RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 SULT1A3P0DMM9 295 aa0.88□□□□□ -2.27
SMC4-223ENST00000493695 SULT1A4P0DMN0 295 aa0.88□□□□□ -2.27
SMC4-223ENST00000493695 RPS12P25398 132 aaKnown RBP0.88□□□□□ -2.27
SMC4-223ENST00000493695 HLA-DMBP28068 263 aa0.88□□□□□ -2.27
SMC4-223ENST00000493695 S100A7P31151 101 aa0.88□□□□□ -2.27
SMC4-223ENST00000493695 FXYD2P54710 66 aa0.88□□□□□ -2.27
SMC4-223ENST00000493695 ELOBQ15370 118 aa0.88□□□□□ -2.27
SMC4-223ENST00000493695 FAM173BQ6P4H8 233 aa0.88□□□□□ -2.27
SMC4-223ENST00000493695 DCXRQ7Z4W1 244 aa0.88□□□□□ -2.27
SMC4-223ENST00000493695 DHFR2Q86XF0 187 aa0.88□□□□□ -2.27
SMC4-223ENST00000493695 GID4Q8IVV7 300 aa0.88□□□□□ -2.27
SMC4-223ENST00000493695 TESCQ96BS2 214 aa0.88□□□□□ -2.27
SMC4-223ENST00000493695 OR51I1Q9H343 314 aa0.88□□□□□ -2.27
SMC4-223ENST00000493695 CRPP02741 224 aa0.87□□□□□ -2.27
SMC4-223ENST00000493695 TRGC1P0CF51 173 aa0.87□□□□□ -2.27
SMC4-223ENST00000493695 CCR7P32248 378 aa0.87□□□□□ -2.27
SMC4-223ENST00000493695 HAAOP46952 286 aa0.87□□□□□ -2.27
SMC4-223ENST00000493695 ZNF80P51504 273 aaPredicted RBP0.87□□□□□ -2.27
SMC4-223ENST00000493695 TPM4P67936 248 aa0.87□□□□□ -2.27
SMC4-223ENST00000493695 RPL18Q07020 188 aaKnown RBP0.87□□□□□ -2.27
SMC4-223ENST00000493695 COTL1Q14019 142 aa0.87□□□□□ -2.27
SMC4-223ENST00000493695 CDKL4Q5MAI5 379 aa0.87□□□□□ -2.27
SMC4-223ENST00000493695 ZNF676Q8N7Q3 588 aa0.87□□□□□ -2.27
SMC4-223ENST00000493695 ZNF439Q8NDP4 499 aa0.87□□□□□ -2.27
SMC4-223ENST00000493695 OR8B3Q8NGG8 313 aa0.87□□□□□ -2.27
SMC4-223ENST00000493695 PTH2Q96A98 100 aa0.87□□□□□ -2.27
SMC4-223ENST00000493695 CNBD2Q96M20 576 aa0.87□□□□□ -2.27
SMC4-223ENST00000493695 PAQR5Q9NXK6 330 aaPredicted RBP0.87□□□□□ -2.27
SMC4-223ENST00000493695 IL36BQ9NZH7 164 aa0.87□□□□□ -2.27
SMC4-223ENST00000493695 SOX21Q9Y651 276 aaPredicted RBP0.87□□□□□ -2.27
SMC4-223ENST00000493695 COL4A5P29400 1685 aa0.87□□□□□ -2.27
SMC4-223ENST00000493695 ORC5O43913 435 aa0.86□□□□□ -2.27
SMC4-223ENST00000493695 NOS1APO75052 506 aaPredicted RBP0.86□□□□□ -2.27
SMC4-223ENST00000493695 OR5G3P0C626 314 aa0.86□□□□□ -2.27
SMC4-223ENST00000493695 KCNE1P15382 129 aa0.86□□□□□ -2.27
SMC4-223ENST00000493695 NFYAP23511 347 aaPredicted RBP0.86□□□□□ -2.27
SMC4-223ENST00000493695 MAGOHP61326 146 aaKnown RBP0.86□□□□□ -2.27
SMC4-223ENST00000493695 CCL20P78556 96 aa0.86□□□□□ -2.27
SMC4-223ENST00000493695 GUK1Q16774 197 aa0.86□□□□□ -2.27
SMC4-223ENST00000493695 IBA57Q5T440 356 aaKnown RBP0.86□□□□□ -2.27
SMC4-223ENST00000493695 GLT8D1Q68CQ7 371 aa0.86□□□□□ -2.27
SMC4-223ENST00000493695 TMEM86BQ8N661 226 aa0.86□□□□□ -2.27
SMC4-223ENST00000493695 ADAT1Q9BUB4 502 aaKnown RBP0.86□□□□□ -2.27
SMC4-223ENST00000493695 EFCAB1Q9HAE3 211 aa0.86□□□□□ -2.27
SMC4-223ENST00000493695 CISHQ9NSE2 258 aa0.86□□□□□ -2.27
SMC4-223ENST00000493695 RALGAPA2Q2PPJ7 1873 aa0.86□□□□□ -2.27
SMC4-223ENST00000493695 IGKV2-40A0A087WW87 121 aaPredicted RBP0.85□□□□□ -2.27
SMC4-223ENST00000493695 A0A0J9YY10 115 aa0.85□□□□□ -2.27
SMC4-223ENST00000493695 A0A1B0GV50 99 aa0.85□□□□□ -2.27
SMC4-223ENST00000493695 A0A1B0GX78 115 aa0.85□□□□□ -2.27
SMC4-223ENST00000493695 IRGMA1A4Y4 181 aa0.85□□□□□ -2.27
SMC4-223ENST00000493695 SLC22A1O15245 554 aa0.85□□□□□ -2.27
SMC4-223ENST00000493695 TGOLN2O43493 480 aa0.85□□□□□ -2.27
SMC4-223ENST00000493695 DCTN3O75935 186 aa0.85□□□□□ -2.27
SMC4-223ENST00000493695 IGKV2D-40P01614 121 aaPredicted RBP0.85□□□□□ -2.27
SMC4-223ENST00000493695 RNASE3P12724 160 aaKnown RBP0.85□□□□□ -2.27
SMC4-223ENST00000493695 AP2S1P53680 142 aaPredicted RBP0.85□□□□□ -2.27
SMC4-223ENST00000493695 SUPT4H1P63272 117 aaKnown RBP0.85□□□□□ -2.27
SMC4-223ENST00000493695 PMAIP1Q13794 54 aa0.85□□□□□ -2.27
SMC4-223ENST00000493695 C15orf53Q8NAA6 179 aa0.85□□□□□ -2.27
SMC4-223ENST00000493695 ERMAPQ96PL5 475 aaPredicted RBP0.85□□□□□ -2.27
SMC4-223ENST00000493695 SETD5Q9C0A6 1442 aa0.85□□□□□ -2.27
SMC4-223ENST00000493695 BAIAP2Q9UQB8 552 aa0.85□□□□□ -2.27
SMC4-223ENST00000493695 SNAPC4Q5SXM2 1469 aa0.85□□□□□ -2.27
SMC4-223ENST00000493695 EVC2Q86UK5 1308 aa0.85□□□□□ -2.27
SMC4-223ENST00000493695 FREM1Q5H8C1 2179 aa0.84□□□□□ -2.27
SMC4-223ENST00000493695 BAZ2BQ9UIF8 2168 aaKnown RBP0.84□□□□□ -2.27
SMC4-223ENST00000493695 IGKV3-7A0A075B6H7 116 aa0.84□□□□□ -2.27
SMC4-223ENST00000493695 PRM2P04554 102 aa0.84□□□□□ -2.27
SMC4-223ENST00000493695 G6PCP35575 357 aa0.84□□□□□ -2.27
SMC4-223ENST00000493695 CTAG1AP78358 180 aa0.84□□□□□ -2.27
SMC4-223ENST00000493695 ZNF345Q14585 488 aa0.84□□□□□ -2.27
SMC4-223ENST00000493695 HIST3H3Q16695 136 aa0.84□□□□□ -2.27
SMC4-223ENST00000493695 NDUFA5Q16718 116 aa0.84□□□□□ -2.27
SMC4-223ENST00000493695 COQ5Q5HYK3 327 aa0.84□□□□□ -2.27
SMC4-223ENST00000493695 RPS19BP1Q86WX3 136 aaKnown RBP0.84□□□□□ -2.27
SMC4-223ENST00000493695 OR2T4Q8NH00 348 aa0.84□□□□□ -2.27
SMC4-223ENST00000493695 SLC35B4Q969S0 331 aa0.84□□□□□ -2.27
SMC4-223ENST00000493695 PCDH15Q96QU1 1955 aa0.83□□□□□ -2.28
SMC4-223ENST00000493695 TRBV20OR9-2A0A075B6H5 130 aa0.83□□□□□ -2.28
SMC4-223ENST00000493695 IGKV1D-43A0A0B4J1Z2 117 aa0.83□□□□□ -2.28
SMC4-223ENST00000493695 FABP5P3A8MUU1 101 aa0.83□□□□□ -2.28
SMC4-223ENST00000493695 HCRTO43612 131 aa0.83□□□□□ -2.28
SMC4-223ENST00000493695 IGKV1-5P01602 117 aa0.83□□□□□ -2.28
SMC4-223ENST00000493695 METTL15P1P0C7V9 234 aa0.83□□□□□ -2.28
SMC4-223ENST00000493695 OR2F1Q13607 317 aa0.83□□□□□ -2.28
SMC4-223ENST00000493695 KISS1Q15726 138 aa0.83□□□□□ -2.28
SMC4-223ENST00000493695 C10orf55Q5SWW7 151 aa0.83□□□□□ -2.28
SMC4-223ENST00000493695 C11orf40Q8WZ69 217 aa0.83□□□□□ -2.28
SMC4-223ENST00000493695 YIPF3Q9GZM5 350 aa0.83□□□□□ -2.28
SMC4-223ENST00000493695 DLG5Q8TDM6 1919 aa0.82□□□□□ -2.28
SMC4-223ENST00000493695 GGT3PA6NGU5 568 aa0.82□□□□□ -2.28
SMC4-223ENST00000493695 SDCBPO00560 298 aaPredicted RBP0.82□□□□□ -2.28
SMC4-223ENST00000493695 HIST1H1EP10412 219 aaKnown RBP0.82□□□□□ -2.28
SMC4-223ENST00000493695 TCL1AP56279 114 aa0.82□□□□□ -2.28
SMC4-223ENST00000493695 CDK5R1Q15078 307 aa0.82□□□□□ -2.28
SMC4-223ENST00000493695 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.82□□□□□ -2.28
SMC4-223ENST00000493695 Q6ZS49 121 aa0.82□□□□□ -2.28
SMC4-223ENST00000493695 LRRC25Q8N386 305 aaPredicted RBP0.82□□□□□ -2.28
SMC4-223ENST00000493695 PFN4Q8NHR9 129 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms