RNA–Protein interactions for RNA: ENST00000499732.2

NEAT1-201, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 2 BASIC

Gene NEAT1, Length 1,811 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-201ENST00000499732 ICE1Q9Y2F5 2266 aa11.97□□□□□ -0.49
NEAT1-201ENST00000499732 KIR2DL5BA0A0G2JN68 375 aa11.97□□□□□ -0.49
NEAT1-201ENST00000499732 KIR2DL5BA0A0G2JPC4 375 aa11.97□□□□□ -0.49
NEAT1-201ENST00000499732 A1L4Q6 167 aa11.97□□□□□ -0.49
NEAT1-201ENST00000499732 FAM90A27PA6NNH2 459 aa11.97□□□□□ -0.49
NEAT1-201ENST00000499732 NDUFB4O95168 129 aa11.97□□□□□ -0.49
NEAT1-201ENST00000499732 HPRT1P00492 218 aa11.97□□□□□ -0.49
NEAT1-201ENST00000499732 SNRPCP09234 159 aaKnown RBP11.97□□□□□ -0.49
NEAT1-201ENST00000499732 STAG3L2P0CL84 134 aa11.97□□□□□ -0.49
NEAT1-201ENST00000499732 STAG3L3P0CL85 134 aa11.97□□□□□ -0.49
NEAT1-201ENST00000499732 YPEL3P61236 119 aaPredicted RBP11.97□□□□□ -0.49
NEAT1-201ENST00000499732 RPS16P62249 146 aaKnown RBP11.97□□□□□ -0.49
NEAT1-201ENST00000499732 KIR2DL5AQ8N109 375 aa11.97□□□□□ -0.49
NEAT1-201ENST00000499732 OR5T1Q8NG75 326 aa11.97□□□□□ -0.49
NEAT1-201ENST00000499732 DUSP13Q9UII6 198 aa11.97□□□□□ -0.49
NEAT1-201ENST00000499732 NBPF19A0A087WUL8 3843 aa11.97□□□□□ -0.49
NEAT1-201ENST00000499732 IGLV3-9A0A075B6K5 115 aa11.96□□□□□ -0.49
NEAT1-201ENST00000499732 TRAV38-1A0A0B4J264 116 aa11.96□□□□□ -0.49
NEAT1-201ENST00000499732 CXorf1O96002 111 aa11.96□□□□□ -0.49
NEAT1-201ENST00000499732 OR4A8P0C604 315 aa11.96□□□□□ -0.49
NEAT1-201ENST00000499732 OR9G9P0C7N8 305 aa11.96□□□□□ -0.49
NEAT1-201ENST00000499732 DEFA4P12838 97 aa11.96□□□□□ -0.49
NEAT1-201ENST00000499732 UBE2G2P60604 165 aa11.96□□□□□ -0.49
NEAT1-201ENST00000499732 ERVFC1-1P60608 527 aa11.96□□□□□ -0.49
NEAT1-201ENST00000499732 SPINK9Q5DT21 86 aa11.96□□□□□ -0.49
NEAT1-201ENST00000499732 C1orf194Q5T5A4 169 aa11.96□□□□□ -0.49
NEAT1-201ENST00000499732 FAM53AQ6NSI3 398 aaPredicted RBP11.96□□□□□ -0.49
NEAT1-201ENST00000499732 TMEM108Q6UXF1 575 aa11.96□□□□□ -0.49
NEAT1-201ENST00000499732 WDR82Q6UXN9 313 aa11.96□□□□□ -0.49
NEAT1-201ENST00000499732 NGBQ9NPG2 151 aa11.96□□□□□ -0.49
NEAT1-201ENST00000499732 HCFC1P51610 2035 aa11.96□□□□□ -0.49
NEAT1-201ENST00000499732 WNT9BO14905 357 aa11.95□□□□□ -0.5
NEAT1-201ENST00000499732 SPINT2O43291 252 aa11.95□□□□□ -0.5
NEAT1-201ENST00000499732 THBDP07204 575 aa11.95□□□□□ -0.5
NEAT1-201ENST00000499732 OR10J1P30954 320 aa11.95□□□□□ -0.5
NEAT1-201ENST00000499732 DUTP33316 252 aaKnown RBP11.95□□□□□ -0.5
NEAT1-201ENST00000499732 SSTR5P35346 364 aa11.95□□□□□ -0.5
NEAT1-201ENST00000499732 EDDM3BP56851 147 aa11.95□□□□□ -0.5
NEAT1-201ENST00000499732 KLF3P57682 345 aaPredicted RBP11.95□□□□□ -0.5
NEAT1-201ENST00000499732 SMIM21Q3B7S5 101 aa11.95□□□□□ -0.5
NEAT1-201ENST00000499732 VHLLQ6RSH7 139 aa11.95□□□□□ -0.5
NEAT1-201ENST00000499732 TREML4Q6UXN2 200 aa11.95□□□□□ -0.5
NEAT1-201ENST00000499732 OR13A1Q8NGR1 328 aa11.95□□□□□ -0.5
NEAT1-201ENST00000499732 SGMS2Q8NHU3 365 aa11.95□□□□□ -0.5
NEAT1-201ENST00000499732 TMEM204Q9BSN7 226 aa11.95□□□□□ -0.5
NEAT1-201ENST00000499732 MYO9AB2RTY4 2548 aa11.95□□□□□ -0.5
NEAT1-201ENST00000499732 PRSS46E5RG02 174 aa11.95□□□□□ -0.5
NEAT1-201ENST00000499732 RBFOX2O43251 390 aaKnown RBP eCLIP11.95□□□□□ -0.55e-26■■□□□ 12.7
NEAT1-201ENST00000499732 ARL14EPLP0DKL9 152 aa11.95□□□□□ -0.5
NEAT1-201ENST00000499732 SELENOTP62341 195 aa11.95□□□□□ -0.5
NEAT1-201ENST00000499732 HOXA4Q00056 320 aaPredicted RBP11.95□□□□□ -0.5
NEAT1-201ENST00000499732 PRSS8Q16651 343 aa11.95□□□□□ -0.5
NEAT1-201ENST00000499732 GCSAMLQ5JQS6 135 aa11.95□□□□□ -0.5
NEAT1-201ENST00000499732 PRAMEF5Q5TYX0 476 aa11.95□□□□□ -0.5
NEAT1-201ENST00000499732 MRPL52Q86TS9 123 aaKnown RBP11.95□□□□□ -0.5
NEAT1-201ENST00000499732 WFDC8Q8IUA0 241 aa11.95□□□□□ -0.5
NEAT1-201ENST00000499732 TGIF2LXQ8IUE1 241 aa11.95□□□□□ -0.5
NEAT1-201ENST00000499732 OR2Z1Q8NG97 314 aa11.95□□□□□ -0.5
NEAT1-201ENST00000499732 WFIKKN1Q96NZ8 548 aa11.95□□□□□ -0.5
NEAT1-201ENST00000499732 NEU1Q99519 415 aa11.95□□□□□ -0.5
NEAT1-201ENST00000499732 DERL1Q9BUN8 251 aa11.95□□□□□ -0.5
NEAT1-201ENST00000499732 GGTLC1Q9BX51 225 aa11.95□□□□□ -0.5
NEAT1-201ENST00000499732 NAGKQ9UJ70 344 aa11.95□□□□□ -0.5
NEAT1-201ENST00000499732 PSG11Q9UQ72 335 aa11.95□□□□□ -0.5
NEAT1-201ENST00000499732 C15orf65H3BRN8 121 aa11.94□□□□□ -0.5
NEAT1-201ENST00000499732 EREGO14944 169 aa11.94□□□□□ -0.5
NEAT1-201ENST00000499732 EGR1P18146 543 aa11.94□□□□□ -0.5
NEAT1-201ENST00000499732 VDAC2P45880 294 aaPredicted RBP11.94□□□□□ -0.5
NEAT1-201ENST00000499732 GPR12P47775 334 aa11.94□□□□□ -0.5
NEAT1-201ENST00000499732 MZT1Q08AG7 82 aa11.94□□□□□ -0.5
NEAT1-201ENST00000499732 HIST2H2BCQ6DN03 193 aa11.94□□□□□ -0.5
NEAT1-201ENST00000499732 ZNF114Q8NC26 417 aa11.94□□□□□ -0.5
NEAT1-201ENST00000499732 NUP37Q8NFH4 326 aa11.94□□□□□ -0.5
NEAT1-201ENST00000499732 OR4A16Q8NH70 328 aa11.94□□□□□ -0.5
NEAT1-201ENST00000499732 MGST2Q99735 147 aa11.94□□□□□ -0.5
NEAT1-201ENST00000499732 JPT1Q9UK76 154 aa11.94□□□□□ -0.5
NEAT1-201ENST00000499732 LY96Q9Y6Y9 160 aa11.94□□□□□ -0.5
NEAT1-201ENST00000499732 DPRXA6NFQ7 191 aa11.93□□□□□ -0.5
NEAT1-201ENST00000499732 TCAPO15273 167 aa11.93□□□□□ -0.5
NEAT1-201ENST00000499732 SCGB1D1O95968 90 aa11.93□□□□□ -0.5
NEAT1-201ENST00000499732 ESDP10768 282 aa11.93□□□□□ -0.5
NEAT1-201ENST00000499732 ADMP35318 185 aa11.93□□□□□ -0.5
NEAT1-201ENST00000499732 TEX38Q6PEX7 206 aa11.93□□□□□ -0.5
NEAT1-201ENST00000499732 OR10G8Q8NGN5 311 aa11.93□□□□□ -0.5
NEAT1-201ENST00000499732 CMTM2Q8TAZ6 248 aa11.93□□□□□ -0.5
NEAT1-201ENST00000499732 POLR3KQ9Y2Y1 108 aaPredicted RBP11.93□□□□□ -0.5
NEAT1-201ENST00000499732 TRBV20OR9-2A0A075B6H5 130 aa11.93□□□□□ -0.5
NEAT1-201ENST00000499732 IGHV3-43A0A0B4J1X8 118 aa11.93□□□□□ -0.5
NEAT1-201ENST00000499732 M0R143 59 aa11.93□□□□□ -0.5
NEAT1-201ENST00000499732 IGHV3-43DP0DP04 118 aa11.93□□□□□ -0.5
NEAT1-201ENST00000499732 KIR2DS2P43631 304 aa11.93□□□□□ -0.5
NEAT1-201ENST00000499732 ERVK-16P61578 105 aa11.93□□□□□ -0.5
NEAT1-201ENST00000499732 PAFAH1B2P68402 229 aa11.93□□□□□ -0.5
NEAT1-201ENST00000499732 CDSNQ15517 529 aa11.93□□□□□ -0.5
NEAT1-201ENST00000499732 ZNF124Q15973 351 aa11.93□□□□□ -0.5
NEAT1-201ENST00000499732 C11orf52Q96A22 123 aa11.93□□□□□ -0.5
NEAT1-201ENST00000499732 MS4A10Q96PG2 267 aa11.93□□□□□ -0.5
NEAT1-201ENST00000499732 PATZ1Q9HBE1 687 aaKnown RBP11.93□□□□□ -0.5
NEAT1-201ENST00000499732 IL36BQ9NZH7 164 aa11.93□□□□□ -0.5
NEAT1-201ENST00000499732 CENPEQ02224 2701 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms