RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 SECTM1Q8WVN6 248 aa10.77□□□□□ -0.69
TRAF4-212ENST00000498540 QTRT1Q9BXR0 403 aaKnown RBP10.77□□□□□ -0.69
TRAF4-212ENST00000498540 COMMD5Q9GZQ3 224 aa10.77□□□□□ -0.69
TRAF4-212ENST00000498540 CCDC90BQ9GZT6 254 aa10.77□□□□□ -0.69
TRAF4-212ENST00000498540 C6orf62Q9GZU0 229 aaPredicted RBP10.77□□□□□ -0.69
TRAF4-212ENST00000498540 TPRKBQ9Y3C4 175 aa10.77□□□□□ -0.69
TRAF4-212ENST00000498540 SULT1C2O00338 296 aa10.76□□□□□ -0.69
TRAF4-212ENST00000498540 PTHLHP12272 177 aa10.76□□□□□ -0.69
TRAF4-212ENST00000498540 MYL9P24844 172 aa10.76□□□□□ -0.69
TRAF4-212ENST00000498540 ADMP35318 185 aa10.76□□□□□ -0.69
TRAF4-212ENST00000498540 TFPI2P48307 235 aa10.76□□□□□ -0.69
TRAF4-212ENST00000498540 MFAP2P55001 183 aa10.76□□□□□ -0.69
TRAF4-212ENST00000498540 TAS2R31P59538 309 aa10.76□□□□□ -0.69
TRAF4-212ENST00000498540 WT1-ASQ06250 92 aa10.76□□□□□ -0.69
TRAF4-212ENST00000498540 POU2AF1Q16633 256 aa10.76□□□□□ -0.69
TRAF4-212ENST00000498540 ZNF773Q6PK81 442 aa10.76□□□□□ -0.69
TRAF4-212ENST00000498540 OR13F1Q8NGS4 319 aa10.76□□□□□ -0.69
TRAF4-212ENST00000498540 ZNF414Q96IQ9 312 aa10.76□□□□□ -0.69
TRAF4-212ENST00000498540 RNF2Q99496 336 aa10.76□□□□□ -0.69
TRAF4-212ENST00000498540 SRSF8Q9BRL6 282 aaKnown RBP10.76□□□□□ -0.69
TRAF4-212ENST00000498540 TMEM140Q9NV12 185 aa10.76□□□□□ -0.69
TRAF4-212ENST00000498540 RYR1P21817 5038 aa10.75□□□□□ -0.69
TRAF4-212ENST00000498540 K7EMT4 169 aa10.75□□□□□ -0.69
TRAF4-212ENST00000498540 RBFOX2O43251 390 aaKnown RBP eCLIP10.75□□□□□ -0.691e-6■□□□□ 9.7
TRAF4-212ENST00000498540 SERPINE2P07093 398 aa10.75□□□□□ -0.69
TRAF4-212ENST00000498540 OR13C7P0DN81 318 aa10.75□□□□□ -0.69
TRAF4-212ENST00000498540 GNG2P59768 71 aa10.75□□□□□ -0.69
TRAF4-212ENST00000498540 SLC25A24Q6NUK1 477 aa10.75□□□□□ -0.69
TRAF4-212ENST00000498540 SPSB3Q6PJ21 355 aa10.75□□□□□ -0.69
TRAF4-212ENST00000498540 AIFM2Q9BRQ8 373 aa10.75□□□□□ -0.69
TRAF4-212ENST00000498540 VCXQ9H320 206 aa10.75□□□□□ -0.69
TRAF4-212ENST00000498540 C21orf62Q9NYP8 219 aa10.75□□□□□ -0.69
TRAF4-212ENST00000498540 SMPXQ9UHP9 88 aa10.75□□□□□ -0.69
TRAF4-212ENST00000498540 APLNQ9ULZ1 77 aa10.75□□□□□ -0.69
TRAF4-212ENST00000498540 ETV7Q9Y603 341 aa10.75□□□□□ -0.69
TRAF4-212ENST00000498540 IGKV3-7A0A075B6H7 116 aa10.74□□□□□ -0.69
TRAF4-212ENST00000498540 IGHV3-49A0A0A0MS15 119 aa10.74□□□□□ -0.69
TRAF4-212ENST00000498540 C15orf62A8K5M9 175 aa10.74□□□□□ -0.69
TRAF4-212ENST00000498540 IGLL5B9A064 214 aa10.74□□□□□ -0.69
TRAF4-212ENST00000498540 EBAG9O00559 213 aa10.74□□□□□ -0.69
TRAF4-212ENST00000498540 HPRT1P00492 218 aa10.74□□□□□ -0.69
TRAF4-212ENST00000498540 NQO2P16083 231 aa10.74□□□□□ -0.69
TRAF4-212ENST00000498540 FCGR2CP31995 323 aa10.74□□□□□ -0.69
TRAF4-212ENST00000498540 TCTAP57738 103 aa10.74□□□□□ -0.69
TRAF4-212ENST00000498540 MSMO1Q15800 293 aa10.74□□□□□ -0.69
TRAF4-212ENST00000498540 PRSS48Q7RTY5 328 aa10.74□□□□□ -0.69
TRAF4-212ENST00000498540 UBAC2Q8NBM4 344 aa10.74□□□□□ -0.69
TRAF4-212ENST00000498540 SCARB1Q8WTV0 552 aa10.74□□□□□ -0.69
TRAF4-212ENST00000498540 K7EIM0 57 aa10.73□□□□□ -0.69
TRAF4-212ENST00000498540 CHEK1O14757 476 aa10.73□□□□□ -0.69
TRAF4-212ENST00000498540 CYB5BO43169 146 aa10.73□□□□□ -0.69
TRAF4-212ENST00000498540 CA1P00915 261 aaPredicted RBP10.73□□□□□ -0.69
TRAF4-212ENST00000498540 PPYP01298 95 aa10.73□□□□□ -0.69
TRAF4-212ENST00000498540 FGF2P09038 288 aa10.73□□□□□ -0.69
TRAF4-212ENST00000498540 TRAPPC2P0DI81 140 aa10.73□□□□□ -0.69
TRAF4-212ENST00000498540 TRAPPC2BP0DI82 140 aa10.73□□□□□ -0.69
TRAF4-212ENST00000498540 AQP4P55087 323 aa10.73□□□□□ -0.69
TRAF4-212ENST00000498540 C22orf42Q6IC83 251 aa10.73□□□□□ -0.69
TRAF4-212ENST00000498540 DMBX1Q8NFW5 382 aa10.73□□□□□ -0.69
TRAF4-212ENST00000498540 OR51H1Q8NH63 302 aa10.73□□□□□ -0.69
TRAF4-212ENST00000498540 RHPN1-AS1Q9BWJ2 59 aa10.73□□□□□ -0.69
TRAF4-212ENST00000498540 SLC5A7Q9GZV3 580 aa10.73□□□□□ -0.69
TRAF4-212ENST00000498540 NDUFB11Q9NX14 153 aa10.73□□□□□ -0.69
TRAF4-212ENST00000498540 F11RQ9Y624 299 aaKnown RBP10.73□□□□□ -0.69
TRAF4-212ENST00000498540 PKHD1P08F94 4074 aa10.73□□□□□ -0.69
TRAF4-212ENST00000498540 IGHV7-4-1A0A0J9YVY3 117 aa10.72□□□□□ -0.69
TRAF4-212ENST00000498540 TEX50A0A1B0GTY4 177 aa10.72□□□□□ -0.69
TRAF4-212ENST00000498540 A0A1B0GVY2 172 aa10.72□□□□□ -0.69
TRAF4-212ENST00000498540 TRDV1A0A1B0GX56 115 aa10.72□□□□□ -0.69
TRAF4-212ENST00000498540 XRCC3O43542 346 aa10.72□□□□□ -0.69
TRAF4-212ENST00000498540 ARPC4P59998 168 aa10.72□□□□□ -0.69
TRAF4-212ENST00000498540 CATR1Q13166 79 aa10.72□□□□□ -0.69
TRAF4-212ENST00000498540 TBCEQ15813 527 aaPredicted RBP10.72□□□□□ -0.69
TRAF4-212ENST00000498540 Q56UQ5 140 aa10.72□□□□□ -0.69
TRAF4-212ENST00000498540 THOC7Q6I9Y2 204 aaKnown RBP10.72□□□□□ -0.69
TRAF4-212ENST00000498540 ZNF818PQ6ZRF7 136 aa10.72□□□□□ -0.69
TRAF4-212ENST00000498540 GBGT1Q8N5D6 347 aa10.72□□□□□ -0.69
TRAF4-212ENST00000498540 GVQW1Q8N7I0 195 aa10.72□□□□□ -0.69
TRAF4-212ENST00000498540 TMEM116Q8NCL8 245 aa10.72□□□□□ -0.69
TRAF4-212ENST00000498540 ZBTB34Q8NCN2 500 aa10.72□□□□□ -0.69
TRAF4-212ENST00000498540 BEST4Q8NFU0 473 aa10.72□□□□□ -0.69
TRAF4-212ENST00000498540 ATP6V0BQ99437 205 aa10.72□□□□□ -0.69
TRAF4-212ENST00000498540 FAT2Q9NYQ8 4349 aa10.71□□□□□ -0.69
TRAF4-212ENST00000498540 IGHV3OR16-13A0A075B7E8 117 aa10.71□□□□□ -0.69
TRAF4-212ENST00000498540 IGHV3-74A0A0B4J1X5 117 aa10.71□□□□□ -0.69
TRAF4-212ENST00000498540 CTSGP08311 255 aa10.71□□□□□ -0.69
TRAF4-212ENST00000498540 FXYD4P59646 89 aa10.71□□□□□ -0.69
TRAF4-212ENST00000498540 FAM90A2PQ658T7 463 aa10.71□□□□□ -0.69
TRAF4-212ENST00000498540 ZNF367Q7RTV3 350 aa10.71□□□□□ -0.69
TRAF4-212ENST00000498540 HSD17B13Q7Z5P4 300 aaPredicted RBP10.71□□□□□ -0.69
TRAF4-212ENST00000498540 OR1L8Q8NGR8 309 aa10.71□□□□□ -0.69
TRAF4-212ENST00000498540 LGALS14Q8TCE9 139 aa10.71□□□□□ -0.69
TRAF4-212ENST00000498540 LSM10Q969L4 123 aaKnown RBP10.71□□□□□ -0.69
TRAF4-212ENST00000498540 HINT2Q9BX68 163 aa10.71□□□□□ -0.69
TRAF4-212ENST00000498540 PLEKHA2Q9HB19 425 aa10.71□□□□□ -0.69
TRAF4-212ENST00000498540 NDUFA4L2Q9NRX3 87 aa10.71□□□□□ -0.69
TRAF4-212ENST00000498540 NOTOA8MTQ0 251 aa10.7□□□□□ -0.7
TRAF4-212ENST00000498540 MRPS14O60783 128 aaKnown RBP10.7□□□□□ -0.7
TRAF4-212ENST00000498540 FCER2P06734 321 aa10.7□□□□□ -0.7
TRAF4-212ENST00000498540 CMC4P56277 68 aaPredicted RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms