RNA–Protein interactions for RNA: ENST00000498837.1

SEC61A1-207, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2

Gene SEC61A1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-207ENST00000498837 DNAH17Q9UFH2 4485 aa10.75□□□□□ -0.69
SEC61A1-207ENST00000498837 PKHD1P08F94 4074 aa10.74□□□□□ -0.69
SEC61A1-207ENST00000498837 MPTX1A8MV57 137 aa10.74□□□□□ -0.69
SEC61A1-207ENST00000498837 NDUFA4O00483 81 aa10.74□□□□□ -0.69
SEC61A1-207ENST00000498837 DEFB4AO15263 64 aa10.74□□□□□ -0.69
SEC61A1-207ENST00000498837 PTHLHP12272 177 aa10.74□□□□□ -0.69
SEC61A1-207ENST00000498837 ADMP35318 185 aa10.74□□□□□ -0.69
SEC61A1-207ENST00000498837 MFAP2P55001 183 aa10.74□□□□□ -0.69
SEC61A1-207ENST00000498837 OR11H2Q8NH07 326 aa10.74□□□□□ -0.69
SEC61A1-207ENST00000498837 C2CD4CQ8TF44 421 aa10.74□□□□□ -0.69
SEC61A1-207ENST00000498837 BSCL2Q96G97 398 aaPredicted RBP10.74□□□□□ -0.69
SEC61A1-207ENST00000498837 AIFM2Q9BRQ8 373 aa10.74□□□□□ -0.69
SEC61A1-207ENST00000498837 COMMD5Q9GZQ3 224 aa10.74□□□□□ -0.69
SEC61A1-207ENST00000498837 MFFQ9GZY8 342 aa10.74□□□□□ -0.69
SEC61A1-207ENST00000498837 FAT2Q9NYQ8 4349 aa10.73□□□□□ -0.69
SEC61A1-207ENST00000498837 F8W735 103 aaPredicted RBP10.73□□□□□ -0.69
SEC61A1-207ENST00000498837 K7EMT4 169 aa10.73□□□□□ -0.69
SEC61A1-207ENST00000498837 SULT1C2O00338 296 aa10.73□□□□□ -0.69
SEC61A1-207ENST00000498837 SERPINE2P07093 398 aa10.73□□□□□ -0.69
SEC61A1-207ENST00000498837 OR13C7P0DN81 318 aa10.73□□□□□ -0.69
SEC61A1-207ENST00000498837 MYL9P24844 172 aa10.73□□□□□ -0.69
SEC61A1-207ENST00000498837 TFPI2P48307 235 aa10.73□□□□□ -0.69
SEC61A1-207ENST00000498837 WT1-ASQ06250 92 aa10.73□□□□□ -0.69
SEC61A1-207ENST00000498837 SPSB3Q6PJ21 355 aa10.73□□□□□ -0.69
SEC61A1-207ENST00000498837 GDPD1Q8N9F7 314 aa10.73□□□□□ -0.69
SEC61A1-207ENST00000498837 ZNF414Q96IQ9 312 aa10.73□□□□□ -0.69
SEC61A1-207ENST00000498837 RNF2Q99496 336 aa10.73□□□□□ -0.69
SEC61A1-207ENST00000498837 SRSF8Q9BRL6 282 aaKnown RBP10.73□□□□□ -0.69
SEC61A1-207ENST00000498837 QTRT1Q9BXR0 403 aaKnown RBP10.73□□□□□ -0.69
SEC61A1-207ENST00000498837 C6orf62Q9GZU0 229 aaPredicted RBP10.73□□□□□ -0.69
SEC61A1-207ENST00000498837 C11orf68Q9H3H3 251 aaKnown RBP10.73□□□□□ -0.69
SEC61A1-207ENST00000498837 APLNQ9ULZ1 77 aa10.73□□□□□ -0.69
SEC61A1-207ENST00000498837 IGKV3-7A0A075B6H7 116 aa10.72□□□□□ -0.69
SEC61A1-207ENST00000498837 RBFOX2O43251 390 aaKnown RBP eCLIP10.72□□□□□ -0.69
SEC61A1-207ENST00000498837 HPRT1P00492 218 aa10.72□□□□□ -0.69
SEC61A1-207ENST00000498837 NQO2P16083 231 aa10.72□□□□□ -0.69
SEC61A1-207ENST00000498837 FCGR2CP31995 323 aa10.72□□□□□ -0.69
SEC61A1-207ENST00000498837 TAS2R31P59538 309 aa10.72□□□□□ -0.69
SEC61A1-207ENST00000498837 GNG2P59768 71 aa10.72□□□□□ -0.69
SEC61A1-207ENST00000498837 POU2AF1Q16633 256 aa10.72□□□□□ -0.69
SEC61A1-207ENST00000498837 PRSS48Q7RTY5 328 aa10.72□□□□□ -0.69
SEC61A1-207ENST00000498837 UBAC2Q8NBM4 344 aa10.72□□□□□ -0.69
SEC61A1-207ENST00000498837 SCARB1Q8WTV0 552 aa10.72□□□□□ -0.69
SEC61A1-207ENST00000498837 TMEM140Q9NV12 185 aa10.72□□□□□ -0.69
SEC61A1-207ENST00000498837 C21orf62Q9NYP8 219 aa10.72□□□□□ -0.69
SEC61A1-207ENST00000498837 SMPXQ9UHP9 88 aa10.72□□□□□ -0.69
SEC61A1-207ENST00000498837 ETV7Q9Y603 341 aa10.72□□□□□ -0.69
SEC61A1-207ENST00000498837 DNAH2Q9P225 4427 aa10.72□□□□□ -0.69
SEC61A1-207ENST00000498837 IGHV3-49A0A0A0MS15 119 aa10.71□□□□□ -0.69
SEC61A1-207ENST00000498837 TEX50A0A1B0GTY4 177 aa10.71□□□□□ -0.69
SEC61A1-207ENST00000498837 IGLL5B9A064 214 aa10.71□□□□□ -0.69
SEC61A1-207ENST00000498837 CHEK1O14757 476 aa10.71□□□□□ -0.69
SEC61A1-207ENST00000498837 TRAPPC2P0DI81 140 aa10.71□□□□□ -0.69
SEC61A1-207ENST00000498837 TRAPPC2BP0DI82 140 aa10.71□□□□□ -0.69
SEC61A1-207ENST00000498837 GVQW1Q8N7I0 195 aa10.71□□□□□ -0.69
SEC61A1-207ENST00000498837 DMBX1Q8NFW5 382 aa10.71□□□□□ -0.69
SEC61A1-207ENST00000498837 OR13F1Q8NGS4 319 aa10.71□□□□□ -0.69
SEC61A1-207ENST00000498837 RHPN1-AS1Q9BWJ2 59 aa10.71□□□□□ -0.69
SEC61A1-207ENST00000498837 SLC5A7Q9GZV3 580 aa10.71□□□□□ -0.69
SEC61A1-207ENST00000498837 VCXQ9H320 206 aa10.71□□□□□ -0.69
SEC61A1-207ENST00000498837 TRDV1A0A1B0GX56 115 aa10.7□□□□□ -0.7
SEC61A1-207ENST00000498837 C15orf62A8K5M9 175 aa10.7□□□□□ -0.7
SEC61A1-207ENST00000498837 K7EIM0 57 aa10.7□□□□□ -0.7
SEC61A1-207ENST00000498837 CYB5BO43169 146 aa10.7□□□□□ -0.7
SEC61A1-207ENST00000498837 PPYP01298 95 aa10.7□□□□□ -0.7
SEC61A1-207ENST00000498837 CTSGP08311 255 aa10.7□□□□□ -0.7
SEC61A1-207ENST00000498837 AQP4P55087 323 aa10.7□□□□□ -0.7
SEC61A1-207ENST00000498837 TCTAP57738 103 aa10.7□□□□□ -0.7
SEC61A1-207ENST00000498837 ARPC4P59998 168 aa10.7□□□□□ -0.7
SEC61A1-207ENST00000498837 MSMO1Q15800 293 aa10.7□□□□□ -0.7
SEC61A1-207ENST00000498837 C22orf42Q6IC83 251 aa10.7□□□□□ -0.7
SEC61A1-207ENST00000498837 GBGT1Q8N5D6 347 aa10.7□□□□□ -0.7
SEC61A1-207ENST00000498837 ZBTB34Q8NCN2 500 aa10.7□□□□□ -0.7
SEC61A1-207ENST00000498837 BEST4Q8NFU0 473 aa10.7□□□□□ -0.7
SEC61A1-207ENST00000498837 OR51H1Q8NH63 302 aa10.7□□□□□ -0.7
SEC61A1-207ENST00000498837 NRG4Q8WWG1 115 aa10.7□□□□□ -0.7
SEC61A1-207ENST00000498837 NDUFB11Q9NX14 153 aa10.7□□□□□ -0.7
SEC61A1-207ENST00000498837 F11RQ9Y624 299 aaKnown RBP10.7□□□□□ -0.7
SEC61A1-207ENST00000498837 IGHV3OR16-13A0A075B7E8 117 aa10.69□□□□□ -0.7
SEC61A1-207ENST00000498837 IGHV3-74A0A0B4J1X5 117 aa10.69□□□□□ -0.7
SEC61A1-207ENST00000498837 IGHV7-4-1A0A0J9YVY3 117 aa10.69□□□□□ -0.7
SEC61A1-207ENST00000498837 XRCC3O43542 346 aa10.69□□□□□ -0.7
SEC61A1-207ENST00000498837 CMC4P56277 68 aaPredicted RBP10.69□□□□□ -0.7
SEC61A1-207ENST00000498837 FXYD4P59646 89 aa10.69□□□□□ -0.7
SEC61A1-207ENST00000498837 CATR1Q13166 79 aa10.69□□□□□ -0.7
SEC61A1-207ENST00000498837 Q56UQ5 140 aa10.69□□□□□ -0.7
SEC61A1-207ENST00000498837 ZNF818PQ6ZRF7 136 aa10.69□□□□□ -0.7
SEC61A1-207ENST00000498837 TMEM116Q8NCL8 245 aa10.69□□□□□ -0.7
SEC61A1-207ENST00000498837 OR1L8Q8NGR8 309 aa10.69□□□□□ -0.7
SEC61A1-207ENST00000498837 ATP6V0BQ99437 205 aa10.69□□□□□ -0.7
SEC61A1-207ENST00000498837 HINT2Q9BX68 163 aa10.69□□□□□ -0.7
SEC61A1-207ENST00000498837 PLEKHA2Q9HB19 425 aa10.69□□□□□ -0.7
SEC61A1-207ENST00000498837 NDUFA4L2Q9NRX3 87 aa10.69□□□□□ -0.7
SEC61A1-207ENST00000498837 A0A1B0GVY2 172 aa10.68□□□□□ -0.7
SEC61A1-207ENST00000498837 CA1P00915 261 aaPredicted RBP10.68□□□□□ -0.7
SEC61A1-207ENST00000498837 FCER2P06734 321 aa10.68□□□□□ -0.7
SEC61A1-207ENST00000498837 FGF2P09038 288 aa10.68□□□□□ -0.7
SEC61A1-207ENST00000498837 TBCEQ15813 527 aaPredicted RBP10.68□□□□□ -0.7
SEC61A1-207ENST00000498837 FAM90A2PQ658T7 463 aa10.68□□□□□ -0.7
SEC61A1-207ENST00000498837 THOC7Q6I9Y2 204 aaKnown RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms