RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 PFDN6O15212 129 aa0.39□□□□□ -2.35
SMC4-227ENST00000497984 SSNA1O43805 119 aa0.39□□□□□ -2.35
SMC4-227ENST00000497984 FGF6P10767 208 aa0.39□□□□□ -2.35
SMC4-227ENST00000497984 FXYD2P54710 66 aa0.39□□□□□ -2.35
SMC4-227ENST00000497984 RPL18Q07020 188 aaKnown RBP0.39□□□□□ -2.35
SMC4-227ENST00000497984 FABP9Q0Z7S8 132 aa0.39□□□□□ -2.35
SMC4-227ENST00000497984 NDUFA5Q16718 116 aa0.39□□□□□ -2.35
SMC4-227ENST00000497984 C1orf195Q5TG92 126 aa0.39□□□□□ -2.35
SMC4-227ENST00000497984 C10orf67Q8IYJ2 551 aa0.39□□□□□ -2.35
SMC4-227ENST00000497984 DEFB125Q8N687 156 aa0.39□□□□□ -2.35
SMC4-227ENST00000497984 AQP3Q92482 292 aa0.39□□□□□ -2.35
SMC4-227ENST00000497984 ROPN1LQ96C74 230 aa0.39□□□□□ -2.35
SMC4-227ENST00000497984 DIRAS2Q96HU8 199 aa0.39□□□□□ -2.35
SMC4-227ENST00000497984 YIPF3Q9GZM5 350 aa0.39□□□□□ -2.35
SMC4-227ENST00000497984 OR51I2Q9H344 312 aa0.39□□□□□ -2.35
SMC4-227ENST00000497984 CISHQ9NSE2 258 aa0.39□□□□□ -2.35
SMC4-227ENST00000497984 FKBP14Q9NWM8 211 aa0.39□□□□□ -2.35
SMC4-227ENST00000497984 IL36BQ9NZH7 164 aa0.39□□□□□ -2.35
SMC4-227ENST00000497984 TTC21AQ8NDW8 1320 aa0.38□□□□□ -2.35
SMC4-227ENST00000497984 FREM1Q5H8C1 2179 aa0.38□□□□□ -2.35
SMC4-227ENST00000497984 INMT-MINDY4F8WBC2 141 aa0.38□□□□□ -2.35
SMC4-227ENST00000497984 YEATS4O95619 227 aa0.38□□□□□ -2.35
SMC4-227ENST00000497984 C1QAP02745 245 aa0.38□□□□□ -2.35
SMC4-227ENST00000497984 RPS4Y1P22090 263 aaKnown RBP0.38□□□□□ -2.35
SMC4-227ENST00000497984 EIF2B2P49770 351 aaKnown RBP0.38□□□□□ -2.35
SMC4-227ENST00000497984 ZNF80P51504 273 aaPredicted RBP0.38□□□□□ -2.35
SMC4-227ENST00000497984 TMED1Q13445 227 aa0.38□□□□□ -2.35
SMC4-227ENST00000497984 MED21Q13503 144 aa0.38□□□□□ -2.35
SMC4-227ENST00000497984 SYPL2Q5VXT5 272 aa0.38□□□□□ -2.35
SMC4-227ENST00000497984 TEX36Q5VZQ5 186 aa0.38□□□□□ -2.35
SMC4-227ENST00000497984 C12orf29Q8N999 325 aa0.38□□□□□ -2.35
SMC4-227ENST00000497984 SERPINI1Q99574 410 aa0.38□□□□□ -2.35
SMC4-227ENST00000497984 EFCAB1Q9HAE3 211 aa0.38□□□□□ -2.35
SMC4-227ENST00000497984 SNURFQ9Y675 71 aa0.38□□□□□ -2.35
SMC4-227ENST00000497984 CHD5Q8TDI0 1954 aa0.37□□□□□ -2.35
SMC4-227ENST00000497984 ABCC11Q96J66 1382 aa0.37□□□□□ -2.35
SMC4-227ENST00000497984 TRAV14DV4A0A0A6YYC5 116 aa0.37□□□□□ -2.35
SMC4-227ENST00000497984 C19orf84I3L1E1 186 aa0.37□□□□□ -2.35
SMC4-227ENST00000497984 NOS1APO75052 506 aaPredicted RBP0.37□□□□□ -2.35
SMC4-227ENST00000497984 SHBGP04278 402 aa0.37□□□□□ -2.35
SMC4-227ENST00000497984 PRM2P04554 102 aa0.37□□□□□ -2.35
SMC4-227ENST00000497984 METTL15P1P0C7V9 234 aa0.37□□□□□ -2.35
SMC4-227ENST00000497984 KCNE1P15382 129 aa0.37□□□□□ -2.35
SMC4-227ENST00000497984 NFYAP23511 347 aaPredicted RBP0.37□□□□□ -2.35
SMC4-227ENST00000497984 RPS12P25398 132 aaKnown RBP0.37□□□□□ -2.35
SMC4-227ENST00000497984 GUK1Q16774 197 aa0.37□□□□□ -2.35
SMC4-227ENST00000497984 SFXN4Q6P4A7 337 aa0.37□□□□□ -2.35
SMC4-227ENST00000497984 LRRN1Q6UXK5 716 aa0.37□□□□□ -2.35
SMC4-227ENST00000497984 OR2T4Q8NH00 348 aa0.37□□□□□ -2.35
SMC4-227ENST00000497984 OBSCN-AS1Q96MR7 158 aa0.37□□□□□ -2.35
SMC4-227ENST00000497984 HDHD2Q9H0R4 259 aa0.37□□□□□ -2.35
SMC4-227ENST00000497984 TRABDQ9H4I3 376 aa0.37□□□□□ -2.35
SMC4-227ENST00000497984 C3orf18Q9UK00 162 aa0.37□□□□□ -2.35
SMC4-227ENST00000497984 INTS1Q8N201 2190 aaKnown RBP0.37□□□□□ -2.35
SMC4-227ENST00000497984 SIPA1L1O43166 1804 aa0.36□□□□□ -2.35
SMC4-227ENST00000497984 IGKV1D-42A0A075B6H8 117 aa0.36□□□□□ -2.35
SMC4-227ENST00000497984 A0A0J9YY10 115 aa0.36□□□□□ -2.35
SMC4-227ENST00000497984 A0A1B0GX78 115 aa0.36□□□□□ -2.35
SMC4-227ENST00000497984 FABP5P3A8MUU1 101 aa0.36□□□□□ -2.35
SMC4-227ENST00000497984 C21orf140B9A014 251 aa0.36□□□□□ -2.35
SMC4-227ENST00000497984 M0QZ92 97 aa0.36□□□□□ -2.35
SMC4-227ENST00000497984 ACOX3O15254 700 aa0.36□□□□□ -2.35
SMC4-227ENST00000497984 MARCKSL1P49006 195 aa0.36□□□□□ -2.35
SMC4-227ENST00000497984 NAA20P61599 178 aa0.36□□□□□ -2.35
SMC4-227ENST00000497984 UBE2IP63279 158 aaKnown RBP0.36□□□□□ -2.35
SMC4-227ENST00000497984 CCL20P78556 96 aa0.36□□□□□ -2.35
SMC4-227ENST00000497984 CAV1Q03135 178 aa0.36□□□□□ -2.35
SMC4-227ENST00000497984 BATFQ16520 125 aa0.36□□□□□ -2.35
SMC4-227ENST00000497984 COQ5Q5HYK3 327 aa0.36□□□□□ -2.35
SMC4-227ENST00000497984 IBA57Q5T440 356 aaKnown RBP0.36□□□□□ -2.35
SMC4-227ENST00000497984 GLT8D1Q68CQ7 371 aa0.36□□□□□ -2.35
SMC4-227ENST00000497984 PDPK2PQ6A1A2 396 aa0.36□□□□□ -2.35
SMC4-227ENST00000497984 LCN15Q6UWW0 184 aa0.36□□□□□ -2.35
SMC4-227ENST00000497984 Q6ZQT0 140 aa0.36□□□□□ -2.35
SMC4-227ENST00000497984 FAM9CQ8IZT9 166 aa0.36□□□□□ -2.35
SMC4-227ENST00000497984 OR4C6Q8NH72 309 aa0.36□□□□□ -2.35
SMC4-227ENST00000497984 PIGXQ8TBF5 258 aa0.36□□□□□ -2.35
SMC4-227ENST00000497984 C11orf40Q8WZ69 217 aa0.36□□□□□ -2.35
SMC4-227ENST00000497984 KLK6Q92876 244 aa0.36□□□□□ -2.35
SMC4-227ENST00000497984 CNBD2Q96M20 576 aa0.36□□□□□ -2.35
SMC4-227ENST00000497984 OR5AC2Q9NZP5 309 aa0.36□□□□□ -2.35
SMC4-227ENST00000497984 DICER1Q9UPY3 1922 aaKnown RBP0.36□□□□□ -2.35
SMC4-227ENST00000497984 CACNA1BQ00975 2339 aa0.36□□□□□ -2.35
SMC4-227ENST00000497984 NAV1Q8NEY1 1877 aa0.35□□□□□ -2.35
SMC4-227ENST00000497984 BAZ2BQ9UIF8 2168 aaKnown RBP0.35□□□□□ -2.35
SMC4-227ENST00000497984 BRWD1Q9NSI6 2320 aa0.35□□□□□ -2.35
SMC4-227ENST00000497984 TRBV20OR9-2A0A075B6H5 130 aa0.35□□□□□ -2.35
SMC4-227ENST00000497984 H0Y980 276 aa0.35□□□□□ -2.35
SMC4-227ENST00000497984 CTSDP07339 412 aaPredicted RBP0.35□□□□□ -2.35
SMC4-227ENST00000497984 FKBP2P26885 142 aaKnown RBP0.35□□□□□ -2.35
SMC4-227ENST00000497984 CD151P48509 253 aa0.35□□□□□ -2.35
SMC4-227ENST00000497984 CDK10Q15131 360 aa0.35□□□□□ -2.35
SMC4-227ENST00000497984 CLVS2Q5SYC1 327 aa0.35□□□□□ -2.35
SMC4-227ENST00000497984 AADACL3Q5VUY0 350 aa0.35□□□□□ -2.35
SMC4-227ENST00000497984 ALKAL1Q6UXT8 129 aa0.35□□□□□ -2.35
SMC4-227ENST00000497984 ZNF826PQ6ZT77 177 aa0.35□□□□□ -2.35
SMC4-227ENST00000497984 AAED1Q7RTV5 226 aa0.35□□□□□ -2.35
SMC4-227ENST00000497984 KRTAP19-3Q7Z4W3 81 aa0.35□□□□□ -2.35
SMC4-227ENST00000497984 WFDC11Q8NEX6 87 aa0.35□□□□□ -2.35
SMC4-227ENST00000497984 GPR32P1Q8NGA4 272 aa0.35□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms