RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 ZNF355PQ9NSJ1 428 aa12.1□□□□□ -0.47
CPNE1-228ENST00000498814 COA4Q9NYJ1 87 aa12.1□□□□□ -0.47
CPNE1-228ENST00000498814 ZNF257Q9Y2Q1 563 aa12.1□□□□□ -0.47
CPNE1-228ENST00000498814 A0A0B4J293 547 aa12.09□□□□□ -0.47
CPNE1-228ENST00000498814 IGLC7A0M8Q6 106 aa12.09□□□□□ -0.47
CPNE1-228ENST00000498814 DBX1A6NMT0 343 aa12.09□□□□□ -0.47
CPNE1-228ENST00000498814 TRGV3P03979 118 aa12.09□□□□□ -0.47
CPNE1-228ENST00000498814 CRYGCP07315 174 aa12.09□□□□□ -0.47
CPNE1-228ENST00000498814 AREGP15514 252 aa12.09□□□□□ -0.47
CPNE1-228ENST00000498814 PSMB6P28072 239 aa12.09□□□□□ -0.47
CPNE1-228ENST00000498814 RUNX1Q01196 453 aa12.09□□□□□ -0.47
CPNE1-228ENST00000498814 ASAH1Q13510 395 aa12.09□□□□□ -0.47
CPNE1-228ENST00000498814 IZUMO4Q1ZYL8 232 aa12.09□□□□□ -0.47
CPNE1-228ENST00000498814 C8orf86Q6ZUL3 223 aa12.09□□□□□ -0.47
CPNE1-228ENST00000498814 HSD17B13Q7Z5P4 300 aaPredicted RBP12.09□□□□□ -0.47
CPNE1-228ENST00000498814 ZNF429Q86V71 674 aa12.09□□□□□ -0.47
CPNE1-228ENST00000498814 LSM10Q969L4 123 aaKnown RBP12.09□□□□□ -0.47
CPNE1-228ENST00000498814 GNB4Q9HAV0 340 aa12.09□□□□□ -0.47
CPNE1-228ENST00000498814 TBC1D24Q9ULP9 559 aa12.09□□□□□ -0.47
CPNE1-228ENST00000498814 FLVCR2Q9UPI3 526 aa12.09□□□□□ -0.47
CPNE1-228ENST00000498814 PIGBOS1A0A0B4J2F0 54 aa12.08□□□□□ -0.48
CPNE1-228ENST00000498814 A0A0G2JRQ6 117 aa12.08□□□□□ -0.48
CPNE1-228ENST00000498814 SFT2D2O95562 160 aa12.08□□□□□ -0.48
CPNE1-228ENST00000498814 CTRB1P17538 263 aa12.08□□□□□ -0.48
CPNE1-228ENST00000498814 VAMP1P23763 118 aa12.08□□□□□ -0.48
CPNE1-228ENST00000498814 HSPE1P61604 102 aaKnown RBP12.08□□□□□ -0.48
CPNE1-228ENST00000498814 PPP1R1AQ13522 171 aa12.08□□□□□ -0.48
CPNE1-228ENST00000498814 KLK9Q2XQG4 91 aa12.08□□□□□ -0.48
CPNE1-228ENST00000498814 CTRB2Q6GPI1 263 aa12.08□□□□□ -0.48
CPNE1-228ENST00000498814 LGI3Q8N145 548 aa12.08□□□□□ -0.48
CPNE1-228ENST00000498814 OR10W1Q8NGF6 305 aa12.08□□□□□ -0.48
CPNE1-228ENST00000498814 RNASE11Q8TAA1 199 aaKnown RBP12.08□□□□□ -0.48
CPNE1-228ENST00000498814 PRR13Q9NZ81 148 aa12.08□□□□□ -0.48
CPNE1-228ENST00000498814 KLK9Q9UKQ9 250 aa12.08□□□□□ -0.48
CPNE1-228ENST00000498814 TRBV9A0A0B4J1U6 114 aa12.07□□□□□ -0.48
CPNE1-228ENST00000498814 A0A0B4J2A0 478 aa12.07□□□□□ -0.48
CPNE1-228ENST00000498814 A0A0G2JLM5 398 aa12.07□□□□□ -0.48
CPNE1-228ENST00000498814 I3L521 148 aa12.07□□□□□ -0.48
CPNE1-228ENST00000498814 RBMXL2O75526 392 aaKnown RBP12.07□□□□□ -0.48
CPNE1-228ENST00000498814 DHFRP00374 187 aa12.07□□□□□ -0.48
CPNE1-228ENST00000498814 TCRBP04435 133 aa12.07□□□□□ -0.48
CPNE1-228ENST00000498814 MYCNOSP40205 109 aa12.07□□□□□ -0.48
CPNE1-228ENST00000498814 IFITM3Q01628 133 aa12.07□□□□□ -0.48
CPNE1-228ENST00000498814 WT1-ASQ06250 92 aa12.07□□□□□ -0.48
CPNE1-228ENST00000498814 MZT2BQ6NZ67 158 aa12.07□□□□□ -0.48
CPNE1-228ENST00000498814 ETV3LQ6ZN32 361 aa12.07□□□□□ -0.48
CPNE1-228ENST00000498814 SLC35G3Q8N808 338 aa12.07□□□□□ -0.48
CPNE1-228ENST00000498814 LRTM2Q8N967 370 aa12.07□□□□□ -0.48
CPNE1-228ENST00000498814 RAX2Q96IS3 184 aa12.07□□□□□ -0.48
CPNE1-228ENST00000498814 USMG5Q96IX5 58 aa12.07□□□□□ -0.48
CPNE1-228ENST00000498814 HINT2Q9BX68 163 aa12.07□□□□□ -0.48
CPNE1-228ENST00000498814 SHPKQ9UHJ6 478 aa12.07□□□□□ -0.48
CPNE1-228ENST00000498814 DUXBA0A1W2PPF3 345 aa12.06□□□□□ -0.48
CPNE1-228ENST00000498814 FAM223BA6NKX1 122 aa12.06□□□□□ -0.48
CPNE1-228ENST00000498814 CCL24O00175 119 aa12.06□□□□□ -0.48
CPNE1-228ENST00000498814 PF4P02776 101 aa12.06□□□□□ -0.48
CPNE1-228ENST00000498814 PRH1P02810 166 aa12.06□□□□□ -0.48
CPNE1-228ENST00000498814 LGALS1P09382 135 aaKnown RBP12.06□□□□□ -0.48
CPNE1-228ENST00000498814 OR13C7P0DN81 318 aa12.06□□□□□ -0.48
CPNE1-228ENST00000498814 PRCDQ00LT1 54 aa12.06□□□□□ -0.48
CPNE1-228ENST00000498814 AARDQ4LEZ3 155 aa12.06□□□□□ -0.48
CPNE1-228ENST00000498814 Q6ZRM9 215 aa12.06□□□□□ -0.48
CPNE1-228ENST00000498814 FAM223AQ8IWN6 122 aa12.06□□□□□ -0.48
CPNE1-228ENST00000498814 NECAP1Q8NC96 275 aa12.06□□□□□ -0.48
CPNE1-228ENST00000498814 GPR146Q96CH1 333 aa12.06□□□□□ -0.48
CPNE1-228ENST00000498814 P2RX4Q99571 388 aa12.06□□□□□ -0.48
CPNE1-228ENST00000498814 ALX4Q9H161 411 aaPredicted RBP12.06□□□□□ -0.48
CPNE1-228ENST00000498814 C20orf85Q9H1P6 137 aa12.06□□□□□ -0.48
CPNE1-228ENST00000498814 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.06□□□□□ -0.48
CPNE1-228ENST00000498814 CMYA5Q8N3K9 4069 aa12.05□□□□□ -0.48
CPNE1-228ENST00000498814 C13orf42A0A1B0GVH6 325 aa12.05□□□□□ -0.48
CPNE1-228ENST00000498814 FAM240BA0A1B0GVZ2 78 aa12.05□□□□□ -0.48
CPNE1-228ENST00000498814 C9orf170A2RU37 121 aa12.05□□□□□ -0.48
CPNE1-228ENST00000498814 ST8SIA3O43173 380 aa12.05□□□□□ -0.48
CPNE1-228ENST00000498814 REG1AP05451 166 aa12.05□□□□□ -0.48
CPNE1-228ENST00000498814 OR4E1P0C645 316 aa12.05□□□□□ -0.48
CPNE1-228ENST00000498814 HIST1H1BP16401 226 aaKnown RBP12.05□□□□□ -0.48
CPNE1-228ENST00000498814 ANXA7P20073 488 aaKnown RBP12.05□□□□□ -0.48
CPNE1-228ENST00000498814 RAB25P57735 213 aa12.05□□□□□ -0.48
CPNE1-228ENST00000498814 RHOGP84095 191 aa12.05□□□□□ -0.48
CPNE1-228ENST00000498814 DEFB136Q30KP8 78 aa12.05□□□□□ -0.48
CPNE1-228ENST00000498814 ANKRD55Q3KP44 614 aa12.05□□□□□ -0.48
CPNE1-228ENST00000498814 NMSQ5H8A3 153 aa12.05□□□□□ -0.48
CPNE1-228ENST00000498814 C19orf35Q6ZS72 473 aa12.05□□□□□ -0.48
CPNE1-228ENST00000498814 LYZL2Q7Z4W2 148 aa12.05□□□□□ -0.48
CPNE1-228ENST00000498814 MRPL41Q8IXM3 137 aaKnown RBP12.05□□□□□ -0.48
CPNE1-228ENST00000498814 FANCD2OSQ96PS1 177 aa12.05□□□□□ -0.48
CPNE1-228ENST00000498814 OR5B12Q96R08 314 aa12.05□□□□□ -0.48
CPNE1-228ENST00000498814 NBEAL1Q6ZS30 2694 aa12.05□□□□□ -0.48
CPNE1-228ENST00000498814 IGHV3-11P01762 117 aa12.04□□□□□ -0.48
CPNE1-228ENST00000498814 HLA-AP01891 365 aaKnown RBP12.04□□□□□ -0.48
CPNE1-228ENST00000498814 DEFA4P12838 97 aa12.04□□□□□ -0.48
CPNE1-228ENST00000498814 MECP2P51608 486 aaKnown RBP12.04□□□□□ -0.48
CPNE1-228ENST00000498814 DHRS2Q13268 280 aa12.04□□□□□ -0.48
CPNE1-228ENST00000498814 FHL3Q13643 280 aa12.04□□□□□ -0.48
CPNE1-228ENST00000498814 LYG2Q86SG7 212 aa12.04□□□□□ -0.48
CPNE1-228ENST00000498814 LINC00482Q8N8I6 264 aa12.04□□□□□ -0.48
CPNE1-228ENST00000498814 WFDC9Q8NEX5 89 aa12.04□□□□□ -0.48
CPNE1-228ENST00000498814 OR11H1Q8NG94 326 aa12.04□□□□□ -0.48
CPNE1-228ENST00000498814 OR1N2Q8NGR9 330 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms