RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 MECP2P51608 486 aaKnown RBP11.92□□□□□ -0.5
HDAC4-213ENST00000496347 ZNF585BQ52M93 769 aa11.92□□□□□ -0.5
HDAC4-213ENST00000496347 RNASE10Q5GAN6 216 aaKnown RBP11.92□□□□□ -0.5
HDAC4-213ENST00000496347 CLEC19AQ6UXS0 136 aa11.92□□□□□ -0.5
HDAC4-213ENST00000496347 ARRDC1Q8N5I2 433 aa11.92□□□□□ -0.5
HDAC4-213ENST00000496347 ZMAT4Q9H898 229 aa11.92□□□□□ -0.5
HDAC4-213ENST00000496347 ZC4H2Q9NQZ6 224 aa11.92□□□□□ -0.5
HDAC4-213ENST00000496347 C19orf73Q9NVV2 129 aa11.92□□□□□ -0.5
HDAC4-213ENST00000496347 TECRQ9NZ01 308 aaKnown RBP11.92□□□□□ -0.5
HDAC4-213ENST00000496347 EXTL2Q9UBQ6 330 aa11.92□□□□□ -0.5
HDAC4-213ENST00000496347 C15orf61A6NNL5 157 aa11.91□□□□□ -0.5
HDAC4-213ENST00000496347 IGHV3-23P01764 117 aa11.91□□□□□ -0.5
HDAC4-213ENST00000496347 HLA-AP01891 365 aaKnown RBP11.91□□□□□ -0.5
HDAC4-213ENST00000496347 RPA2P15927 270 aa11.91□□□□□ -0.5
HDAC4-213ENST00000496347 PTBP1P26599 531 aaKnown RBP eCLIP11.91□□□□□ -0.51e-9■■■□□ 18.1
HDAC4-213ENST00000496347 WT1-ASQ06250 92 aa11.91□□□□□ -0.5
HDAC4-213ENST00000496347 CD300EQ496F6 205 aaPredicted RBP11.91□□□□□ -0.5
HDAC4-213ENST00000496347 FAM106AQ4KMX7 169 aa11.91□□□□□ -0.5
HDAC4-213ENST00000496347 ADAMTSL5Q6ZMM2 481 aa11.91□□□□□ -0.5
HDAC4-213ENST00000496347 TBC1D26Q86UD7 250 aa11.91□□□□□ -0.5
HDAC4-213ENST00000496347 ZNF502Q8TBZ5 544 aa11.91□□□□□ -0.5
HDAC4-213ENST00000496347 VN1R17PQ8TDU5 208 aa11.91□□□□□ -0.5
HDAC4-213ENST00000496347 ZNF486Q96H40 463 aaPredicted RBP11.91□□□□□ -0.5
HDAC4-213ENST00000496347 TM2D3Q9BRN9 247 aa11.91□□□□□ -0.5
HDAC4-213ENST00000496347 NDUFA4L2Q9NRX3 87 aa11.91□□□□□ -0.5
HDAC4-213ENST00000496347 TMEM14BQ9NUH8 114 aa11.91□□□□□ -0.5
HDAC4-213ENST00000496347 FKBP11Q9NYL4 201 aa11.91□□□□□ -0.5
HDAC4-213ENST00000496347 MTFP1Q9UDX5 166 aa11.91□□□□□ -0.5
HDAC4-213ENST00000496347 OR51B2Q9Y5P1 312 aa11.91□□□□□ -0.5
HDAC4-213ENST00000496347 OR2C1O95371 312 aa11.9□□□□□ -0.5
HDAC4-213ENST00000496347 IFNA6P05013 189 aa11.9□□□□□ -0.5
HDAC4-213ENST00000496347 SERPINE2P07093 398 aa11.9□□□□□ -0.5
HDAC4-213ENST00000496347 OR13C7P0DN81 318 aa11.9□□□□□ -0.5
HDAC4-213ENST00000496347 FOLR2P14207 255 aa11.9□□□□□ -0.5
HDAC4-213ENST00000496347 GPR183P32249 361 aa11.9□□□□□ -0.5
HDAC4-213ENST00000496347 RND3P61587 244 aa11.9□□□□□ -0.5
HDAC4-213ENST00000496347 OR10W1Q8NGF6 305 aa11.9□□□□□ -0.5
HDAC4-213ENST00000496347 ATP6V0BQ99437 205 aa11.9□□□□□ -0.5
HDAC4-213ENST00000496347 BCL7BQ9BQE9 202 aa11.9□□□□□ -0.5
HDAC4-213ENST00000496347 KLK11Q9UBX7 282 aa11.9□□□□□ -0.5
HDAC4-213ENST00000496347 F11RQ9Y624 299 aaKnown RBP11.9□□□□□ -0.5
HDAC4-213ENST00000496347 S4R3C0 116 aa11.9□□□□□ -0.5
HDAC4-213ENST00000496347 TEX50A0A1B0GTY4 177 aa11.89□□□□□ -0.51
HDAC4-213ENST00000496347 TMEM213A2RRL7 107 aa11.89□□□□□ -0.51
HDAC4-213ENST00000496347 IZUMO1RA6ND01 250 aa11.89□□□□□ -0.51
HDAC4-213ENST00000496347 M0QYG6 137 aa11.89□□□□□ -0.51
HDAC4-213ENST00000496347 MRPS10P82664 201 aaKnown RBP11.89□□□□□ -0.51
HDAC4-213ENST00000496347 SSBP1Q04837 148 aaKnown RBP11.89□□□□□ -0.51
HDAC4-213ENST00000496347 DEFB114Q30KQ6 69 aa11.89□□□□□ -0.51
HDAC4-213ENST00000496347 LHFPL1Q86WI0 220 aa11.89□□□□□ -0.51
HDAC4-213ENST00000496347 OR1L6Q8NGR2 347 aa11.89□□□□□ -0.51
HDAC4-213ENST00000496347 OR52I2Q8NH67 350 aa11.89□□□□□ -0.51
HDAC4-213ENST00000496347 RAB2BQ8WUD1 216 aa11.89□□□□□ -0.51
HDAC4-213ENST00000496347 TMEM56Q96MV1 263 aa11.89□□□□□ -0.51
HDAC4-213ENST00000496347 SLC2A8Q9NY64 477 aa11.89□□□□□ -0.51
HDAC4-213ENST00000496347 CLEC3BP05452 202 aa11.88□□□□□ -0.51
HDAC4-213ENST00000496347 TAS2R19P59542 299 aa11.88□□□□□ -0.51
HDAC4-213ENST00000496347 CD81P60033 236 aa11.88□□□□□ -0.51
HDAC4-213ENST00000496347 RNASE12Q5GAN4 147 aaKnown RBP11.88□□□□□ -0.51
HDAC4-213ENST00000496347 H2BFWTQ7Z2G1 175 aa11.88□□□□□ -0.51
HDAC4-213ENST00000496347 MARC2Q969Z3 335 aa11.88□□□□□ -0.51
HDAC4-213ENST00000496347 BSCL2Q96G97 398 aaPredicted RBP11.88□□□□□ -0.51
HDAC4-213ENST00000496347 SEC22AQ96IW7 307 aa11.88□□□□□ -0.51
HDAC4-213ENST00000496347 HINT2Q9BX68 163 aa11.88□□□□□ -0.51
HDAC4-213ENST00000496347 PALMDQ9NP74 551 aa11.88□□□□□ -0.51
HDAC4-213ENST00000496347 CCDC59Q9P031 241 aaKnown RBP11.88□□□□□ -0.51
HDAC4-213ENST00000496347 NSG2Q9Y328 171 aa11.88□□□□□ -0.51
HDAC4-213ENST00000496347 ZNF320A2RRD8 509 aa11.87□□□□□ -0.51
HDAC4-213ENST00000496347 C3orf84H3BNL1 204 aa11.87□□□□□ -0.51
HDAC4-213ENST00000496347 GABARAPH6UMI1 98 aa11.87□□□□□ -0.51
HDAC4-213ENST00000496347 RGS5O15539 181 aa11.87□□□□□ -0.51
HDAC4-213ENST00000496347 TGOLN2O43493 480 aa11.87□□□□□ -0.51
HDAC4-213ENST00000496347 CD74P04233 296 aa11.87□□□□□ -0.51
HDAC4-213ENST00000496347 CD3DP04234 171 aa11.87□□□□□ -0.51
HDAC4-213ENST00000496347 PGAM2P15259 253 aa11.87□□□□□ -0.51
HDAC4-213ENST00000496347 CBLN1P23435 193 aa11.87□□□□□ -0.51
HDAC4-213ENST00000496347 ELLP55199 621 aaPredicted RBP11.87□□□□□ -0.51
HDAC4-213ENST00000496347 SPCS2Q15005 226 aa11.87□□□□□ -0.51
HDAC4-213ENST00000496347 SPSB3Q6PJ21 355 aa11.87□□□□□ -0.51
HDAC4-213ENST00000496347 PLET1Q6UQ28 207 aa11.87□□□□□ -0.51
HDAC4-213ENST00000496347 OR1P1Q8NH06 330 aa11.87□□□□□ -0.51
HDAC4-213ENST00000496347 TMEM190Q8WZ59 177 aa11.87□□□□□ -0.51
HDAC4-213ENST00000496347 MRGPRFQ96AM1 343 aa11.87□□□□□ -0.51
HDAC4-213ENST00000496347 ABHD1Q96SE0 405 aa11.87□□□□□ -0.51
HDAC4-213ENST00000496347 SPATA25Q9BR10 227 aa11.87□□□□□ -0.51
HDAC4-213ENST00000496347 TUBA4BQ9H853 241 aa11.87□□□□□ -0.51
HDAC4-213ENST00000496347 RABL2AQ9UBK7 228 aaPredicted RBP11.87□□□□□ -0.51
HDAC4-213ENST00000496347 RABL2BQ9UNT1 228 aa11.87□□□□□ -0.51
HDAC4-213ENST00000496347 DBX1A6NMT0 343 aa11.86□□□□□ -0.51
HDAC4-213ENST00000496347 PIGPP57054 158 aa11.86□□□□□ -0.51
HDAC4-213ENST00000496347 ZNF57Q68EA5 555 aaPredicted RBP11.86□□□□□ -0.51
HDAC4-213ENST00000496347 TMEM229BQ8NBD8 167 aa11.86□□□□□ -0.51
HDAC4-213ENST00000496347 ZNF114Q8NC26 417 aa11.86□□□□□ -0.51
HDAC4-213ENST00000496347 OR4A16Q8NH70 328 aa11.86□□□□□ -0.51
HDAC4-213ENST00000496347 SMIM4Q8WVI0 70 aa11.86□□□□□ -0.51
HDAC4-213ENST00000496347 CACNG8Q8WXS5 425 aa11.86□□□□□ -0.51
HDAC4-213ENST00000496347 NEURL2Q9BR09 285 aa11.86□□□□□ -0.51
HDAC4-213ENST00000496347 ZNF436Q9C0F3 470 aaPredicted RBP11.86□□□□□ -0.51
HDAC4-213ENST00000496347 MIXL1Q9H2W2 232 aa11.86□□□□□ -0.51
HDAC4-213ENST00000496347 C21orf62Q9NYP8 219 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms