RNA–Protein interactions for RNA: ENST00000497026.5

CSMD3-208, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 1,406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-208ENST00000497026 TUBG1P23258 451 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 HSD11B1P28845 292 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 GCH1P30793 250 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 HRH1P35367 487 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 PPP1CCP36873 323 aaKnown RBP4.04□□□□□ -1.76
CSMD3-208ENST00000497026 CNN1P51911 297 aaKnown RBP4.04□□□□□ -1.76
CSMD3-208ENST00000497026 EFNB2P52799 333 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 SLC25A1P53007 311 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 TMEM33P57088 247 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 RAB11AP62491 216 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 RPL23AP62750 156 aaKnown RBP4.04□□□□□ -1.76
CSMD3-208ENST00000497026 PAFAH1B2P68402 229 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 CCL8P80075 99 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 IL13RA2Q14627 380 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 IAH1Q2TAA2 248 aaPredicted RBP4.04□□□□□ -1.76
CSMD3-208ENST00000497026 ZNF585BQ52M93 769 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 ACTL10Q5JWF8 245 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 VAX1Q5SQQ9 334 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 TEX43Q6ZNM6 134 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 H1FOOQ8IZA3 346 aaPredicted RBP4.04□□□□□ -1.76
CSMD3-208ENST00000497026 KLHDC1Q8N7A1 406 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 ADAD2Q8NCV1 583 aaKnown RBP4.04□□□□□ -1.76
CSMD3-208ENST00000497026 GJC3Q8NFK1 279 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 OR5H2Q8NGV7 314 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 MARCH1Q8TCQ1 289 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 AQP3Q92482 292 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 EMG1Q92979 244 aaKnown RBP4.04□□□□□ -1.76
CSMD3-208ENST00000497026 RPUSD4Q96CM3 377 aaKnown RBP4.04□□□□□ -1.76
CSMD3-208ENST00000497026 GNPNAT1Q96EK6 184 aaPredicted RBP4.04□□□□□ -1.76
CSMD3-208ENST00000497026 MS4A10Q96PG2 267 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 OR8B4Q96RC9 309 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 AMELYQ99218 206 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 P2RX4Q99571 388 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 C1QTNF5Q9BXJ0 243 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 SMIM3Q9BZL3 60 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 MAP1LC3BQ9GZQ8 125 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 CSTL1Q9H114 145 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 CHODLQ9H9P2 273 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 ELOVL3Q9HB03 270 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 UQCR10Q9UDW1 63 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 RAB22AQ9UL26 194 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 LSM5Q9Y4Y9 91 aaKnown RBP4.04□□□□□ -1.76
CSMD3-208ENST00000497026 TLN2Q9Y4G6 2542 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 HIVEP2P31629 2446 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 TRAV8-7A0A075B6U6 113 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 A0A1B0GV72 72 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 CEACAM18A8MTB9 384 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 H7BYZ3 331 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 M0R135 149 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 MLNRO43193 412 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 SPRY3O43610 288 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 TIMM8AO60220 97 aaPredicted RBP4.04□□□□□ -1.76
CSMD3-208ENST00000497026 PITX3O75364 302 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 HRASP01112 189 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 CD55P08174 381 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 SCGB1A1P11684 91 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 ZNF823P16415 610 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 TNFSF4P23510 183 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 SRP14P37108 136 aaKnown RBP4.04□□□□□ -1.76
CSMD3-208ENST00000497026 GALR1P47211 349 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 SELENOVP59797 346 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 RND3P61587 244 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 TMEM95Q3KNT9 176 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 SNAI3Q3KNW1 292 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 KRTAP21-3Q3LHN1 58 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 MORN2Q502X0 79 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 DPY19L4Q7Z388 723 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 LINC01551Q86U37 167 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 COMMD2Q86X83 199 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 C1orf174Q8IYL3 243 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 CYB561D1Q8N8Q1 229 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 CHST4Q8NCG5 386 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 OR6N2Q8NGY6 317 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 CLDND2Q8NHS1 167 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 SPATA3Q8NHX4 192 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 CMTM2Q8TAZ6 248 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 RDH5Q92781 318 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 TOMM40LQ969M1 308 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 APOBEC3DQ96AK3 386 aaPredicted RBP4.04□□□□□ -1.76
CSMD3-208ENST00000497026 SLAMF6Q96DU3 332 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 ZNF799Q96GE5 643 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 PGAM5Q96HS1 289 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 CIB3Q96Q77 187 aaPredicted RBP4.04□□□□□ -1.76
CSMD3-208ENST00000497026 RNF2Q99496 336 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 TXN2Q99757 166 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 NKX3-1Q99801 234 aaPredicted RBP4.04□□□□□ -1.76
CSMD3-208ENST00000497026 ABHD14AQ9BUJ0 271 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 MAGT1Q9H0U3 335 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 TUBG2Q9NRH3 451 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 BET1LQ9NYM9 111 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 NAT8Q9UHE5 227 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 ST3GAL6Q9Y274 331 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 KLHDC2Q9Y2U9 406 aa4.04□□□□□ -1.76
CSMD3-208ENST00000497026 NAV3Q8IVL0 2385 aa4.03□□□□□ -1.76
CSMD3-208ENST00000497026 SONP18583 2426 aaKnown RBP4.03□□□□□ -1.76
CSMD3-208ENST00000497026 NSD1Q96L73 2696 aaPredicted RBP4.03□□□□□ -1.76
CSMD3-208ENST00000497026 IGHV2-70DA0A0C4DH43 119 aa4.03□□□□□ -1.76
CSMD3-208ENST00000497026 IGHV1-69-2A0A0G2JMI3 117 aa4.03□□□□□ -1.76
CSMD3-208ENST00000497026 IQCF6A8MYZ5 107 aa4.03□□□□□ -1.76
CSMD3-208ENST00000497026 PRR32B1ATL7 298 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms