RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 C22orf15Q8WYQ4 148 aa4.56□□□□□ -1.68
TMEM39A-212ENST00000497993 C11orf52Q96A22 123 aa4.56□□□□□ -1.68
TMEM39A-212ENST00000497993 DERL3Q96Q80 235 aa4.56□□□□□ -1.68
TMEM39A-212ENST00000497993 CHIAQ9BZP6 476 aa4.56□□□□□ -1.68
TMEM39A-212ENST00000497993 MLXQ9UH92 298 aa4.56□□□□□ -1.68
TMEM39A-212ENST00000497993 ING4Q9UNL4 249 aa4.56□□□□□ -1.68
TMEM39A-212ENST00000497993 MEGF8Q7Z7M0 2845 aa4.55□□□□□ -1.68
TMEM39A-212ENST00000497993 IGHV4-4A0A075B6R2 117 aa4.55□□□□□ -1.68
TMEM39A-212ENST00000497993 LOC100131303A0A0U1RQF7 123 aa4.55□□□□□ -1.68
TMEM39A-212ENST00000497993 A0A1B0GWB2 263 aa4.55□□□□□ -1.68
TMEM39A-212ENST00000497993 CLPSL1A2RUU4 121 aa4.55□□□□□ -1.68
TMEM39A-212ENST00000497993 ZNF729A6NN14 1252 aaPredicted RBP4.55□□□□□ -1.68
TMEM39A-212ENST00000497993 OOSP1A8MZH6 123 aa4.55□□□□□ -1.68
TMEM39A-212ENST00000497993 DENRO43583 198 aaKnown RBP4.55□□□□□ -1.68
TMEM39A-212ENST00000497993 OCM2P0CE71 109 aa4.55□□□□□ -1.68
TMEM39A-212ENST00000497993 TGFBR2P37173 567 aa4.55□□□□□ -1.68
TMEM39A-212ENST00000497993 CEACAM3P40198 252 aa4.55□□□□□ -1.68
TMEM39A-212ENST00000497993 RBM11P57052 281 aaKnown RBP4.55□□□□□ -1.68
TMEM39A-212ENST00000497993 KLRD1Q13241 179 aa4.55□□□□□ -1.68
TMEM39A-212ENST00000497993 TPBGQ13641 420 aa4.55□□□□□ -1.68
TMEM39A-212ENST00000497993 LRRC75BQ2VPJ9 315 aa4.55□□□□□ -1.68
TMEM39A-212ENST00000497993 TMEM30BQ3MIR4 351 aa4.55□□□□□ -1.68
TMEM39A-212ENST00000497993 LDLRAD2Q5SZI1 272 aa4.55□□□□□ -1.68
TMEM39A-212ENST00000497993 RSBN1Q5VWQ0 802 aaPredicted RBP4.55□□□□□ -1.68
TMEM39A-212ENST00000497993 CD200R1LQ6Q8B3 271 aa4.55□□□□□ -1.68
TMEM39A-212ENST00000497993 AHSA2Q719I0 299 aa4.55□□□□□ -1.68
TMEM39A-212ENST00000497993 VKORC1L1Q8N0U8 176 aa4.55□□□□□ -1.68
TMEM39A-212ENST00000497993 STPG4Q8N801 248 aa4.55□□□□□ -1.68
TMEM39A-212ENST00000497993 OR4S1Q8NGB4 309 aa4.55□□□□□ -1.68
TMEM39A-212ENST00000497993 OR56B4Q8NH76 319 aa4.55□□□□□ -1.68
TMEM39A-212ENST00000497993 PIFOQ8TCI5 191 aa4.55□□□□□ -1.68
TMEM39A-212ENST00000497993 H1FXQ92522 213 aaKnown RBP4.55□□□□□ -1.68
TMEM39A-212ENST00000497993 GHSRQ92847 366 aa4.55□□□□□ -1.68
TMEM39A-212ENST00000497993 MALSU1Q96EH3 234 aa4.55□□□□□ -1.68
TMEM39A-212ENST00000497993 ZNF714Q96N38 554 aa4.55□□□□□ -1.68
TMEM39A-212ENST00000497993 EXOSC4Q9NPD3 245 aaKnown RBP4.55□□□□□ -1.68
TMEM39A-212ENST00000497993 GLS2Q9UI32 602 aa4.55□□□□□ -1.68
TMEM39A-212ENST00000497993 RAB26Q9ULW5 256 aa4.55□□□□□ -1.68
TMEM39A-212ENST00000497993 SOX21Q9Y651 276 aaPredicted RBP4.55□□□□□ -1.68
TMEM39A-212ENST00000497993 TRAV8-7A0A075B6U6 113 aa4.54□□□□□ -1.68
TMEM39A-212ENST00000497993 IGHV3OR16-10A0A075B7F0 116 aa4.54□□□□□ -1.68
TMEM39A-212ENST00000497993 IGHV2-26A0A0B4J1V2 119 aa4.54□□□□□ -1.68
TMEM39A-212ENST00000497993 ODAMA1E959 279 aa4.54□□□□□ -1.68
TMEM39A-212ENST00000497993 E9PLD3 99 aa4.54□□□□□ -1.68
TMEM39A-212ENST00000497993 LY6LH3BQJ8 138 aa4.54□□□□□ -1.68
TMEM39A-212ENST00000497993 M0QXV9 152 aa4.54□□□□□ -1.68
TMEM39A-212ENST00000497993 MYL12BO14950 172 aa4.54□□□□□ -1.68
TMEM39A-212ENST00000497993 GATCO43716 136 aaKnown RBP4.54□□□□□ -1.68
TMEM39A-212ENST00000497993 ANGPTL7O43827 346 aa4.54□□□□□ -1.68
TMEM39A-212ENST00000497993 CA11O75493 328 aa4.54□□□□□ -1.68
TMEM39A-212ENST00000497993 ATP6V1G2O95670 118 aa4.54□□□□□ -1.68
TMEM39A-212ENST00000497993 HCKP08631 526 aa4.54□□□□□ -1.68
TMEM39A-212ENST00000497993 UCHL1P09936 223 aa4.54□□□□□ -1.68
TMEM39A-212ENST00000497993 CCL3L1P16619 93 aa4.54□□□□□ -1.68
TMEM39A-212ENST00000497993 TBPP20226 339 aa4.54□□□□□ -1.68
TMEM39A-212ENST00000497993 PSMA1P25786 263 aaKnown RBP4.54□□□□□ -1.68
TMEM39A-212ENST00000497993 ZNF93P35789 620 aaPredicted RBP4.54□□□□□ -1.68
TMEM39A-212ENST00000497993 ZNF137PP52743 207 aa4.54□□□□□ -1.68
TMEM39A-212ENST00000497993 OR2B8PP59922 312 aa4.54□□□□□ -1.68
TMEM39A-212ENST00000497993 GABARAPL2P60520 117 aa4.54□□□□□ -1.68
TMEM39A-212ENST00000497993 PPP3R1P63098 170 aa4.54□□□□□ -1.68
TMEM39A-212ENST00000497993 QRFPP83859 136 aa4.54□□□□□ -1.68
TMEM39A-212ENST00000497993 MLLT11Q13015 90 aaPredicted RBP4.54□□□□□ -1.68
TMEM39A-212ENST00000497993 UNC119Q13432 240 aa4.54□□□□□ -1.68
TMEM39A-212ENST00000497993 ARL6IP1Q15041 203 aa4.54□□□□□ -1.68
TMEM39A-212ENST00000497993 TRAM1Q15629 374 aa4.54□□□□□ -1.68
TMEM39A-212ENST00000497993 TWIST1Q15672 202 aa4.54□□□□□ -1.68
TMEM39A-212ENST00000497993 GRK1Q15835 563 aa4.54□□□□□ -1.68
TMEM39A-212ENST00000497993 TAL2Q16559 108 aa4.54□□□□□ -1.68
TMEM39A-212ENST00000497993 C17orf58Q2M2W7 97 aa4.54□□□□□ -1.68
TMEM39A-212ENST00000497993 C1orf100Q5SVJ3 147 aa4.54□□□□□ -1.68
TMEM39A-212ENST00000497993 IDNKQ5T6J7 187 aa4.54□□□□□ -1.68
TMEM39A-212ENST00000497993 OLFML2AQ68BL7 652 aa4.54□□□□□ -1.68
TMEM39A-212ENST00000497993 SLC35E4Q6ICL7 350 aa4.54□□□□□ -1.68
TMEM39A-212ENST00000497993 C11orf87Q6NUJ2 197 aa4.54□□□□□ -1.68
TMEM39A-212ENST00000497993 TMEM91Q6ZNR0 172 aa4.54□□□□□ -1.68
TMEM39A-212ENST00000497993 ABHD12Q8N2K0 398 aa4.54□□□□□ -1.68
TMEM39A-212ENST00000497993 LINC00311Q8N616 119 aa4.54□□□□□ -1.68
TMEM39A-212ENST00000497993 DUSP18Q8NEJ0 188 aa4.54□□□□□ -1.68
TMEM39A-212ENST00000497993 OR4P4Q8NGL7 312 aa4.54□□□□□ -1.68
TMEM39A-212ENST00000497993 OR13D1Q8NGV5 346 aa4.54□□□□□ -1.68
TMEM39A-212ENST00000497993 LINC01006Q8NI28 216 aa4.54□□□□□ -1.68
TMEM39A-212ENST00000497993 CREB3L1Q96BA8 519 aa4.54□□□□□ -1.68
TMEM39A-212ENST00000497993 SPACA5Q96QH8 159 aa4.54□□□□□ -1.68
TMEM39A-212ENST00000497993 OR5M11Q96RB7 305 aa4.54□□□□□ -1.68
TMEM39A-212ENST00000497993 MND1Q9BWT6 205 aa4.54□□□□□ -1.68
TMEM39A-212ENST00000497993 MMP28Q9H239 520 aa4.54□□□□□ -1.68
TMEM39A-212ENST00000497993 TMEM133Q9H2Q1 129 aa4.54□□□□□ -1.68
TMEM39A-212ENST00000497993 RHBDL2Q9NX52 303 aa4.54□□□□□ -1.68
TMEM39A-212ENST00000497993 TAS2R4Q9NYW5 299 aa4.54□□□□□ -1.68
TMEM39A-212ENST00000497993 ERGIC3Q9Y282 383 aa4.54□□□□□ -1.68
TMEM39A-212ENST00000497993 DNAH3Q8TD57 4116 aa4.53□□□□□ -1.68
TMEM39A-212ENST00000497993 TGP01266 2768 aa4.53□□□□□ -1.68
TMEM39A-212ENST00000497993 TRGV10A0A0A0MS01 117 aa4.53□□□□□ -1.68
TMEM39A-212ENST00000497993 ANKRD20A5PA0PJZ0 165 aa4.53□□□□□ -1.68
TMEM39A-212ENST00000497993 MEIOCA2RUB1 952 aa4.53□□□□□ -1.68
TMEM39A-212ENST00000497993 PSMB11A5LHX3 300 aa4.53□□□□□ -1.68
TMEM39A-212ENST00000497993 FOXI3A8MTJ6 420 aaPredicted RBP4.53□□□□□ -1.68
TMEM39A-212ENST00000497993 H3BSH0 61 aa4.53□□□□□ -1.68
TMEM39A-212ENST00000497993 H7C2Y5 167 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms