RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 C2orf15Q8WU43 125 aaKnown RBP2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 CARD19Q96LW7 228 aa2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 GABARAPL1Q9H0R8 117 aa2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 MTFP1Q9UDX5 166 aa2.52□□□□□ -2.01
SNRNP48-202ENST00000496946 SCN1AP35498 2009 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 TRAV9-2A0A087WT02 112 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 A0A1B0GTH9 108 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 GABARAPH6UMI1 98 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 APOC4-APOC2K7ER74 178 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 GNGT2O14610 69 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 SNCGO76070 127 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 SLC2A10O95528 541 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 SLC25A5P05141 298 aaKnown RBP2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 LPAR6P43657 344 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 NMUP48645 174 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 MARCKSL1P49006 195 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 H2BFSP57053 126 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 HLA-DRB3P79483 266 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 SLC25A11Q02978 314 aaKnown RBP2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 TECRLQ5HYJ1 363 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 VAX1Q5SQQ9 334 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 FAM201AQ5SY85 155 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 TMEM14EPQ6UXP3 125 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 Q6ZS92 163 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 SGPP2Q8IWX5 399 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 NEURL3Q96EH8 262 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 GPR21Q99679 349 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 EMC6Q9BV81 110 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 EIF5A2Q9GZV4 153 aaKnown RBP2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 REEP1Q9H902 201 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 MPC1Q9Y5U8 109 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 C1orf167Q5SNV9 1468 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 FMN2Q9NZ56 1722 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 RBBP6Q7Z6E9 1792 aaKnown RBP2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 TECPR2O15040 1411 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 TRAV26-2A0A0B4J265 109 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 CCL15-CCL14A0A0B4J2E2 113 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 MYBPHLA2RUH7 354 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 C5orf63A6NC05 138 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 FAM90A26D6RGX4 464 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 C17orf112F2Z3M2 114 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 H3BUT2 72 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 FCN1O00602 326 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 LMX1BO60663 402 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 ZNF253O75346 499 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 DEDDO75618 318 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 NDUFB6O95139 128 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 NCR2O95944 276 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 NAPSAO96009 420 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 IGKV5-2P06315 115 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 OR5AL1P0C617 328 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 BCL2P10415 239 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 FGF6P10767 208 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 LIFP15018 202 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 RBMXP38159 391 aaKnown RBP2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 P2RX1P51575 399 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 UBE2E1P51965 193 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 TMEM258P61165 79 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 SP4Q02446 784 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 ZNF90Q03938 601 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 IL15RAQ13261 267 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 PLK5Q496M5 336 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 LRRC37A5PQ49AS3 106 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 OR4C11Q6IEV9 310 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 LCN10Q6JVE6 187 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 MORN3Q6PF18 240 aaPredicted RBP2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 ZCCHC23Q6ZST2 131 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 ZNF571Q7Z3V5 609 aaPredicted RBP2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 ZNF101Q8IZC7 436 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 C3orf22Q8N5N4 141 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 SUMF1Q8NBK3 374 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 OTOSQ8NHW6 89 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 MRPL24Q96A35 216 aaKnown RBP2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 EEF1AKMT3Q96AZ1 226 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 UBE2E2Q96LR5 201 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 C2orf48Q96LS8 159 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 PMCHL2Q9BQD1 86 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 C20orf78Q9BR46 151 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 RHNO1Q9BSD3 238 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 SIX2Q9NPC8 291 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 SDR39U1Q9NRG7 319 aaPredicted RBP2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 C21orf62Q9NYP8 219 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 FIS1Q9Y3D6 152 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 PYGO1Q9Y3Y4 419 aa2.51□□□□□ -2.01
SNRNP48-202ENST00000496946 SSC5DA1L4H1 1573 aa2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 NRKQ7Z2Y5 1582 aa2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 CRYBG1Q9Y4K1 1723 aa2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 A0A0J9YW62 118 aa2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 A0A0U1RQV1 116 aa2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 LY6LH3BQJ8 138 aa2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 TNFSF12O43508 249 aa2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 SPRY3O43610 288 aa2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 BUB3O43684 328 aa2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 DUSP14O95147 198 aaKnown RBP2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 NTN1O95631 604 aa2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 OR9G9P0C7N8 305 aa2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 CECR9P0C854 216 aa2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 PPP1CCP36873 323 aaKnown RBP2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 PLGLB1Q02325 96 aa2.5□□□□□ -2.01
SNRNP48-202ENST00000496946 ZNF85Q03923 595 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms