RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 COA4Q9NYJ1 87 aa12.39□□□□□ -0.43
HPS4-216ENST00000493455 GSKIPQ9P0R6 139 aa12.39□□□□□ -0.43
HPS4-216ENST00000493455 A0A1B0GU03 582 aa12.38□□□□□ -0.43
HPS4-216ENST00000493455 A0A1B0GW64 132 aa12.38□□□□□ -0.43
HPS4-216ENST00000493455 TMEM89A2RUT3 159 aa12.38□□□□□ -0.43
HPS4-216ENST00000493455 CGB1A6NKQ9 187 aa12.38□□□□□ -0.43
HPS4-216ENST00000493455 CEBPZOSA8MTT3 80 aa12.38□□□□□ -0.43
HPS4-216ENST00000493455 IGF1P05019 195 aa12.38□□□□□ -0.43
HPS4-216ENST00000493455 FGF2P09038 288 aa12.38□□□□□ -0.43
HPS4-216ENST00000493455 AREGP15514 252 aa12.38□□□□□ -0.43
HPS4-216ENST00000493455 HSPE1P61604 102 aaKnown RBP12.38□□□□□ -0.43
HPS4-216ENST00000493455 SLC35B1P78383 322 aa12.38□□□□□ -0.43
HPS4-216ENST00000493455 AWAT1Q58HT5 328 aa12.38□□□□□ -0.43
HPS4-216ENST00000493455 C19orf35Q6ZS72 473 aa12.38□□□□□ -0.43
HPS4-216ENST00000493455 OR5B3Q8NH48 314 aa12.38□□□□□ -0.43
HPS4-216ENST00000493455 OR10C1Q96KK4 312 aa12.38□□□□□ -0.43
HPS4-216ENST00000493455 PLEKHA3Q9HB20 300 aa12.38□□□□□ -0.43
HPS4-216ENST00000493455 ENY2Q9NPA8 101 aa12.38□□□□□ -0.43
HPS4-216ENST00000493455 MGAT4CQ9UBM8 478 aa12.38□□□□□ -0.43
HPS4-216ENST00000493455 C7orf66A4D0T2 115 aa12.37□□□□□ -0.43
HPS4-216ENST00000493455 TEX22C9J3V5 150 aa12.37□□□□□ -0.43
HPS4-216ENST00000493455 OR13C7P0DN81 318 aa12.37□□□□□ -0.43
HPS4-216ENST00000493455 KHDC1LQ5JSQ8 128 aa12.37□□□□□ -0.43
HPS4-216ENST00000493455 ASPHD1Q5U4P2 390 aa12.37□□□□□ -0.43
HPS4-216ENST00000493455 GSG1LQ6UXU4 331 aa12.37□□□□□ -0.43
HPS4-216ENST00000493455 LCNL1Q6ZST4 164 aa12.37□□□□□ -0.43
HPS4-216ENST00000493455 MS4A10Q96PG2 267 aa12.37□□□□□ -0.43
HPS4-216ENST00000493455 GON7Q9BXV9 100 aa12.37□□□□□ -0.43
HPS4-216ENST00000493455 MAGT1Q9H0U3 335 aa12.37□□□□□ -0.43
HPS4-216ENST00000493455 MED28Q9H204 178 aa12.37□□□□□ -0.43
HPS4-216ENST00000493455 A0A1B0GUS0 222 aa12.36□□□□□ -0.43
HPS4-216ENST00000493455 PRH1P02810 166 aa12.36□□□□□ -0.43
HPS4-216ENST00000493455 PF4V1P10720 104 aa12.36□□□□□ -0.43
HPS4-216ENST00000493455 PRCDQ00LT1 54 aa12.36□□□□□ -0.43
HPS4-216ENST00000493455 DEFA5Q01523 94 aa12.36□□□□□ -0.43
HPS4-216ENST00000493455 C11orf87Q6NUJ2 197 aa12.36□□□□□ -0.43
HPS4-216ENST00000493455 ZNF429Q86V71 674 aa12.36□□□□□ -0.43
HPS4-216ENST00000493455 CADM3Q8N126 398 aa12.36□□□□□ -0.43
HPS4-216ENST00000493455 ZBTB8BQ8NAP8 495 aaPredicted RBP12.36□□□□□ -0.43
HPS4-216ENST00000493455 OR5AU1Q8NGC0 362 aa12.36□□□□□ -0.43
HPS4-216ENST00000493455 NDUFA4L2Q9NRX3 87 aa12.36□□□□□ -0.43
HPS4-216ENST00000493455 ZNF257Q9Y2Q1 563 aa12.36□□□□□ -0.43
HPS4-216ENST00000493455 hCG_2014768A0A024R1R8 64 aa12.35□□□□□ -0.43
HPS4-216ENST00000493455 WRBO00258 174 aa12.35□□□□□ -0.43
HPS4-216ENST00000493455 IAPPP10997 89 aa12.35□□□□□ -0.43
HPS4-216ENST00000493455 DEFA4P12838 97 aa12.35□□□□□ -0.43
HPS4-216ENST00000493455 PROK1P58294 105 aa12.35□□□□□ -0.43
HPS4-216ENST00000493455 SPCS3P61009 180 aa12.35□□□□□ -0.43
HPS4-216ENST00000493455 SRSF4Q08170 494 aaKnown RBP12.35□□□□□ -0.43
HPS4-216ENST00000493455 CXorf66Q5JRM2 361 aaPredicted RBP12.35□□□□□ -0.43
HPS4-216ENST00000493455 C12orf54Q6X4T0 127 aa12.35□□□□□ -0.43
HPS4-216ENST00000493455 WNT10AQ9GZT5 417 aa12.35□□□□□ -0.43
HPS4-216ENST00000493455 RBKSQ9H477 322 aa12.35□□□□□ -0.43
HPS4-216ENST00000493455 IGLC7A0M8Q6 106 aa12.34□□□□□ -0.43
HPS4-216ENST00000493455 SOX15O60248 233 aa12.34□□□□□ -0.43
HPS4-216ENST00000493455 FBXO24O75426 580 aa12.34□□□□□ -0.43
HPS4-216ENST00000493455 CD28P10747 220 aa12.34□□□□□ -0.43
HPS4-216ENST00000493455 SLC25A6P12236 298 aa12.34□□□□□ -0.43
HPS4-216ENST00000493455 PSMB6P28072 239 aa12.34□□□□□ -0.43
HPS4-216ENST00000493455 CRIP2P52943 208 aaPredicted RBP12.34□□□□□ -0.43
HPS4-216ENST00000493455 S100A10P60903 97 aa12.34□□□□□ -0.43
HPS4-216ENST00000493455 WT1-ASQ06250 92 aa12.34□□□□□ -0.43
HPS4-216ENST00000493455 TNFRSF9Q07011 255 aa12.34□□□□□ -0.43
HPS4-216ENST00000493455 AKIRIN2Q53H80 203 aa12.34□□□□□ -0.43
HPS4-216ENST00000493455 TMEM65Q6PI78 240 aa12.34□□□□□ -0.43
HPS4-216ENST00000493455 MRPL41Q8IXM3 137 aaKnown RBP12.34□□□□□ -0.43
HPS4-216ENST00000493455 OR4X2Q8NGF9 303 aa12.34□□□□□ -0.43
HPS4-216ENST00000493455 OR5M8Q8NGP6 311 aa12.34□□□□□ -0.43
HPS4-216ENST00000493455 FAM110DQ8TAY7 271 aaPredicted RBP12.34□□□□□ -0.43
HPS4-216ENST00000493455 C2orf50Q96LR7 162 aa12.34□□□□□ -0.43
HPS4-216ENST00000493455 HEYLQ9NQ87 328 aaPredicted RBP12.34□□□□□ -0.43
HPS4-216ENST00000493455 LSM5Q9Y4Y9 91 aaKnown RBP12.34□□□□□ -0.43
HPS4-216ENST00000493455 A0A1W2PRX2 142 aa12.33□□□□□ -0.44
HPS4-216ENST00000493455 PITX3O75364 302 aa12.33□□□□□ -0.44
HPS4-216ENST00000493455 NKX2-1P43699 371 aaPredicted RBP12.33□□□□□ -0.44
HPS4-216ENST00000493455 TPPP2P59282 170 aa12.33□□□□□ -0.44
HPS4-216ENST00000493455 ERHP84090 104 aaKnown RBP12.33□□□□□ -0.44
HPS4-216ENST00000493455 FCN2Q15485 313 aa12.33□□□□□ -0.44
HPS4-216ENST00000493455 C19orf54Q5BKX5 351 aa12.33□□□□□ -0.44
HPS4-216ENST00000493455 TEX38Q6PEX7 206 aa12.33□□□□□ -0.44
HPS4-216ENST00000493455 OR4D5Q8NGN0 318 aa12.33□□□□□ -0.44
HPS4-216ENST00000493455 DTD1Q8TEA8 209 aa12.33□□□□□ -0.44
HPS4-216ENST00000493455 WFDC12Q8WWY7 111 aa12.33□□□□□ -0.44
HPS4-216ENST00000493455 TMEM68Q96MH6 324 aa12.33□□□□□ -0.44
HPS4-216ENST00000493455 MDFIQ99750 246 aa12.33□□□□□ -0.44
HPS4-216ENST00000493455 HSPB7Q9UBY9 170 aa12.33□□□□□ -0.44
HPS4-216ENST00000493455 PAIP2BQ9ULR5 123 aaKnown RBP12.33□□□□□ -0.44
HPS4-216ENST00000493455 ATRQ13535 2644 aa12.32□□□□□ -0.44
HPS4-216ENST00000493455 SSSCA1O60232 199 aa12.32□□□□□ -0.44
HPS4-216ENST00000493455 TRGV3P03979 118 aa12.32□□□□□ -0.44
HPS4-216ENST00000493455 PPIFP30405 207 aaKnown RBP12.32□□□□□ -0.44
HPS4-216ENST00000493455 SNCAP37840 140 aa12.32□□□□□ -0.44
HPS4-216ENST00000493455 KRTAP10-3P60369 221 aa12.32□□□□□ -0.44
HPS4-216ENST00000493455 POLR2GP62487 172 aaKnown RBP eCLIP12.32□□□□□ -0.44
HPS4-216ENST00000493455 CFHR3Q02985 330 aa12.32□□□□□ -0.44
HPS4-216ENST00000493455 SLC25A24Q6NUK1 477 aa12.32□□□□□ -0.44
HPS4-216ENST00000493455 TTC9CQ8N5M4 171 aa12.32□□□□□ -0.44
HPS4-216ENST00000493455 C3orf56Q8N813 242 aa12.32□□□□□ -0.44
HPS4-216ENST00000493455 OR52E5Q8NH55 327 aa12.32□□□□□ -0.44
HPS4-216ENST00000493455 HIPK2Q9H2X6 1198 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms