RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 PRNDQ9UKY0 176 aa9.85□□□□□ -0.83
HSPG2-213ENST00000498495 C14orf166Q9Y224 244 aaKnown RBP9.85□□□□□ -0.83
HSPG2-213ENST00000498495 OR51B2Q9Y5P1 312 aa9.85□□□□□ -0.83
HSPG2-213ENST00000498495 H0Y980 276 aa9.84□□□□□ -0.83
HSPG2-213ENST00000498495 SAP30O75446 220 aa9.84□□□□□ -0.83
HSPG2-213ENST00000498495 ATG12O94817 140 aa9.84□□□□□ -0.83
HSPG2-213ENST00000498495 IGKV1-39P01597 117 aa9.84□□□□□ -0.83
HSPG2-213ENST00000498495 IGKV1D-39P04432 117 aa9.84□□□□□ -0.83
HSPG2-213ENST00000498495 EXOSC2Q13868 293 aaKnown RBP9.84□□□□□ -0.83
HSPG2-213ENST00000498495 SURF2Q15527 256 aaPredicted RBP9.84□□□□□ -0.83
HSPG2-213ENST00000498495 C15orf32Q32M92 178 aa9.84□□□□□ -0.83
HSPG2-213ENST00000498495 SP6Q3SY56 376 aa9.84□□□□□ -0.83
HSPG2-213ENST00000498495 FAM209BQ5JX69 171 aa9.84□□□□□ -0.83
HSPG2-213ENST00000498495 C19orf35Q6ZS72 473 aa9.84□□□□□ -0.83
HSPG2-213ENST00000498495 HSD17B13Q7Z5P4 300 aaPredicted RBP9.84□□□□□ -0.83
HSPG2-213ENST00000498495 OR10W1Q8NGF6 305 aa9.84□□□□□ -0.83
HSPG2-213ENST00000498495 OR51S1Q8NGJ8 323 aa9.84□□□□□ -0.83
HSPG2-213ENST00000498495 MRGPRFQ96AM1 343 aa9.84□□□□□ -0.83
HSPG2-213ENST00000498495 SEC22AQ96IW7 307 aa9.84□□□□□ -0.83
HSPG2-213ENST00000498495 SCGB3A2Q96PL1 93 aa9.84□□□□□ -0.83
HSPG2-213ENST00000498495 FANCD2OSQ96PS1 177 aa9.84□□□□□ -0.83
HSPG2-213ENST00000498495 ELOVL1Q9BW60 279 aa9.84□□□□□ -0.83
HSPG2-213ENST00000498495 MCUBQ9NWR8 336 aa9.84□□□□□ -0.83
HSPG2-213ENST00000498495 GPR132Q9UNW8 380 aa9.84□□□□□ -0.83
HSPG2-213ENST00000498495 TEX13DA0A0J9YY54 714 aaPredicted RBP9.83□□□□□ -0.84
HSPG2-213ENST00000498495 WI2-2373I1.2A0A1W2PRP0 233 aa9.83□□□□□ -0.84
HSPG2-213ENST00000498495 IGLC7A0M8Q6 106 aa9.83□□□□□ -0.84
HSPG2-213ENST00000498495 CYB5BO43169 146 aa9.83□□□□□ -0.84
HSPG2-213ENST00000498495 NDUFB8O95169 186 aa9.83□□□□□ -0.84
HSPG2-213ENST00000498495 TRBV12-3P01733 135 aa9.83□□□□□ -0.84
HSPG2-213ENST00000498495 OR13C7P0DN81 318 aa9.83□□□□□ -0.84
HSPG2-213ENST00000498495 KLF5Q13887 457 aaPredicted RBP9.83□□□□□ -0.84
HSPG2-213ENST00000498495 RPEL1Q2QD12 228 aa9.83□□□□□ -0.84
HSPG2-213ENST00000498495 TRIM16LQ309B1 348 aa9.83□□□□□ -0.84
HSPG2-213ENST00000498495 ACSM6Q6P461 480 aa9.83□□□□□ -0.84
HSPG2-213ENST00000498495 CCDC190Q86UF4 302 aa9.83□□□□□ -0.84
HSPG2-213ENST00000498495 Q8N402 240 aa9.83□□□□□ -0.84
HSPG2-213ENST00000498495 TOMM5Q8N4H5 51 aa9.83□□□□□ -0.84
HSPG2-213ENST00000498495 OR5B3Q8NH48 314 aa9.83□□□□□ -0.84
HSPG2-213ENST00000498495 TMEM56Q96MV1 263 aa9.83□□□□□ -0.84
HSPG2-213ENST00000498495 TP53RKQ96S44 253 aa9.83□□□□□ -0.84
HSPG2-213ENST00000498495 RTBDNQ9BSG5 229 aaPredicted RBP9.83□□□□□ -0.84
HSPG2-213ENST00000498495 NDUFA4L2Q9NRX3 87 aa9.83□□□□□ -0.84
HSPG2-213ENST00000498495 THYN1Q9P016 225 aa9.83□□□□□ -0.84
HSPG2-213ENST00000498495 V9GYH0 126 aa9.83□□□□□ -0.84
HSPG2-213ENST00000498495 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.82□□□□□ -0.84
HSPG2-213ENST00000498495 K7EIL1 84 aa9.82□□□□□ -0.84
HSPG2-213ENST00000498495 B3GALNT1O75752 331 aa9.82□□□□□ -0.84
HSPG2-213ENST00000498495 FAUP35544 74 aaKnown RBP9.82□□□□□ -0.84
HSPG2-213ENST00000498495 MECP2P51608 486 aaKnown RBP9.82□□□□□ -0.84
HSPG2-213ENST00000498495 AKR1C2P52895 323 aa9.82□□□□□ -0.84
HSPG2-213ENST00000498495 AP3S2P59780 193 aa9.82□□□□□ -0.84
HSPG2-213ENST00000498495 KLK9Q2XQG4 91 aa9.82□□□□□ -0.84
HSPG2-213ENST00000498495 SPANXN2Q5MJ10 180 aa9.82□□□□□ -0.84
HSPG2-213ENST00000498495 SLC25A24Q6NUK1 477 aa9.82□□□□□ -0.84
HSPG2-213ENST00000498495 GDPD1Q8N9F7 314 aa9.82□□□□□ -0.84
HSPG2-213ENST00000498495 LSM10Q969L4 123 aaKnown RBP9.82□□□□□ -0.84
HSPG2-213ENST00000498495 EEF1AKMT3Q96AZ1 226 aa9.82□□□□□ -0.84
HSPG2-213ENST00000498495 C5orf66Q9H5L9 145 aa9.82□□□□□ -0.84
HSPG2-213ENST00000498495 TMEM14BQ9NUH8 114 aa9.82□□□□□ -0.84
HSPG2-213ENST00000498495 SLC2A8Q9NY64 477 aa9.82□□□□□ -0.84
HSPG2-213ENST00000498495 KLK9Q9UKQ9 250 aa9.82□□□□□ -0.84
HSPG2-213ENST00000498495 MEGF8Q7Z7M0 2845 aa9.82□□□□□ -0.84
HSPG2-213ENST00000498495 IGLV11-55A0A075B6I3 123 aa9.81□□□□□ -0.84
HSPG2-213ENST00000498495 C15orf61A6NNL5 157 aa9.81□□□□□ -0.84
HSPG2-213ENST00000498495 IGHV3-23P01764 117 aa9.81□□□□□ -0.84
HSPG2-213ENST00000498495 OR5AC1P0C628 307 aa9.81□□□□□ -0.84
HSPG2-213ENST00000498495 UCP1P25874 307 aa9.81□□□□□ -0.84
HSPG2-213ENST00000498495 ETV6P41212 452 aa9.81□□□□□ -0.84
HSPG2-213ENST00000498495 SYNJ2BPP57105 145 aa9.81□□□□□ -0.84
HSPG2-213ENST00000498495 HSPE1P61604 102 aaKnown RBP9.81□□□□□ -0.84
HSPG2-213ENST00000498495 WT1-ASQ06250 92 aa9.81□□□□□ -0.84
HSPG2-213ENST00000498495 OR9G4Q8NGQ1 327 aa9.81□□□□□ -0.84
HSPG2-213ENST00000498495 OR6Q1Q8NGQ2 317 aa9.81□□□□□ -0.84
HSPG2-213ENST00000498495 RRNAD1Q96FB5 475 aaKnown RBP9.81□□□□□ -0.84
HSPG2-213ENST00000498495 CXorf58Q96LI9 332 aa9.81□□□□□ -0.84
HSPG2-213ENST00000498495 NAA60Q9H7X0 242 aa9.81□□□□□ -0.84
HSPG2-213ENST00000498495 KCNIP3Q9Y2W7 256 aa9.81□□□□□ -0.84
HSPG2-213ENST00000498495 S4R3C0 116 aa9.81□□□□□ -0.84
HSPG2-213ENST00000498495 NOTCH1P46531 2555 aa9.8□□□□□ -0.84
HSPG2-213ENST00000498495 TRBV7-1A0A0A6YYK4 115 aa9.8□□□□□ -0.84
HSPG2-213ENST00000498495 DBX1A6NMT0 343 aa9.8□□□□□ -0.84
HSPG2-213ENST00000498495 GGCTO75223 188 aaKnown RBP9.8□□□□□ -0.84
HSPG2-213ENST00000498495 DHODHQ02127 395 aa9.8□□□□□ -0.84
HSPG2-213ENST00000498495 KLF9Q13886 244 aaPredicted RBP9.8□□□□□ -0.84
HSPG2-213ENST00000498495 ZNF79Q15937 498 aa9.8□□□□□ -0.84
HSPG2-213ENST00000498495 CLEC19AQ6UXS0 136 aa9.8□□□□□ -0.84
HSPG2-213ENST00000498495 SGPP2Q8IWX5 399 aa9.8□□□□□ -0.84
HSPG2-213ENST00000498495 OR1L6Q8NGR2 347 aa9.8□□□□□ -0.84
HSPG2-213ENST00000498495 RNASE11Q8TAA1 199 aaKnown RBP9.8□□□□□ -0.84
HSPG2-213ENST00000498495 GLYATL2Q8WU03 294 aa9.8□□□□□ -0.84
HSPG2-213ENST00000498495 TMEM222Q9H0R3 208 aa9.8□□□□□ -0.84
HSPG2-213ENST00000498495 ZNF256Q9Y2P7 627 aaPredicted RBP9.8□□□□□ -0.84
HSPG2-213ENST00000498495 CRYM-AS1A6NIL9 109 aa9.79□□□□□ -0.84
HSPG2-213ENST00000498495 PPP5D1E7EU14 171 aa9.79□□□□□ -0.84
HSPG2-213ENST00000498495 BMPR1BO00238 502 aa9.79□□□□□ -0.84
HSPG2-213ENST00000498495 OR2C1O95371 312 aa9.79□□□□□ -0.84
HSPG2-213ENST00000498495 CDS2O95674 445 aa9.79□□□□□ -0.84
HSPG2-213ENST00000498495 LY86O95711 162 aa9.79□□□□□ -0.84
HSPG2-213ENST00000498495 IGKV1-5P01602 117 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms