RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 STPG3Q8N7X2 389 aa7.9□□□□□ -1.15
NPHP3-209ENST00000493732 OR5AN1Q8NGI8 311 aa7.9□□□□□ -1.15
NPHP3-209ENST00000493732 OR4C13Q8NGP0 309 aa7.9□□□□□ -1.15
NPHP3-209ENST00000493732 OR2T10Q8NGZ9 312 aa7.9□□□□□ -1.15
NPHP3-209ENST00000493732 ZNF596Q8TC21 504 aa7.9□□□□□ -1.15
NPHP3-209ENST00000493732 FLYWCH2Q96CP2 140 aaKnown RBP7.9□□□□□ -1.15
NPHP3-209ENST00000493732 RNF2Q99496 336 aa7.9□□□□□ -1.15
NPHP3-209ENST00000493732 PCGF1Q9BSM1 259 aa7.9□□□□□ -1.15
NPHP3-209ENST00000493732 HINT2Q9BX68 163 aa7.9□□□□□ -1.15
NPHP3-209ENST00000493732 COMMD5Q9GZQ3 224 aa7.9□□□□□ -1.15
NPHP3-209ENST00000493732 TMEM106BQ9NUM4 274 aa7.9□□□□□ -1.15
NPHP3-209ENST00000493732 SLC45A2Q9UMX9 530 aa7.9□□□□□ -1.15
NPHP3-209ENST00000493732 LY96Q9Y6Y9 160 aa7.9□□□□□ -1.15
NPHP3-209ENST00000493732 DSCAML1Q8TD84 2053 aa7.89□□□□□ -1.15
NPHP3-209ENST00000493732 DSCAMO60469 2012 aa7.89□□□□□ -1.15
NPHP3-209ENST00000493732 THBDP07204 575 aa7.89□□□□□ -1.15
NPHP3-209ENST00000493732 AREGP15514 252 aa7.89□□□□□ -1.15
NPHP3-209ENST00000493732 IL3RAP26951 378 aa7.89□□□□□ -1.15
NPHP3-209ENST00000493732 MC5RP33032 325 aa7.89□□□□□ -1.15
NPHP3-209ENST00000493732 GPX4P36969 197 aaPredicted RBP7.89□□□□□ -1.15
NPHP3-209ENST00000493732 SUB1P53999 127 aaKnown RBP eCLIP7.89□□□□□ -1.15
NPHP3-209ENST00000493732 TAS2R45P59539 299 aa7.89□□□□□ -1.15
NPHP3-209ENST00000493732 PRR20EP86478 221 aa7.89□□□□□ -1.15
NPHP3-209ENST00000493732 PRR20CP86479 221 aa7.89□□□□□ -1.15
NPHP3-209ENST00000493732 PRR20DP86480 221 aa7.89□□□□□ -1.15
NPHP3-209ENST00000493732 PRR20BP86481 221 aa7.89□□□□□ -1.15
NPHP3-209ENST00000493732 PRR20AP86496 221 aa7.89□□□□□ -1.15
NPHP3-209ENST00000493732 EFNB3Q15768 340 aa7.89□□□□□ -1.15
NPHP3-209ENST00000493732 DUX4L9Q6RFH8 374 aaPredicted RBP7.89□□□□□ -1.15
NPHP3-209ENST00000493732 SLC16A13Q7RTY0 426 aa7.89□□□□□ -1.15
NPHP3-209ENST00000493732 LINC01551Q86U37 167 aa7.89□□□□□ -1.15
NPHP3-209ENST00000493732 SVIPQ8NHG7 77 aa7.89□□□□□ -1.15
NPHP3-209ENST00000493732 GATAD1Q8WUU5 269 aa7.89□□□□□ -1.15
NPHP3-209ENST00000493732 FRZBQ92765 325 aa7.89□□□□□ -1.15
NPHP3-209ENST00000493732 RNASE6Q93091 150 aaKnown RBP7.89□□□□□ -1.15
NPHP3-209ENST00000493732 ACY3Q96HD9 319 aa7.89□□□□□ -1.15
NPHP3-209ENST00000493732 VKORC1Q9BQB6 163 aa7.89□□□□□ -1.15
NPHP3-209ENST00000493732 DYNLRB1Q9NP97 96 aa7.89□□□□□ -1.15
NPHP3-209ENST00000493732 DYSFO75923 2080 aa7.88□□□□□ -1.15
NPHP3-209ENST00000493732 CADP27708 2225 aa7.88□□□□□ -1.15
NPHP3-209ENST00000493732 TRAV9-1A0A075B6T8 112 aa7.88□□□□□ -1.15
NPHP3-209ENST00000493732 TEX50A0A1B0GTY4 177 aa7.88□□□□□ -1.15
NPHP3-209ENST00000493732 NDUFB4O95168 129 aa7.88□□□□□ -1.15
NPHP3-209ENST00000493732 FABP1P07148 127 aa7.88□□□□□ -1.15
NPHP3-209ENST00000493732 GCHFRP30047 84 aa7.88□□□□□ -1.15
NPHP3-209ENST00000493732 CASP6P55212 293 aa7.88□□□□□ -1.15
NPHP3-209ENST00000493732 GNB1P62873 340 aa7.88□□□□□ -1.15
NPHP3-209ENST00000493732 RPL8P62917 257 aaKnown RBP7.88□□□□□ -1.15
NPHP3-209ENST00000493732 FOXL1Q12952 345 aa7.88□□□□□ -1.15
NPHP3-209ENST00000493732 TBR1Q16650 682 aa7.88□□□□□ -1.15
NPHP3-209ENST00000493732 GCSAMLQ5JQS6 135 aa7.88□□□□□ -1.15
NPHP3-209ENST00000493732 TMEM200BQ69YZ2 307 aa7.88□□□□□ -1.15
NPHP3-209ENST00000493732 Q8NA96 180 aa7.88□□□□□ -1.15
NPHP3-209ENST00000493732 OR10X1Q8NGY0 326 aa7.88□□□□□ -1.15
NPHP3-209ENST00000493732 ABHD5Q8WTS1 349 aa7.88□□□□□ -1.15
NPHP3-209ENST00000493732 TNFRSF14Q92956 283 aa7.88□□□□□ -1.15
NPHP3-209ENST00000493732 HARBI1Q96MB7 349 aa7.88□□□□□ -1.15
NPHP3-209ENST00000493732 TECRQ9NZ01 308 aaKnown RBP7.88□□□□□ -1.15
NPHP3-209ENST00000493732 A0A087X0M5 115 aa7.88□□□□□ -1.15
NPHP3-209ENST00000493732 TRBV23-1A0A0A0MS06 115 aa7.88□□□□□ -1.15
NPHP3-209ENST00000493732 MDFIC2A0A1B0GVS7 189 aa7.88□□□□□ -1.15
NPHP3-209ENST00000493732 A0A1B0GX30 115 aa7.88□□□□□ -1.15
NPHP3-209ENST00000493732 B9A039 149 aa7.88□□□□□ -1.15
NPHP3-209ENST00000493732 H0YJW9 148 aa7.88□□□□□ -1.15
NPHP3-209ENST00000493732 K7ENP7 123 aa7.88□□□□□ -1.15
NPHP3-209ENST00000493732 DLL1O00548 723 aa7.88□□□□□ -1.15
NPHP3-209ENST00000493732 TNFRSF13BO14836 293 aaPredicted RBP7.88□□□□□ -1.15
NPHP3-209ENST00000493732 MMP23AO75900 390 aa7.88□□□□□ -1.15
NPHP3-209ENST00000493732 FSTL3O95633 263 aa7.88□□□□□ -1.15
NPHP3-209ENST00000493732 SAA1P0DJI8 122 aaPredicted RBP7.88□□□□□ -1.15
NPHP3-209ENST00000493732 ATP5G3P48201 142 aa7.88□□□□□ -1.15
NPHP3-209ENST00000493732 ZNF137PP52743 207 aa7.88□□□□□ -1.15
NPHP3-209ENST00000493732 UBE2G2P60604 165 aa7.88□□□□□ -1.15
NPHP3-209ENST00000493732 RPL19P84098 196 aaKnown RBP7.88□□□□□ -1.15
NPHP3-209ENST00000493732 PQLC2Q6ZP29 291 aa7.88□□□□□ -1.15
NPHP3-209ENST00000493732 SPACA3Q8IXA5 215 aa7.88□□□□□ -1.15
NPHP3-209ENST00000493732 HIST3H2BBQ8N257 126 aa7.88□□□□□ -1.15
NPHP3-209ENST00000493732 OR9G1Q8NH87 305 aa7.88□□□□□ -1.15
NPHP3-209ENST00000493732 TMEM167AQ8TBQ9 72 aa7.88□□□□□ -1.15
NPHP3-209ENST00000493732 SSMEM1Q8WWF3 244 aa7.88□□□□□ -1.15
NPHP3-209ENST00000493732 CCL17Q92583 94 aa7.88□□□□□ -1.15
NPHP3-209ENST00000493732 C11orf52Q96A22 123 aa7.88□□□□□ -1.15
NPHP3-209ENST00000493732 FUT9Q9Y231 359 aa7.88□□□□□ -1.15
NPHP3-209ENST00000493732 WASHC3Q9Y3C0 194 aa7.88□□□□□ -1.15
NPHP3-209ENST00000493732 C9JCJ5 164 aa7.87□□□□□ -1.15
NPHP3-209ENST00000493732 PHOX2AO14813 284 aa7.87□□□□□ -1.15
NPHP3-209ENST00000493732 IGKV1-16P04430 117 aa7.87□□□□□ -1.15
NPHP3-209ENST00000493732 NPPCP23582 126 aa7.87□□□□□ -1.15
NPHP3-209ENST00000493732 APOBEC3AP31941 199 aaPredicted RBP7.87□□□□□ -1.15
NPHP3-209ENST00000493732 LGALS7P47929 136 aa7.87□□□□□ -1.15
NPHP3-209ENST00000493732 HLA-DRB5Q30154 266 aa7.87□□□□□ -1.15
NPHP3-209ENST00000493732 VMA21Q3ZAQ7 101 aa7.87□□□□□ -1.15
NPHP3-209ENST00000493732 COA6Q5JTJ3 125 aaKnown RBP7.87□□□□□ -1.15
NPHP3-209ENST00000493732 TMEM183AQ8IXX5 376 aa7.87□□□□□ -1.15
NPHP3-209ENST00000493732 OR4X1Q8NH49 305 aa7.87□□□□□ -1.15
NPHP3-209ENST00000493732 RNASEH2CQ8TDP1 164 aaKnown RBP7.87□□□□□ -1.15
NPHP3-209ENST00000493732 H1FXQ92522 213 aaKnown RBP7.87□□□□□ -1.15
NPHP3-209ENST00000493732 LRFN3Q9BTN0 628 aa7.87□□□□□ -1.15
NPHP3-209ENST00000493732 MRPL32Q9BYC8 188 aaKnown RBP7.87□□□□□ -1.15
NPHP3-209ENST00000493732 NDUFA4L2Q9NRX3 87 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms