RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, human

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CRNKL1-205	ENST00000496549	SPINK9	Q5DT21	86 aa		6.88	□□□□□ -1.31
CRNKL1-205	ENST00000496549	SH2D6	Q7Z4S9	175 aa		6.88	□□□□□ -1.31
CRNKL1-205	ENST00000496549	FGFRL1	Q8N441	504 aa		6.88	□□□□□ -1.31
CRNKL1-205	ENST00000496549	SOCS4	Q8WXH5	440 aa		6.88	□□□□□ -1.31
CRNKL1-205	ENST00000496549	LHFPL6	Q9Y693	200 aa		6.88	□□□□□ -1.31
CRNKL1-205	ENST00000496549	CACNA1I	Q9P0X4	2223 aa		6.88	□□□□□ -1.31
CRNKL1-205	ENST00000496549	IGKV1-9	A0A0C4DH69	117 aa		6.88	□□□□□ -1.31
CRNKL1-205	ENST00000496549	IFITM1	P13164	125 aa		6.88	□□□□□ -1.31
CRNKL1-205	ENST00000496549	TMPRSS3	P57727	454 aa		6.88	□□□□□ -1.31
CRNKL1-205	ENST00000496549	UBE2L3	P68036	154 aa	Known RBP	6.88	□□□□□ -1.31
CRNKL1-205	ENST00000496549	RIG	Q13278	110 aa		6.88	□□□□□ -1.31
CRNKL1-205	ENST00000496549	SPATA12	Q7Z6I5	190 aa		6.88	□□□□□ -1.31
CRNKL1-205	ENST00000496549	ZNF775	Q96BV0	537 aa	Predicted RBP	6.88	□□□□□ -1.31
CRNKL1-205	ENST00000496549	C1orf147	Q96MC9	270 aa	Predicted RBP	6.88	□□□□□ -1.31
CRNKL1-205	ENST00000496549	RNF114	Q9Y508	228 aa		6.88	□□□□□ -1.31
CRNKL1-205	ENST00000496549	ATP23	Q9Y6H3	246 aa		6.88	□□□□□ -1.31
CRNKL1-205	ENST00000496549		V9GYV3	84 aa		6.88	□□□□□ -1.31
CRNKL1-205	ENST00000496549	COL6A3	P12111	3177 aa		6.88	□□□□□ -1.31
CRNKL1-205	ENST00000496549	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	6.87	□□□□□ -1.31
CRNKL1-205	ENST00000496549		A0A1W2PRD5	423 aa		6.87	□□□□□ -1.31
CRNKL1-205	ENST00000496549		A0A1W2PRF3	423 aa		6.87	□□□□□ -1.31
CRNKL1-205	ENST00000496549		A0A1W2PRM7	423 aa		6.87	□□□□□ -1.31
CRNKL1-205	ENST00000496549		K7EQS6	105 aa		6.87	□□□□□ -1.31
CRNKL1-205	ENST00000496549	OPRK1	P41145	380 aa		6.87	□□□□□ -1.31
CRNKL1-205	ENST00000496549	TEPP	Q6URK8	271 aa		6.87	□□□□□ -1.31
CRNKL1-205	ENST00000496549	SPAG8	Q99932	426 aa	Predicted RBP	6.87	□□□□□ -1.31
CRNKL1-205	ENST00000496549	TBC1D29	Q9UFV1	150 aa		6.87	□□□□□ -1.31
CRNKL1-205	ENST00000496549	ATG2B	Q96BY7	2078 aa		6.87	□□□□□ -1.31
CRNKL1-205	ENST00000496549	TRAV8-2	A0A0B4J237	113 aa		6.87	□□□□□ -1.31
CRNKL1-205	ENST00000496549	FRG2C	A6NGY1	282 aa		6.87	□□□□□ -1.31
CRNKL1-205	ENST00000496549	HIGD1C	A8MV81	97 aa		6.87	□□□□□ -1.31
CRNKL1-205	ENST00000496549	FCN3	O75636	299 aa		6.87	□□□□□ -1.31
CRNKL1-205	ENST00000496549	CCL5	P13501	91 aa		6.87	□□□□□ -1.31
CRNKL1-205	ENST00000496549	LINC00310	P59036	64 aa		6.87	□□□□□ -1.31
CRNKL1-205	ENST00000496549	WFDC2	Q14508	124 aa		6.87	□□□□□ -1.31
CRNKL1-205	ENST00000496549		H3BMG7	143 aa		6.87	□□□□□ -1.31
CRNKL1-205	ENST00000496549	MT-CO3	P00414	261 aa		6.87	□□□□□ -1.31
CRNKL1-205	ENST00000496549	GABRG2	P18507	467 aa		6.87	□□□□□ -1.31
CRNKL1-205	ENST00000496549	PLGLB1	Q02325	96 aa		6.87	□□□□□ -1.31
CRNKL1-205	ENST00000496549	WIPI1	Q5MNZ9	446 aa	Predicted RBP	6.87	□□□□□ -1.31
CRNKL1-205	ENST00000496549	INO80C	Q6PI98	192 aa	Predicted RBP	6.87	□□□□□ -1.31
CRNKL1-205	ENST00000496549	SPACA3	Q8IXA5	215 aa		6.87	□□□□□ -1.31
CRNKL1-205	ENST00000496549	ZNF645	Q8N7E2	425 aa		6.87	□□□□□ -1.31
CRNKL1-205	ENST00000496549	ASCC3	Q8N3C0	2202 aa	Known RBP	6.87	□□□□□ -1.31
CRNKL1-205	ENST00000496549	OTOL1	A6NHN0	477 aa	Predicted RBP	6.86	□□□□□ -1.31
CRNKL1-205	ENST00000496549	CCL16	O15467	120 aa		6.86	□□□□□ -1.31
CRNKL1-205	ENST00000496549	ZG16	O60844	167 aa		6.86	□□□□□ -1.31
CRNKL1-205	ENST00000496549	APOH	P02749	345 aa	Predicted RBP	6.86	□□□□□ -1.31
CRNKL1-205	ENST00000496549	DEFA4	P12838	97 aa		6.86	□□□□□ -1.31
CRNKL1-205	ENST00000496549	CYBA	P13498	195 aa		6.86	□□□□□ -1.31
CRNKL1-205	ENST00000496549	FCGR2B	P31994	310 aa	Predicted RBP	6.86	□□□□□ -1.31
CRNKL1-205	ENST00000496549	RPS21	P63220	83 aa	Known RBP	6.86	□□□□□ -1.31
CRNKL1-205	ENST00000496549	TMEM14EP	Q6UXP3	125 aa		6.86	□□□□□ -1.31
CRNKL1-205	ENST00000496549	RNF144B	Q7Z419	303 aa		6.86	□□□□□ -1.31
CRNKL1-205	ENST00000496549	LYPD6	Q86Y78	171 aa		6.86	□□□□□ -1.31
CRNKL1-205	ENST00000496549	RBMXL3	Q8N7X1	1067 aa	Known RBP	6.86	□□□□□ -1.31
CRNKL1-205	ENST00000496549	MRPL43	Q8N983	215 aa	Known RBP	6.86	□□□□□ -1.31
CRNKL1-205	ENST00000496549	TMEM52	Q8NDY8	209 aa		6.86	□□□□□ -1.31
CRNKL1-205	ENST00000496549	OR5AN1	Q8NGI8	311 aa		6.86	□□□□□ -1.31
CRNKL1-205	ENST00000496549	PPDPFL	Q8WWR9	84 aa		6.86	□□□□□ -1.31
CRNKL1-205	ENST00000496549	HSD17B10	Q99714	261 aa	Known RBP	6.86	□□□□□ -1.31
CRNKL1-205	ENST00000496549	C1QTNF5	Q9BXJ0	243 aa		6.86	□□□□□ -1.31
CRNKL1-205	ENST00000496549	PEBP1	P30086	187 aa	Known RBP	6.86	□□□□□ -1.31
CRNKL1-205	ENST00000496549	VDAC2	P45880	294 aa	Predicted RBP	6.86	□□□□□ -1.31
CRNKL1-205	ENST00000496549	PCBD1	P61457	104 aa		6.86	□□□□□ -1.31
CRNKL1-205	ENST00000496549	ZXDA	P98168	799 aa		6.86	□□□□□ -1.31
CRNKL1-205	ENST00000496549	PIMREG	Q9BSJ6	248 aa		6.86	□□□□□ -1.31
CRNKL1-205	ENST00000496549	MCRIP2	Q9BUT9	160 aa	Known RBP	6.86	□□□□□ -1.31
CRNKL1-205	ENST00000496549	LIME1	Q9H400	295 aa		6.86	□□□□□ -1.31
CRNKL1-205	ENST00000496549	SIGLEC8	Q9NYZ4	499 aa		6.86	□□□□□ -1.31
CRNKL1-205	ENST00000496549	FANCM	Q8IYD8	2048 aa		6.86	□□□□□ -1.31
CRNKL1-205	ENST00000496549	LOC102723996	A0A087X1L8	192 aa		6.86	□□□□□ -1.31
CRNKL1-205	ENST00000496549		A8MWV9	139 aa		6.86	□□□□□ -1.31
CRNKL1-205	ENST00000496549	RPL13A	P40429	203 aa	Known RBP	6.86	□□□□□ -1.31
CRNKL1-205	ENST00000496549	ID1	P41134	155 aa		6.86	□□□□□ -1.31
CRNKL1-205	ENST00000496549	PSMB2	P49721	201 aa		6.86	□□□□□ -1.31
CRNKL1-205	ENST00000496549	POU2AF1	Q16633	256 aa		6.86	□□□□□ -1.31
CRNKL1-205	ENST00000496549	YAF2	Q8IY57	180 aa		6.86	□□□□□ -1.31
CRNKL1-205	ENST00000496549	C10orf126	Q8N4M7	172 aa		6.86	□□□□□ -1.31
CRNKL1-205	ENST00000496549	DLX4	Q92988	240 aa	Predicted RBP	6.86	□□□□□ -1.31
CRNKL1-205	ENST00000496549	TMEM126A	Q9H061	195 aa		6.86	□□□□□ -1.31
CRNKL1-205	ENST00000496549	C1RL	Q9NZP8	487 aa		6.86	□□□□□ -1.31
CRNKL1-205	ENST00000496549	KIAA2026	Q5HYC2	2103 aa		6.86	□□□□□ -1.31
CRNKL1-205	ENST00000496549	FAM90A10P	A6NDY2	464 aa		6.86	□□□□□ -1.31
CRNKL1-205	ENST00000496549	FAM90A18P	A6NE21	464 aa		6.86	□□□□□ -1.31
CRNKL1-205	ENST00000496549	FAM90A16P	A6NEW6	464 aa		6.86	□□□□□ -1.31
CRNKL1-205	ENST00000496549	FAM90A20P	A6NIJ5	464 aa		6.86	□□□□□ -1.31
CRNKL1-205	ENST00000496549	FAM90A8P	A6NJQ4	464 aa		6.86	□□□□□ -1.31
CRNKL1-205	ENST00000496549	FAM90A7P	A6NKC0	464 aa		6.86	□□□□□ -1.31
CRNKL1-205	ENST00000496549	NCBP2L	A6PVI3	153 aa	Known RBP	6.86	□□□□□ -1.31
CRNKL1-205	ENST00000496549	FAM90A22P	A8MWA6	464 aa		6.86	□□□□□ -1.31
CRNKL1-205	ENST00000496549	FAM90A12P	A8MX19	464 aa		6.86	□□□□□ -1.31
CRNKL1-205	ENST00000496549	FAM90A5P	A8MXJ8	464 aa		6.86	□□□□□ -1.31
CRNKL1-205	ENST00000496549	FAM90A23P	A8MXZ1	464 aa		6.86	□□□□□ -1.31
CRNKL1-205	ENST00000496549	TNFSF11	O14788	317 aa		6.86	□□□□□ -1.31
CRNKL1-205	ENST00000496549	DHH	O43323	396 aa		6.86	□□□□□ -1.31
CRNKL1-205	ENST00000496549	TSPAN13	O95857	204 aa		6.86	□□□□□ -1.31
CRNKL1-205	ENST00000496549	FAM90A15P	P0C7V4	464 aa		6.86	□□□□□ -1.31
CRNKL1-205	ENST00000496549	FAM90A13P	P0C7W8	464 aa		6.86	□□□□□ -1.31
CRNKL1-205	ENST00000496549	FAM90A14P	P0C7W9	464 aa		6.86	□□□□□ -1.31

Retrieved 100 of 20,778 RNA–protein pairs in 125 ms