RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 CCL21O00585 134 aa10.62□□□□□ -0.71
GARNL3-220ENST00000496711 PLAUP00749 431 aa10.62□□□□□ -0.71
GARNL3-220ENST00000496711 CXCL1P09341 107 aa10.62□□□□□ -0.71
GARNL3-220ENST00000496711 RPS10P46783 165 aaKnown RBP10.62□□□□□ -0.71
GARNL3-220ENST00000496711 TMEM241Q24JQ0 296 aa10.62□□□□□ -0.71
GARNL3-220ENST00000496711 PDPNQ86YL7 162 aa10.62□□□□□ -0.71
GARNL3-220ENST00000496711 LINC01560Q8TB33 94 aa10.62□□□□□ -0.71
GARNL3-220ENST00000496711 C1orf159Q96HA4 380 aa10.62□□□□□ -0.71
GARNL3-220ENST00000496711 C11orf94C9JXX5 98 aa10.61□□□□□ -0.71
GARNL3-220ENST00000496711 OPN1MWP04001 364 aa10.61□□□□□ -0.71
GARNL3-220ENST00000496711 OPN1MW2P0DN77 364 aa10.61□□□□□ -0.71
GARNL3-220ENST00000496711 OPN1MW3P0DN78 364 aa10.61□□□□□ -0.71
GARNL3-220ENST00000496711 REG1BP48304 166 aa10.61□□□□□ -0.71
GARNL3-220ENST00000496711 RND2P52198 227 aa10.61□□□□□ -0.71
GARNL3-220ENST00000496711 ATP5IP56385 69 aaPredicted RBP10.61□□□□□ -0.71
GARNL3-220ENST00000496711 B2MP61769 119 aa10.61□□□□□ -0.71
GARNL3-220ENST00000496711 RAB31Q13636 194 aa10.61□□□□□ -0.71
GARNL3-220ENST00000496711 ADIRFQ15847 76 aa10.61□□□□□ -0.71
GARNL3-220ENST00000496711 SSMEM1Q8WWF3 244 aa10.61□□□□□ -0.71
GARNL3-220ENST00000496711 FLYWCH2Q96CP2 140 aaKnown RBP10.61□□□□□ -0.71
GARNL3-220ENST00000496711 NABP2Q9BQ15 211 aa10.61□□□□□ -0.71
GARNL3-220ENST00000496711 CTDSP1Q9GZU7 261 aa10.61□□□□□ -0.71
GARNL3-220ENST00000496711 TRBV23-1A0A0A0MS06 115 aa10.61□□□□□ -0.71
GARNL3-220ENST00000496711 TGIF2-C20orf24A0A0A6YYL0 155 aa10.61□□□□□ -0.71
GARNL3-220ENST00000496711 UBE2CO00762 179 aa10.61□□□□□ -0.71
GARNL3-220ENST00000496711 STAG3L2P0CL84 134 aa10.61□□□□□ -0.71
GARNL3-220ENST00000496711 STAG3L3P0CL85 134 aa10.61□□□□□ -0.71
GARNL3-220ENST00000496711 ZNF137PP52743 207 aa10.61□□□□□ -0.71
GARNL3-220ENST00000496711 MUC15Q8N387 334 aa10.61□□□□□ -0.71
GARNL3-220ENST00000496711 STPG3Q8N7X2 389 aa10.61□□□□□ -0.71
GARNL3-220ENST00000496711 OR9G1Q8NH87 305 aa10.61□□□□□ -0.71
GARNL3-220ENST00000496711 CXorf1O96002 111 aa10.6□□□□□ -0.71
GARNL3-220ENST00000496711 ARL14EPLP0DKL9 152 aa10.6□□□□□ -0.71
GARNL3-220ENST00000496711 IGHV1-8P0DP01 117 aa10.6□□□□□ -0.71
GARNL3-220ENST00000496711 USF1P22415 310 aaPredicted RBP10.6□□□□□ -0.71
GARNL3-220ENST00000496711 GRNP28799 593 aaKnown RBP10.6□□□□□ -0.71
GARNL3-220ENST00000496711 RPL29P47914 159 aaKnown RBP10.6□□□□□ -0.71
GARNL3-220ENST00000496711 BSXQ3C1V8 233 aa10.6□□□□□ -0.71
GARNL3-220ENST00000496711 C2orf83Q53S99 150 aa10.6□□□□□ -0.71
GARNL3-220ENST00000496711 SPNS3Q6ZMD2 512 aa10.6□□□□□ -0.71
GARNL3-220ENST00000496711 OR4C13Q8NGP0 309 aa10.6□□□□□ -0.71
GARNL3-220ENST00000496711 OR1L8Q8NGR8 309 aa10.6□□□□□ -0.71
GARNL3-220ENST00000496711 OR4A5Q8NH83 315 aa10.6□□□□□ -0.71
GARNL3-220ENST00000496711 VSTM2AQ8TAG5 236 aa10.6□□□□□ -0.71
GARNL3-220ENST00000496711 ST6GALNAC6Q969X2 333 aa10.6□□□□□ -0.71
GARNL3-220ENST00000496711 COMMD5Q9GZQ3 224 aa10.6□□□□□ -0.71
GARNL3-220ENST00000496711 WASHC3Q9Y3C0 194 aa10.6□□□□□ -0.71
GARNL3-220ENST00000496711 SIAH2O43255 324 aa10.59□□□□□ -0.71
GARNL3-220ENST00000496711 PDE6DO43924 150 aa10.59□□□□□ -0.71
GARNL3-220ENST00000496711 IGHV2-5P01817 119 aa10.59□□□□□ -0.71
GARNL3-220ENST00000496711 IGFBP2P18065 325 aa10.59□□□□□ -0.71
GARNL3-220ENST00000496711 IL3RAP26951 378 aa10.59□□□□□ -0.71
GARNL3-220ENST00000496711 RPL23P62829 140 aaKnown RBP10.59□□□□□ -0.71
GARNL3-220ENST00000496711 RPL8P62917 257 aaKnown RBP10.59□□□□□ -0.71
GARNL3-220ENST00000496711 DIAPH2-AS1Q14236 149 aa10.59□□□□□ -0.71
GARNL3-220ENST00000496711 TGIF2LXQ8IUE1 241 aa10.59□□□□□ -0.71
GARNL3-220ENST00000496711 TMEM167AQ8TBQ9 72 aa10.59□□□□□ -0.71
GARNL3-220ENST00000496711 PCGF1Q9BSM1 259 aa10.59□□□□□ -0.71
GARNL3-220ENST00000496711 METTL1Q9UBP6 276 aaKnown RBP10.59□□□□□ -0.71
GARNL3-220ENST00000496711 IGF2RP11717 2491 aa10.59□□□□□ -0.71
GARNL3-220ENST00000496711 RNASE2P10153 161 aaKnown RBP10.59□□□□□ -0.71
GARNL3-220ENST00000496711 UBE2G2P60604 165 aa10.59□□□□□ -0.71
GARNL3-220ENST00000496711 RHOBP62745 196 aa10.59□□□□□ -0.71
GARNL3-220ENST00000496711 PRR20EP86478 221 aa10.59□□□□□ -0.71
GARNL3-220ENST00000496711 PRR20CP86479 221 aa10.59□□□□□ -0.71
GARNL3-220ENST00000496711 PRR20DP86480 221 aa10.59□□□□□ -0.71
GARNL3-220ENST00000496711 PRR20BP86481 221 aa10.59□□□□□ -0.71
GARNL3-220ENST00000496711 PRR20AP86496 221 aa10.59□□□□□ -0.71
GARNL3-220ENST00000496711 ZNF672Q499Z4 452 aaPredicted RBP10.59□□□□□ -0.71
GARNL3-220ENST00000496711 ABHD5Q8WTS1 349 aa10.59□□□□□ -0.71
GARNL3-220ENST00000496711 SSX3Q99909 188 aa10.59□□□□□ -0.71
GARNL3-220ENST00000496711 TXNDC17Q9BRA2 123 aa10.59□□□□□ -0.71
GARNL3-220ENST00000496711 TMEM133Q9H2Q1 129 aa10.59□□□□□ -0.71
GARNL3-220ENST00000496711 NDUFA4L2Q9NRX3 87 aa10.59□□□□□ -0.71
GARNL3-220ENST00000496711 F6UZH7 168 aa10.58□□□□□ -0.72
GARNL3-220ENST00000496711 INS-IGF2F8WCM5 200 aa10.58□□□□□ -0.72
GARNL3-220ENST00000496711 VENTXO95231 258 aa10.58□□□□□ -0.72
GARNL3-220ENST00000496711 ATP5G3P48201 142 aa10.58□□□□□ -0.72
GARNL3-220ENST00000496711 ADORA2A-AS1P86434 159 aa10.58□□□□□ -0.72
GARNL3-220ENST00000496711 FABP9Q0Z7S8 132 aa10.58□□□□□ -0.72
GARNL3-220ENST00000496711 CST9LP1Q5W188 147 aa10.58□□□□□ -0.72
GARNL3-220ENST00000496711 TMEM144Q7Z5S9 345 aa10.58□□□□□ -0.72
GARNL3-220ENST00000496711 RALYQ9UKM9 306 aaKnown RBP10.58□□□□□ -0.72
GARNL3-220ENST00000496711 A0A1W2PN81 502 aa10.57□□□□□ -0.72
GARNL3-220ENST00000496711 AP4M1O00189 453 aa10.57□□□□□ -0.72
GARNL3-220ENST00000496711 FSTL3O95633 263 aa10.57□□□□□ -0.72
GARNL3-220ENST00000496711 CHRNA7P36544 502 aa10.57□□□□□ -0.72
GARNL3-220ENST00000496711 PPOXP50336 477 aa10.57□□□□□ -0.72
GARNL3-220ENST00000496711 KIAA0141Q14154 515 aaPredicted RBP10.57□□□□□ -0.72
GARNL3-220ENST00000496711 C16orf82Q7Z2V1 217 aa10.57□□□□□ -0.72
GARNL3-220ENST00000496711 C11orf42Q8N5U0 333 aa10.57□□□□□ -0.72
GARNL3-220ENST00000496711 OR10W1Q8NGF6 305 aa10.57□□□□□ -0.72
GARNL3-220ENST00000496711 NANPQ8TBE9 248 aa10.57□□□□□ -0.72
GARNL3-220ENST00000496711 TNFRSF14Q92956 283 aa10.57□□□□□ -0.72
GARNL3-220ENST00000496711 FAM210BQ96KR6 192 aa10.57□□□□□ -0.72
GARNL3-220ENST00000496711 ANKHD1Q8IWZ3 2542 aaKnown RBP10.57□□□□□ -0.72
GARNL3-220ENST00000496711 TRBV24-1A0A075B6N3 115 aa10.57□□□□□ -0.72
GARNL3-220ENST00000496711 ZNF98A6NK75 572 aa10.57□□□□□ -0.72
GARNL3-220ENST00000496711 LYNX1G3V0Z9 82 aa10.57□□□□□ -0.72
GARNL3-220ENST00000496711 DLL1O00548 723 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms