RNA–Protein interactions for RNA: ENST00000504203.5

MATR3-233, Transcript of matrin 3, human

TSL 2 BASIC

Gene MATR3, Length 2,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-233	ENST00000504203	B2M	P61769	119 aa		10.63	□□□□□ -0.71
MATR3-233	ENST00000504203	GNB1	P62873	340 aa		10.63	□□□□□ -0.71
MATR3-233	ENST00000504203	DMRTC2	Q8IXT2	367 aa	Predicted RBP	10.63	□□□□□ -0.71
MATR3-233	ENST00000504203	OR51G1	Q8NGK1	321 aa		10.63	□□□□□ -0.71
MATR3-233	ENST00000504203	SSMEM1	Q8WWF3	244 aa		10.63	□□□□□ -0.71
MATR3-233	ENST00000504203	RND1	Q92730	232 aa		10.63	□□□□□ -0.71
MATR3-233	ENST00000504203	MRPL20	Q9BYC9	149 aa	Known RBP	10.63	□□□□□ -0.71
MATR3-233	ENST00000504203	TEX50	A0A1B0GTY4	177 aa		10.62	□□□□□ -0.71
MATR3-233	ENST00000504203	CXorf1	O96002	111 aa		10.62	□□□□□ -0.71
MATR3-233	ENST00000504203	SAA1	P0DJI8	122 aa	Predicted RBP	10.62	□□□□□ -0.71
MATR3-233	ENST00000504203	RPL29	P47914	159 aa	Known RBP	10.62	□□□□□ -0.71
MATR3-233	ENST00000504203	NDUFA6	P56556	154 aa		10.62	□□□□□ -0.71
MATR3-233	ENST00000504203	UBE2G2	P60604	165 aa		10.62	□□□□□ -0.71
MATR3-233	ENST00000504203	LYPD2	Q6UXB3	125 aa		10.62	□□□□□ -0.71
MATR3-233	ENST00000504203	OR5AN1	Q8NGI8	311 aa		10.62	□□□□□ -0.71
MATR3-233	ENST00000504203	OSR1	Q8TAX0	266 aa	Predicted RBP	10.62	□□□□□ -0.71
MATR3-233	ENST00000504203	NANP	Q8TBE9	248 aa		10.62	□□□□□ -0.71
MATR3-233	ENST00000504203	CCL17	Q92583	94 aa		10.62	□□□□□ -0.71
MATR3-233	ENST00000504203	FRZB	Q92765	325 aa		10.62	□□□□□ -0.71
MATR3-233	ENST00000504203	SCNM1	Q9BWG6	230 aa		10.62	□□□□□ -0.71
MATR3-233	ENST00000504203	HINT2	Q9BX68	163 aa		10.62	□□□□□ -0.71
MATR3-233	ENST00000504203	PLEKHA3	Q9HB20	300 aa		10.62	□□□□□ -0.71
MATR3-233	ENST00000504203	TLN1	Q9Y490	2541 aa	Known RBP	10.62	□□□□□ -0.71
MATR3-233	ENST00000504203		E7EQL1	145 aa		10.62	□□□□□ -0.71
MATR3-233	ENST00000504203	S100A12	P80511	92 aa		10.62	□□□□□ -0.71
MATR3-233	ENST00000504203	PRR20E	P86478	221 aa		10.62	□□□□□ -0.71
MATR3-233	ENST00000504203	PRR20C	P86479	221 aa		10.62	□□□□□ -0.71
MATR3-233	ENST00000504203	PRR20D	P86480	221 aa		10.62	□□□□□ -0.71
MATR3-233	ENST00000504203	PRR20B	P86481	221 aa		10.62	□□□□□ -0.71
MATR3-233	ENST00000504203	PRR20A	P86496	221 aa		10.62	□□□□□ -0.71
MATR3-233	ENST00000504203	EFNB3	Q15768	340 aa		10.62	□□□□□ -0.71
MATR3-233	ENST00000504203	STPG3	Q8N7X2	389 aa		10.62	□□□□□ -0.71
MATR3-233	ENST00000504203	OR5B3	Q8NH48	314 aa		10.62	□□□□□ -0.71
MATR3-233	ENST00000504203	ZNF596	Q8TC21	504 aa		10.62	□□□□□ -0.71
MATR3-233	ENST00000504203	TXNDC17	Q9BRA2	123 aa		10.62	□□□□□ -0.71
MATR3-233	ENST00000504203	PTPRQ	Q9UMZ3	2332 aa		10.62	□□□□□ -0.71
MATR3-233	ENST00000504203	VSTM5	A8MXK1	200 aa		10.61	□□□□□ -0.71
MATR3-233	ENST00000504203		H0YJW9	148 aa		10.61	□□□□□ -0.71
MATR3-233	ENST00000504203		H7BYZ3	331 aa		10.61	□□□□□ -0.71
MATR3-233	ENST00000504203	TRGC1	P0CF51	173 aa		10.61	□□□□□ -0.71
MATR3-233	ENST00000504203	ATP5I	P56385	69 aa	Predicted RBP	10.61	□□□□□ -0.71
MATR3-233	ENST00000504203	CST9LP1	Q5W188	147 aa		10.61	□□□□□ -0.71
MATR3-233	ENST00000504203	ANAPC16	Q96DE5	110 aa		10.61	□□□□□ -0.71
MATR3-233	ENST00000504203	SEPSECS	Q9HD40	501 aa	Known RBP	10.61	□□□□□ -0.71
MATR3-233	ENST00000504203	FKBP11	Q9NYL4	201 aa		10.61	□□□□□ -0.71
MATR3-233	ENST00000504203	CTSZ	Q9UBR2	303 aa		10.61	□□□□□ -0.71
MATR3-233	ENST00000504203	ARFGEF3	Q5TH69	2177 aa		10.61	□□□□□ -0.71
MATR3-233	ENST00000504203	POLE	Q07864	2286 aa		10.61	□□□□□ -0.71
MATR3-233	ENST00000504203		F6UZH7	168 aa		10.61	□□□□□ -0.71
MATR3-233	ENST00000504203	IGFBP2	P18065	325 aa		10.61	□□□□□ -0.71
MATR3-233	ENST00000504203	TMEM177	Q53S58	311 aa		10.61	□□□□□ -0.71
MATR3-233	ENST00000504203	C2orf83	Q53S99	150 aa		10.61	□□□□□ -0.71
MATR3-233	ENST00000504203	LINC00311	Q8N616	119 aa		10.61	□□□□□ -0.71
MATR3-233	ENST00000504203	C8orf31	Q8N9H6	132 aa		10.61	□□□□□ -0.71
MATR3-233	ENST00000504203	SRD5A3	Q9H8P0	318 aa		10.61	□□□□□ -0.71
MATR3-233	ENST00000504203	NGB	Q9NPG2	151 aa		10.61	□□□□□ -0.71
MATR3-233	ENST00000504203	KAAG1	Q9UBP8	84 aa		10.61	□□□□□ -0.71
MATR3-233	ENST00000504203	NDUFB3	O43676	98 aa		10.6	□□□□□ -0.71
MATR3-233	ENST00000504203	NDUFB4	O95168	129 aa		10.6	□□□□□ -0.71
MATR3-233	ENST00000504203	APOA2	P02652	100 aa		10.6	□□□□□ -0.71
MATR3-233	ENST00000504203	LINC00869	P0C866	280 aa		10.6	□□□□□ -0.71
MATR3-233	ENST00000504203	LOX	P28300	417 aa	Predicted RBP	10.6	□□□□□ -0.71
MATR3-233	ENST00000504203	GALR1	P47211	349 aa		10.6	□□□□□ -0.71
MATR3-233	ENST00000504203	DLX6	P56179	175 aa		10.6	□□□□□ -0.71
MATR3-233	ENST00000504203	RAB31	Q13636	194 aa		10.6	□□□□□ -0.71
MATR3-233	ENST00000504203	LRRC10	Q5BKY1	277 aa		10.6	□□□□□ -0.71
MATR3-233	ENST00000504203	TMEM144	Q7Z5S9	345 aa		10.6	□□□□□ -0.71
MATR3-233	ENST00000504203	LINC01551	Q86U37	167 aa		10.6	□□□□□ -0.71
MATR3-233	ENST00000504203	VKORC1	Q9BQB6	163 aa		10.6	□□□□□ -0.71
MATR3-233	ENST00000504203	DERL1	Q9BUN8	251 aa		10.6	□□□□□ -0.71
MATR3-233	ENST00000504203	DVL1	O14640	695 aa		10.6	□□□□□ -0.71
MATR3-233	ENST00000504203	RNASE2	P10153	161 aa	Known RBP	10.6	□□□□□ -0.71
MATR3-233	ENST00000504203	RHOB	P62745	196 aa		10.6	□□□□□ -0.71
MATR3-233	ENST00000504203	RBPJ	Q06330	500 aa		10.6	□□□□□ -0.71
MATR3-233	ENST00000504203	SPATA31B1P	Q5VZV4	182 aa		10.6	□□□□□ -0.71
MATR3-233	ENST00000504203	FAM71F2	Q6NXP2	309 aa		10.6	□□□□□ -0.71
MATR3-233	ENST00000504203	NECAP1	Q8NC96	275 aa		10.6	□□□□□ -0.71
MATR3-233	ENST00000504203	OR1L8	Q8NGR8	309 aa		10.6	□□□□□ -0.71
MATR3-233	ENST00000504203	H1FX	Q92522	213 aa	Known RBP	10.6	□□□□□ -0.71
MATR3-233	ENST00000504203	ST6GALNAC6	Q969X2	333 aa		10.6	□□□□□ -0.71
MATR3-233	ENST00000504203	HARBI1	Q96MB7	349 aa		10.6	□□□□□ -0.71
MATR3-233	ENST00000504203	ELOVL1	Q9BW60	279 aa		10.6	□□□□□ -0.71
MATR3-233	ENST00000504203	SLC45A2	Q9UMX9	530 aa		10.6	□□□□□ -0.71
MATR3-233	ENST00000504203	IGKV1OR2-108	A0A075B7D4	117 aa		10.59	□□□□□ -0.71
MATR3-233	ENST00000504203	KALRN	O60229	2985 aa		10.59	□□□□□ -0.71
MATR3-233	ENST00000504203	COL8A2	P25067	703 aa		10.59	□□□□□ -0.71
MATR3-233	ENST00000504203	GCHFR	P30047	84 aa		10.59	□□□□□ -0.71
MATR3-233	ENST00000504203	MOB3B	Q86TA1	216 aa		10.59	□□□□□ -0.71
MATR3-233	ENST00000504203	OR5B12	Q96R08	314 aa		10.59	□□□□□ -0.71
MATR3-233	ENST00000504203	DYNLRB1	Q9NP97	96 aa		10.59	□□□□□ -0.71
MATR3-233	ENST00000504203	NDUFA4L2	Q9NRX3	87 aa		10.59	□□□□□ -0.71
MATR3-233	ENST00000504203	TRBV20OR9-2	A0A075B6H5	130 aa		10.58	□□□□□ -0.72
MATR3-233	ENST00000504203		A0A087X0M5	115 aa		10.58	□□□□□ -0.72
MATR3-233	ENST00000504203		A0A1B0GX30	115 aa		10.58	□□□□□ -0.72
MATR3-233	ENST00000504203	INS-IGF2	F8WCM5	200 aa		10.58	□□□□□ -0.72
MATR3-233	ENST00000504203	FAM87A	P0C7U9	286 aa		10.58	□□□□□ -0.72
MATR3-233	ENST00000504203	CD99	P14209	185 aa		10.58	□□□□□ -0.72
MATR3-233	ENST00000504203	S100P	P25815	95 aa		10.58	□□□□□ -0.72
MATR3-233	ENST00000504203	REG1B	P48304	166 aa		10.58	□□□□□ -0.72
MATR3-233	ENST00000504203	ZNF137P	P52743	207 aa		10.58	□□□□□ -0.72

Retrieved 100 of 20,778 RNA–protein pairs in 32 ms