RNA–Protein interactions for RNA: ENST00000504627.1

SQSTM1-209, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-209ENST00000504627 IAH1Q2TAA2 248 aaPredicted RBP14.09□□□□□ -0.15
SQSTM1-209ENST00000504627 LCNL1Q6ZST4 164 aa14.09□□□□□ -0.15
SQSTM1-209ENST00000504627 FYTTD1Q96QD9 318 aaKnown RBP14.09□□□□□ -0.15
SQSTM1-209ENST00000504627 P2RX4Q99571 388 aa14.09□□□□□ -0.15
SQSTM1-209ENST00000504627 A0A1B0GU03 582 aa14.08□□□□□ -0.16
SQSTM1-209ENST00000504627 C13orf42A0A1B0GVH6 325 aa14.08□□□□□ -0.16
SQSTM1-209ENST00000504627 MPTX1A8MV57 137 aa14.08□□□□□ -0.16
SQSTM1-209ENST00000504627 K7EIL1 84 aa14.08□□□□□ -0.16
SQSTM1-209ENST00000504627 CCL24O00175 119 aa14.08□□□□□ -0.16
SQSTM1-209ENST00000504627 IGKV1-16P04430 117 aa14.08□□□□□ -0.16
SQSTM1-209ENST00000504627 G6PCP35575 357 aa14.08□□□□□ -0.16
SQSTM1-209ENST00000504627 KRTAP10-11P60412 298 aa14.08□□□□□ -0.16
SQSTM1-209ENST00000504627 FLYWCH2Q96CP2 140 aaKnown RBP14.08□□□□□ -0.16
SQSTM1-209ENST00000504627 RAX2Q96IS3 184 aa14.08□□□□□ -0.16
SQSTM1-209ENST00000504627 OR10C1Q96KK4 312 aa14.08□□□□□ -0.16
SQSTM1-209ENST00000504627 HARBI1Q96MB7 349 aa14.08□□□□□ -0.16
SQSTM1-209ENST00000504627 COA4Q9NYJ1 87 aa14.08□□□□□ -0.16
SQSTM1-209ENST00000504627 KIAA1456Q9P272 454 aa14.08□□□□□ -0.16
SQSTM1-209ENST00000504627 A0A0G2JRQ6 117 aa14.07□□□□□ -0.16
SQSTM1-209ENST00000504627 SHOXO15266 292 aa14.07□□□□□ -0.16
SQSTM1-209ENST00000504627 NBR2O15453 112 aa14.07□□□□□ -0.16
SQSTM1-209ENST00000504627 KRASP01116 189 aa14.07□□□□□ -0.16
SQSTM1-209ENST00000504627 IGF1P05019 195 aa14.07□□□□□ -0.16
SQSTM1-209ENST00000504627 CDX1P47902 265 aaPredicted RBP14.07□□□□□ -0.16
SQSTM1-209ENST00000504627 CD300CQ08708 224 aa14.07□□□□□ -0.16
SQSTM1-209ENST00000504627 EGFEM1PQ0D2K5 195 aa14.07□□□□□ -0.16
SQSTM1-209ENST00000504627 SMCO1Q147U7 214 aa14.07□□□□□ -0.16
SQSTM1-209ENST00000504627 H2BFWTQ7Z2G1 175 aa14.07□□□□□ -0.16
SQSTM1-209ENST00000504627 ZBTB8BQ8NAP8 495 aaPredicted RBP14.07□□□□□ -0.16
SQSTM1-209ENST00000504627 DMBX1Q8NFW5 382 aa14.07□□□□□ -0.16
SQSTM1-209ENST00000504627 OR2T35Q8NGX2 323 aa14.07□□□□□ -0.16
SQSTM1-209ENST00000504627 RHOVQ96L33 236 aa14.07□□□□□ -0.16
SQSTM1-209ENST00000504627 RNF5Q99942 180 aa14.07□□□□□ -0.16
SQSTM1-209ENST00000504627 WI2-2373I1.2A0A1W2PRP0 233 aa14.06□□□□□ -0.16
SQSTM1-209ENST00000504627 IGHG4P01861 327 aa14.06□□□□□ -0.16
SQSTM1-209ENST00000504627 CNTFRP26992 372 aa14.06□□□□□ -0.16
SQSTM1-209ENST00000504627 DEFB136Q30KP8 78 aa14.06□□□□□ -0.16
SQSTM1-209ENST00000504627 TMEM65Q6PI78 240 aa14.06□□□□□ -0.16
SQSTM1-209ENST00000504627 GPR146Q96CH1 333 aa14.06□□□□□ -0.16
SQSTM1-209ENST00000504627 RITA1Q96K30 269 aa14.06□□□□□ -0.16
SQSTM1-209ENST00000504627 PARP11Q9NR21 331 aa14.06□□□□□ -0.16
SQSTM1-209ENST00000504627 TMEM140Q9NV12 185 aa14.06□□□□□ -0.16
SQSTM1-209ENST00000504627 ZMAT5Q9UDW3 170 aaKnown RBP14.06□□□□□ -0.16
SQSTM1-209ENST00000504627 CACNG5Q9UF02 275 aa14.06□□□□□ -0.16
SQSTM1-209ENST00000504627 WSB1Q9Y6I7 421 aa14.06□□□□□ -0.16
SQSTM1-209ENST00000504627 SPDEFO95238 335 aa14.05□□□□□ -0.16
SQSTM1-209ENST00000504627 PET100P0DJ07 73 aa14.05□□□□□ -0.16
SQSTM1-209ENST00000504627 LGALS7P47929 136 aa14.05□□□□□ -0.16
SQSTM1-209ENST00000504627 CFHR3Q02985 330 aa14.05□□□□□ -0.16
SQSTM1-209ENST00000504627 FGL1Q08830 312 aa14.05□□□□□ -0.16
SQSTM1-209ENST00000504627 IL15RAQ13261 267 aa14.05□□□□□ -0.16
SQSTM1-209ENST00000504627 C5orf64Q2M2E5 130 aa14.05□□□□□ -0.16
SQSTM1-209ENST00000504627 RNF152Q8N8N0 203 aa14.05□□□□□ -0.16
SQSTM1-209ENST00000504627 OR4D5Q8NGN0 318 aa14.05□□□□□ -0.16
SQSTM1-209ENST00000504627 VSTM2AQ8TAG5 236 aa14.05□□□□□ -0.16
SQSTM1-209ENST00000504627 PPP1R1CQ8WVI7 109 aa14.05□□□□□ -0.16
SQSTM1-209ENST00000504627 TSNAXQ99598 290 aaKnown RBP14.05□□□□□ -0.16
SQSTM1-209ENST00000504627 BET1LQ9NYM9 111 aa14.05□□□□□ -0.16
SQSTM1-209ENST00000504627 ZNF580Q9UK33 172 aa14.05□□□□□ -0.16
SQSTM1-209ENST00000504627 PITX3O75364 302 aa14.04□□□□□ -0.16
SQSTM1-209ENST00000504627 HLA-DRB1P01911 266 aa14.04□□□□□ -0.16
SQSTM1-209ENST00000504627 C1QBP02746 253 aa14.04□□□□□ -0.16
SQSTM1-209ENST00000504627 SAA1P0DJI8 122 aaPredicted RBP14.04□□□□□ -0.16
SQSTM1-209ENST00000504627 RPS16P62249 146 aaKnown RBP14.04□□□□□ -0.16
SQSTM1-209ENST00000504627 PLGLAQ15195 96 aa14.04□□□□□ -0.16
SQSTM1-209ENST00000504627 ZFP69Q49AA0 526 aa14.04□□□□□ -0.16
SQSTM1-209ENST00000504627 OR4A47Q6IF82 309 aa14.04□□□□□ -0.16
SQSTM1-209ENST00000504627 C4orf3Q8WVX3 66 aa14.04□□□□□ -0.16
SQSTM1-209ENST00000504627 GSKIPQ9P0R6 139 aa14.04□□□□□ -0.16
SQSTM1-209ENST00000504627 CACFD1Q9UGQ2 172 aa14.04□□□□□ -0.16
SQSTM1-209ENST00000504627 IGHV7-81A0A0B4J1V7 117 aa14.03□□□□□ -0.16
SQSTM1-209ENST00000504627 FAM90A26D6RGX4 464 aa14.03□□□□□ -0.16
SQSTM1-209ENST00000504627 G3V318 75 aa14.03□□□□□ -0.16
SQSTM1-209ENST00000504627 G3V3Q6 166 aa14.03□□□□□ -0.16
SQSTM1-209ENST00000504627 ATP6V0E1O15342 81 aa14.03□□□□□ -0.16
SQSTM1-209ENST00000504627 FGF2P09038 288 aa14.03□□□□□ -0.16
SQSTM1-209ENST00000504627 PSMB8P28062 276 aa14.03□□□□□ -0.16
SQSTM1-209ENST00000504627 UBE2KP61086 200 aa14.03□□□□□ -0.16
SQSTM1-209ENST00000504627 VMA21Q3ZAQ7 101 aa14.03□□□□□ -0.16
SQSTM1-209ENST00000504627 AARDQ4LEZ3 155 aa14.03□□□□□ -0.16
SQSTM1-209ENST00000504627 SSX9Q7RTT3 188 aa14.03□□□□□ -0.16
SQSTM1-209ENST00000504627 PUSL1Q8N0Z8 303 aaKnown RBP14.03□□□□□ -0.16
SQSTM1-209ENST00000504627 NPBQ8NG41 125 aa14.03□□□□□ -0.16
SQSTM1-209ENST00000504627 OR4A5Q8NH83 315 aa14.03□□□□□ -0.16
SQSTM1-209ENST00000504627 OR1S1Q8NH92 325 aa14.03□□□□□ -0.16
SQSTM1-209ENST00000504627 WDR89Q96FK6 387 aaPredicted RBP14.03□□□□□ -0.16
SQSTM1-209ENST00000504627 TRAV41A0A0B4J266 112 aa14.02□□□□□ -0.17
SQSTM1-209ENST00000504627 SRRM4A7MD48 611 aaKnown RBP14.02□□□□□ -0.17
SQSTM1-209ENST00000504627 KBTBD11O94819 623 aa14.02□□□□□ -0.17
SQSTM1-209ENST00000504627 NDUFA3O95167 84 aa14.02□□□□□ -0.17
SQSTM1-209ENST00000504627 MPC2O95563 127 aa14.02□□□□□ -0.17
SQSTM1-209ENST00000504627 IGLV2-23P01705 113 aa14.02□□□□□ -0.17
SQSTM1-209ENST00000504627 HNRNPCP07910 306 aaKnown RBP eCLIP14.02□□□□□ -0.17
SQSTM1-209ENST00000504627 NKX2-1P43699 371 aaPredicted RBP14.02□□□□□ -0.17
SQSTM1-209ENST00000504627 IZUMO4Q1ZYL8 232 aa14.02□□□□□ -0.17
SQSTM1-209ENST00000504627 Q6ZRM9 215 aa14.02□□□□□ -0.17
SQSTM1-209ENST00000504627 VKORC1L1Q8N0U8 176 aa14.02□□□□□ -0.17
SQSTM1-209ENST00000504627 OR11H1Q8NG94 326 aa14.02□□□□□ -0.17
SQSTM1-209ENST00000504627 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.02□□□□□ -0.17
SQSTM1-209ENST00000504627 TNCP24821 2201 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms