□□□□□ -1.91
AP001960.1-201ENST00000506494 OR4X2Q8NGF9 303 aa3.13□□□□□ -1.91
AP001960.1-201ENST00000506494 H1FXQ92522 213 aaKnown RBP3.13□□□□□ -1.91
AP001960.1-201ENST00000506494 SLC7A6Q92536 515 aa3.13□□□□□ -1.91
AP001960.1-201ENST00000506494 ANP32BQ92688 251 aaKnown RBP3.13□□□□□ -1.91
AP001960.1-201ENST00000506494 OR8D2Q9GZM6 311 aa3.13□□□□□ -1.91
AP001960.1-201ENST00000506494 V9GYQ6 96 aa3.13□□□□□ -1.91
AP001960.1-201ENST00000506494 MUC21A0A0G2JKD1 596 aa3.12□□□□□ -1.91
AP001960.1-201ENST00000506494 MUC21A0A140T8X8 626 aa3.12□□□□□ -1.91
AP001960.1-201ENST00000506494 SLC22A1O15245 554 aa3.12□□□□□ -1.91
AP001960.1-201ENST00000506494 ZNF189O75820 626 aaPredicted RBP3.12□□□□□ -1.91
AP001960.1-201ENST00000506494 ATG12O94817 140 aa3.12□□□□□ -1.91
AP001960.1-201ENST00000506494 IGKV1-5P01602 117 aa3.12□□□□□ -1.91
AP001960.1-201ENST00000506494 SMIM17P0DL12 118 aa3.12□□□□□ -1.91
AP001960.1-201ENST00000506494 HSPE1P61604 102 aaKnown RBP3.12□□□□□ -1.91
AP001960.1-201ENST00000506494 ERHP84090 104 aaKnown RBP3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms