RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 IGLV3-32A0A0A0MS00 114 aa16.14■□□□□ 0.17
COL27A1-207ENST00000494090 GRIFINA4D1Z8 144 aa16.14■□□□□ 0.17
COL27A1-207ENST00000494090 C17orf98A8MV24 154 aa16.14■□□□□ 0.17
COL27A1-207ENST00000494090 PROB1E7EW31 1015 aa16.14■□□□□ 0.17
COL27A1-207ENST00000494090 NPFFO15130 113 aa16.14■□□□□ 0.17
COL27A1-207ENST00000494090 JOSD1Q15040 202 aaPredicted RBP16.14■□□□□ 0.17
COL27A1-207ENST00000494090 RNASE6Q93091 150 aaKnown RBP16.14■□□□□ 0.17
COL27A1-207ENST00000494090 PRR32B1ATL7 298 aa16.14■□□□□ 0.17
COL27A1-207ENST00000494090 TCTAP57738 103 aa16.14■□□□□ 0.17
COL27A1-207ENST00000494090 A0A0G2JMM0 328 aa16.14■□□□□ 0.17
COL27A1-207ENST00000494090 A0A1W2PPB8 328 aa16.14■□□□□ 0.17
COL27A1-207ENST00000494090 A0A1W2PRS3 328 aa16.14■□□□□ 0.17
COL27A1-207ENST00000494090 KIR3DP1A8MWS1 328 aa16.14■□□□□ 0.17
COL27A1-207ENST00000494090 NPIPB7O75200 414 aa16.14■□□□□ 0.17
COL27A1-207ENST00000494090 CEACAM4O75871 244 aa16.14■□□□□ 0.17
COL27A1-207ENST00000494090 EGR1P18146 543 aa16.14■□□□□ 0.17
COL27A1-207ENST00000494090 ICE1Q9Y2F5 2266 aa16.14■□□□□ 0.17
COL27A1-207ENST00000494090 FBLL1A6NHQ2 334 aaKnown RBP16.14■□□□□ 0.17
COL27A1-207ENST00000494090 LY6G6FQ5SQ64 297 aa16.14■□□□□ 0.17
COL27A1-207ENST00000494090 CACNG8Q8WXS5 425 aa16.14■□□□□ 0.17
COL27A1-207ENST00000494090 NYNRINQ9P2P1 1898 aaKnown RBP16.14■□□□□ 0.17
COL27A1-207ENST00000494090 PMCHL2Q9BQD1 86 aa16.13■□□□□ 0.17
COL27A1-207ENST00000494090 FBXL7Q9UJT9 491 aa16.13■□□□□ 0.17
COL27A1-207ENST00000494090 MTCL1Q9Y4B5 1905 aaKnown RBP16.13■□□□□ 0.17
COL27A1-207ENST00000494090 MBNL2Q5VZF2 373 aaKnown RBP16.13■□□□□ 0.17
COL27A1-207ENST00000494090 PPP1R27Q86WC6 154 aa16.13■□□□□ 0.17
COL27A1-207ENST00000494090 C21orf62Q9NYP8 219 aa16.13■□□□□ 0.17
COL27A1-207ENST00000494090 RNASEH2CQ8TDP1 164 aaKnown RBP16.13■□□□□ 0.17
COL27A1-207ENST00000494090 C17orf100A8MU93 164 aa16.13■□□□□ 0.17
COL27A1-207ENST00000494090 HBBP68871 147 aa16.13■□□□□ 0.17
COL27A1-207ENST00000494090 TFF3Q07654 80 aa16.13■□□□□ 0.17
COL27A1-207ENST00000494090 MEIG1Q5JSS6 88 aa16.13■□□□□ 0.17
COL27A1-207ENST00000494090 OR13A1Q8NGR1 328 aa16.13■□□□□ 0.17
COL27A1-207ENST00000494090 LOC102723996A0A087X1L8 192 aa16.12■□□□□ 0.17
COL27A1-207ENST00000494090 GAGE10A6NGK3 116 aa16.12■□□□□ 0.17
COL27A1-207ENST00000494090 FOXI3A8MTJ6 420 aaPredicted RBP16.12■□□□□ 0.17
COL27A1-207ENST00000494090 HIST1H4GQ99525 98 aa16.12■□□□□ 0.17
COL27A1-207ENST00000494090 MOSP00540 346 aa16.12■□□□□ 0.17
COL27A1-207ENST00000494090 PEAR1Q5VY43 1037 aaPredicted RBP16.12■□□□□ 0.17
COL27A1-207ENST00000494090 FAM89BQ8N5H3 189 aa16.12■□□□□ 0.17
COL27A1-207ENST00000494090 ZIC4Q8N9L1 334 aa16.12■□□□□ 0.17
COL27A1-207ENST00000494090 ZNF418Q8TF45 676 aaPredicted RBP16.12■□□□□ 0.17
COL27A1-207ENST00000494090 NEU1Q99519 415 aa16.12■□□□□ 0.17
COL27A1-207ENST00000494090 PRSS2P07478 247 aa16.12■□□□□ 0.17
COL27A1-207ENST00000494090 ZNF525Q8N782 197 aa16.12■□□□□ 0.17
COL27A1-207ENST00000494090 WDYHV1Q96HA8 205 aa16.12■□□□□ 0.17
COL27A1-207ENST00000494090 TRBV6-7A0A0A0MS04 114 aa16.12■□□□□ 0.17
COL27A1-207ENST00000494090 NBEAP1P0C6P0 100 aa16.12■□□□□ 0.17
COL27A1-207ENST00000494090 LTBRP36941 435 aa16.12■□□□□ 0.17
COL27A1-207ENST00000494090 FAM74A4Q5TZK3 123 aa16.12■□□□□ 0.17
COL27A1-207ENST00000494090 ARPC1AQ92747 370 aa16.12■□□□□ 0.17
COL27A1-207ENST00000494090 FBXL15Q9H469 300 aa16.12■□□□□ 0.17
COL27A1-207ENST00000494090 IL36BQ9NZH7 164 aa16.12■□□□□ 0.17
COL27A1-207ENST00000494090 SCN2AQ99250 2005 aa16.12■□□□□ 0.17
COL27A1-207ENST00000494090 OTOFQ9HC10 1997 aa16.11■□□□□ 0.17
COL27A1-207ENST00000494090 IGHV3OR16-10A0A075B7F0 116 aa16.11■□□□□ 0.17
COL27A1-207ENST00000494090 UMODP07911 640 aa16.11■□□□□ 0.17
COL27A1-207ENST00000494090 GFI1Q99684 422 aa16.11■□□□□ 0.17
COL27A1-207ENST00000494090 A0A087WV48 116 aa16.11■□□□□ 0.17
COL27A1-207ENST00000494090 IGKV1-9A0A0C4DH69 117 aa16.11■□□□□ 0.17
COL27A1-207ENST00000494090 LOC107984156A0A0G2JMH3 177 aa16.11■□□□□ 0.17
COL27A1-207ENST00000494090 H3BTX0 84 aa16.11■□□□□ 0.17
COL27A1-207ENST00000494090 CBLN1P23435 193 aa16.11■□□□□ 0.17
COL27A1-207ENST00000494090 ASIPP42127 132 aa16.11■□□□□ 0.17
COL27A1-207ENST00000494090 PSG7Q13046 419 aa16.11■□□□□ 0.17
COL27A1-207ENST00000494090 DNLZQ5SXM8 178 aa16.11■□□□□ 0.17
COL27A1-207ENST00000494090 ARL17AQ8IVW1 177 aa16.11■□□□□ 0.17
COL27A1-207ENST00000494090 TUBA4BQ9H853 241 aa16.11■□□□□ 0.17
COL27A1-207ENST00000494090 TRBV20OR9-2A0A075B6H5 130 aa16.11■□□□□ 0.17
COL27A1-207ENST00000494090 IGKV1D-33P01593 117 aa16.11■□□□□ 0.17
COL27A1-207ENST00000494090 IGKV1-33P01594 117 aa16.11■□□□□ 0.17
COL27A1-207ENST00000494090 IGHV1-2P23083 117 aa16.11■□□□□ 0.17
COL27A1-207ENST00000494090 SGK494Q96LW2 274 aa16.11■□□□□ 0.17
COL27A1-207ENST00000494090 F8VVB4 439 aa16.11■□□□□ 0.17
COL27A1-207ENST00000494090 F8VWA3 439 aa16.11■□□□□ 0.17
COL27A1-207ENST00000494090 PLAURQ03405 335 aa16.11■□□□□ 0.17
COL27A1-207ENST00000494090 LYZL4Q96KX0 146 aa16.11■□□□□ 0.17
COL27A1-207ENST00000494090 ICAM4Q14773 271 aa16.1■□□□□ 0.17
COL27A1-207ENST00000494090 FAM216BQ8N7L0 139 aa16.1■□□□□ 0.17
COL27A1-207ENST00000494090 WBP1Q96G27 269 aa16.1■□□□□ 0.17
COL27A1-207ENST00000494090 TMEM101Q96IK0 257 aa16.1■□□□□ 0.17
COL27A1-207ENST00000494090 ATRAIDQ6UW56 229 aa16.1■□□□□ 0.17
COL27A1-207ENST00000494090 JMJD8Q96S16 334 aa16.1■□□□□ 0.17
COL27A1-207ENST00000494090 SDF2L1Q9HCN8 221 aa16.1■□□□□ 0.17
COL27A1-207ENST00000494090 SMAD7O15105 426 aaKnown RBP16.1■□□□□ 0.17
COL27A1-207ENST00000494090 TEX45Q8NA69 505 aa16.1■□□□□ 0.17
COL27A1-207ENST00000494090 WFIKKN1Q96NZ8 548 aa16.1■□□□□ 0.17
COL27A1-207ENST00000494090 CHD5Q8TDI0 1954 aa16.1■□□□□ 0.17
COL27A1-207ENST00000494090 CACNA1IQ9P0X4 2223 aa16.1■□□□□ 0.17
COL27A1-207ENST00000494090 REC114Q7Z4M0 266 aa16.1■□□□□ 0.17
COL27A1-207ENST00000494090 OR4D5Q8NGN0 318 aa16.1■□□□□ 0.17
COL27A1-207ENST00000494090 ALKBH7Q9BT30 221 aaPredicted RBP16.1■□□□□ 0.17
COL27A1-207ENST00000494090 SOX21Q9Y651 276 aaPredicted RBP16.1■□□□□ 0.17
COL27A1-207ENST00000494090 SVILO95425 2214 aa16.1■□□□□ 0.17
COL27A1-207ENST00000494090 A0A1B0GW15 77 aa16.09■□□□□ 0.17
COL27A1-207ENST00000494090 IGHV3-48P01763 117 aa16.09■□□□□ 0.17
COL27A1-207ENST00000494090 SOD3P08294 240 aa16.09■□□□□ 0.17
COL27A1-207ENST00000494090 TAS2R60P59551 318 aa16.09■□□□□ 0.17
COL27A1-207ENST00000494090 CGAP01215 116 aa16.09■□□□□ 0.17
COL27A1-207ENST00000494090 IGFBP2P18065 325 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms