RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 ARV1Q9H2C2 271 aa5.5□□□□□ -1.53
TOPBP1-203ENST00000503464 NDUFA4L2Q9NRX3 87 aa5.5□□□□□ -1.53
TOPBP1-203ENST00000503464 METTL1Q9UBP6 276 aaKnown RBP5.5□□□□□ -1.53
TOPBP1-203ENST00000503464 MDFIC2A0A1B0GVS7 189 aa5.49□□□□□ -1.53
TOPBP1-203ENST00000503464 RPS10-NUDT3A0A1W2PQS6 291 aa5.49□□□□□ -1.53
TOPBP1-203ENST00000503464 KANTRA0A1W2PQU2 76 aa5.49□□□□□ -1.53
TOPBP1-203ENST00000503464 TEX22C9J3V5 150 aa5.49□□□□□ -1.53
TOPBP1-203ENST00000503464 INS-IGF2F8WCM5 200 aa5.49□□□□□ -1.53
TOPBP1-203ENST00000503464 J3QLI3 93 aa5.49□□□□□ -1.53
TOPBP1-203ENST00000503464 RRHO14718 337 aa5.49□□□□□ -1.53
TOPBP1-203ENST00000503464 NBR2O15453 112 aa5.49□□□□□ -1.53
TOPBP1-203ENST00000503464 HOXA1P49639 335 aaPredicted RBP5.49□□□□□ -1.53
TOPBP1-203ENST00000503464 SULT1A1P50225 295 aa5.49□□□□□ -1.53
TOPBP1-203ENST00000503464 DYNLT3P51808 116 aa5.49□□□□□ -1.53
TOPBP1-203ENST00000503464 UBA52P62987 128 aaKnown RBP5.49□□□□□ -1.53
TOPBP1-203ENST00000503464 NDPQ00604 133 aa5.49□□□□□ -1.53
TOPBP1-203ENST00000503464 WT1-ASQ06250 92 aa5.49□□□□□ -1.53
TOPBP1-203ENST00000503464 CLINT1Q14677 625 aa5.49□□□□□ -1.53
TOPBP1-203ENST00000503464 MMDQ15546 238 aa5.49□□□□□ -1.53
TOPBP1-203ENST00000503464 VMA21Q3ZAQ7 101 aa5.49□□□□□ -1.53
TOPBP1-203ENST00000503464 ALKAL2Q6UX46 152 aa5.49□□□□□ -1.53
TOPBP1-203ENST00000503464 C19orf35Q6ZS72 473 aa5.49□□□□□ -1.53
TOPBP1-203ENST00000503464 BCL6BQ8N143 479 aaPredicted RBP5.49□□□□□ -1.53
TOPBP1-203ENST00000503464 TMEM217Q8N7C4 229 aa5.49□□□□□ -1.53
TOPBP1-203ENST00000503464 OR8H1Q8NGG4 311 aa5.49□□□□□ -1.53
TOPBP1-203ENST00000503464 OR5C1Q8NGR4 320 aa5.49□□□□□ -1.53
TOPBP1-203ENST00000503464 OR2T10Q8NGZ9 312 aa5.49□□□□□ -1.53
TOPBP1-203ENST00000503464 OR5B3Q8NH48 314 aa5.49□□□□□ -1.53
TOPBP1-203ENST00000503464 VSTM2AQ8TAG5 236 aa5.49□□□□□ -1.53
TOPBP1-203ENST00000503464 TSNAXQ99598 290 aaKnown RBP5.49□□□□□ -1.53
TOPBP1-203ENST00000503464 AIFM2Q9BRQ8 373 aa5.49□□□□□ -1.53
TOPBP1-203ENST00000503464 ZNF471Q9BX82 626 aaPredicted RBP5.49□□□□□ -1.53
TOPBP1-203ENST00000503464 SLC25A31Q9H0C2 315 aa5.49□□□□□ -1.53
TOPBP1-203ENST00000503464 MEGF9Q9H1U4 602 aa5.49□□□□□ -1.53
TOPBP1-203ENST00000503464 NUP50Q9UKX7 468 aa5.49□□□□□ -1.53
TOPBP1-203ENST00000503464 RFNGQ9Y644 331 aa5.49□□□□□ -1.53
TOPBP1-203ENST00000503464 TEX15Q9BXT5 2789 aa5.49□□□□□ -1.53
TOPBP1-203ENST00000503464 IGLC7A0M8Q6 106 aa5.48□□□□□ -1.53
TOPBP1-203ENST00000503464 TAAR5O14804 337 aa5.48□□□□□ -1.53
TOPBP1-203ENST00000503464 CA2P00918 260 aa5.48□□□□□ -1.53
TOPBP1-203ENST00000503464 RNASE2P10153 161 aaKnown RBP5.48□□□□□ -1.53
TOPBP1-203ENST00000503464 AREGP15514 252 aa5.48□□□□□ -1.53
TOPBP1-203ENST00000503464 TMEM11P17152 192 aa5.48□□□□□ -1.53
TOPBP1-203ENST00000503464 NUP62P37198 522 aaPredicted RBP5.48□□□□□ -1.53
TOPBP1-203ENST00000503464 COMPP49747 757 aaPredicted RBP5.48□□□□□ -1.53
TOPBP1-203ENST00000503464 MFAP2P55001 183 aa5.48□□□□□ -1.53
TOPBP1-203ENST00000503464 BAXQ07812 192 aa5.48□□□□□ -1.53
TOPBP1-203ENST00000503464 HES1Q14469 280 aa5.48□□□□□ -1.53
TOPBP1-203ENST00000503464 C5orf64Q2M2E5 130 aa5.48□□□□□ -1.53
TOPBP1-203ENST00000503464 VWC2Q2TAL6 325 aa5.48□□□□□ -1.53
TOPBP1-203ENST00000503464 FAM74A1Q5RGS3 127 aa5.48□□□□□ -1.53
TOPBP1-203ENST00000503464 CYB5R2Q6BCY4 276 aa5.48□□□□□ -1.53
TOPBP1-203ENST00000503464 PPP1R27Q86WC6 154 aa5.48□□□□□ -1.53
TOPBP1-203ENST00000503464 Q8N9W7 124 aa5.48□□□□□ -1.53
TOPBP1-203ENST00000503464 UBAC2Q8NBM4 344 aa5.48□□□□□ -1.53
TOPBP1-203ENST00000503464 OR1L8Q8NGR8 309 aa5.48□□□□□ -1.53
TOPBP1-203ENST00000503464 PCNPQ8WW12 178 aaKnown RBP5.48□□□□□ -1.53
TOPBP1-203ENST00000503464 CIB3Q96Q77 187 aaPredicted RBP5.48□□□□□ -1.53
TOPBP1-203ENST00000503464 CLCC1Q96S66 551 aa5.48□□□□□ -1.53
TOPBP1-203ENST00000503464 ATP5SQ99766 215 aa5.48□□□□□ -1.53
TOPBP1-203ENST00000503464 HINT2Q9BX68 163 aa5.48□□□□□ -1.53
TOPBP1-203ENST00000503464 SH3BGRL3Q9H299 93 aa5.48□□□□□ -1.53
TOPBP1-203ENST00000503464 PLEKHA3Q9HB20 300 aa5.48□□□□□ -1.53
TOPBP1-203ENST00000503464 HEYLQ9NQ87 328 aaPredicted RBP5.48□□□□□ -1.53
TOPBP1-203ENST00000503464 ZC4H2Q9NQZ6 224 aa5.48□□□□□ -1.53
TOPBP1-203ENST00000503464 STRAPQ9Y3F4 350 aaKnown RBP5.48□□□□□ -1.53
TOPBP1-203ENST00000503464 FBXO7Q9Y3I1 522 aa5.48□□□□□ -1.53
TOPBP1-203ENST00000503464 DMRT1Q9Y5R6 373 aa5.48□□□□□ -1.53
TOPBP1-203ENST00000503464 MYO9AB2RTY4 2548 aa5.48□□□□□ -1.53
TOPBP1-203ENST00000503464 SMAD7O15105 426 aaKnown RBP5.47□□□□□ -1.53
TOPBP1-203ENST00000503464 AMY1AP04745 511 aa5.47□□□□□ -1.53
TOPBP1-203ENST00000503464 REG1AP05451 166 aa5.47□□□□□ -1.53
TOPBP1-203ENST00000503464 C4BPBP20851 252 aa5.47□□□□□ -1.53
TOPBP1-203ENST00000503464 MDKP21741 143 aaPredicted RBP5.47□□□□□ -1.53
TOPBP1-203ENST00000503464 NPY1RP25929 384 aa5.47□□□□□ -1.53
TOPBP1-203ENST00000503464 MAS1LP35410 378 aa5.47□□□□□ -1.53
TOPBP1-203ENST00000503464 RPL27AP46776 148 aaKnown RBP5.47□□□□□ -1.53
TOPBP1-203ENST00000503464 GNB1P62873 340 aa5.47□□□□□ -1.53
TOPBP1-203ENST00000503464 SLC38A11Q08AI6 406 aa5.47□□□□□ -1.53
TOPBP1-203ENST00000503464 TNXAQ16473 311 aa5.47□□□□□ -1.53
TOPBP1-203ENST00000503464 TUSC1Q2TAM9 212 aa5.47□□□□□ -1.53
TOPBP1-203ENST00000503464 ASPHD1Q5U4P2 390 aa5.47□□□□□ -1.53
TOPBP1-203ENST00000503464 PVRIGQ6DKI7 326 aa5.47□□□□□ -1.53
TOPBP1-203ENST00000503464 OR8G2PQ6IF36 304 aa5.47□□□□□ -1.53
TOPBP1-203ENST00000503464 ZNF767PQ75MW2 155 aa5.47□□□□□ -1.53
TOPBP1-203ENST00000503464 STX12Q86Y82 276 aa5.47□□□□□ -1.53
TOPBP1-203ENST00000503464 BAP18Q8IXM2 172 aa5.47□□□□□ -1.53
TOPBP1-203ENST00000503464 MMD2Q8IY49 270 aa5.47□□□□□ -1.53
TOPBP1-203ENST00000503464 SLC24A4Q8NFF2 622 aa5.47□□□□□ -1.53
TOPBP1-203ENST00000503464 OR1S2Q8NGQ3 325 aa5.47□□□□□ -1.53
TOPBP1-203ENST00000503464 TMED6Q8WW62 240 aa5.47□□□□□ -1.53
TOPBP1-203ENST00000503464 SRSF12Q8WXF0 261 aaKnown RBP5.47□□□□□ -1.53
TOPBP1-203ENST00000503464 ZNF48Q96MX3 618 aaPredicted RBP5.47□□□□□ -1.53
TOPBP1-203ENST00000503464 HSPB9Q9BQS6 159 aa5.47□□□□□ -1.53
TOPBP1-203ENST00000503464 GINS3Q9BRX5 216 aa5.47□□□□□ -1.53
TOPBP1-203ENST00000503464 COMMD5Q9GZQ3 224 aa5.47□□□□□ -1.53
TOPBP1-203ENST00000503464 FKBP11Q9NYL4 201 aa5.47□□□□□ -1.53
TOPBP1-203ENST00000503464 CACFD1Q9UGQ2 172 aa5.47□□□□□ -1.53
TOPBP1-203ENST00000503464 ACANP16112 2415 aa5.46□□□□□ -1.53
TOPBP1-203ENST00000503464 IGHV7-81A0A0B4J1V7 117 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms