RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 MGAT4CQ9UBM8 478 aa13.53□□□□□ -0.24
LIME1-208ENST00000493265 TRAV41A0A0B4J266 112 aa13.52□□□□□ -0.25
LIME1-208ENST00000493265 A0A1B0GW64 132 aa13.52□□□□□ -0.25
LIME1-208ENST00000493265 REG1AP05451 166 aa13.52□□□□□ -0.25
LIME1-208ENST00000493265 HSPE1P61604 102 aaKnown RBP13.52□□□□□ -0.25
LIME1-208ENST00000493265 GSG1LQ6UXU4 331 aa13.52□□□□□ -0.25
LIME1-208ENST00000493265 CENPVQ7Z7K6 275 aaPredicted RBP13.52□□□□□ -0.25
LIME1-208ENST00000493265 STPG2Q8N412 459 aa13.52□□□□□ -0.25
LIME1-208ENST00000493265 MED28Q9H204 178 aa13.52□□□□□ -0.25
LIME1-208ENST00000493265 RNF114Q9Y508 228 aa13.52□□□□□ -0.25
LIME1-208ENST00000493265 PLXNB1O43157 2135 aa13.51□□□□□ -0.25
LIME1-208ENST00000493265 CGB1A6NKQ9 187 aa13.51□□□□□ -0.25
LIME1-208ENST00000493265 CEBPZOSA8MTT3 80 aa13.51□□□□□ -0.25
LIME1-208ENST00000493265 TEX22C9J3V5 150 aa13.51□□□□□ -0.25
LIME1-208ENST00000493265 SCGB1D2O95969 90 aa13.51□□□□□ -0.25
LIME1-208ENST00000493265 FGF2P09038 288 aa13.51□□□□□ -0.25
LIME1-208ENST00000493265 TMEM267Q0VDI3 215 aaPredicted RBP13.51□□□□□ -0.25
LIME1-208ENST00000493265 ZNF329Q86UD4 541 aa13.51□□□□□ -0.25
LIME1-208ENST00000493265 ZNF429Q86V71 674 aa13.51□□□□□ -0.25
LIME1-208ENST00000493265 OR5T1Q8NG75 326 aa13.51□□□□□ -0.25
LIME1-208ENST00000493265 OR5B3Q8NH48 314 aa13.51□□□□□ -0.25
LIME1-208ENST00000493265 NDUFA4L2Q9NRX3 87 aa13.51□□□□□ -0.25
LIME1-208ENST00000493265 hCG_2014768A0A024R1R8 64 aa13.5□□□□□ -0.25
LIME1-208ENST00000493265 A0A1W2PN81 502 aa13.5□□□□□ -0.25
LIME1-208ENST00000493265 CLPSL1A2RUU4 121 aa13.5□□□□□ -0.25
LIME1-208ENST00000493265 IGF1P05019 195 aa13.5□□□□□ -0.25
LIME1-208ENST00000493265 SLC25A6P12236 298 aa13.5□□□□□ -0.25
LIME1-208ENST00000493265 AREGP15514 252 aa13.5□□□□□ -0.25
LIME1-208ENST00000493265 CHRNA7P36544 502 aa13.5□□□□□ -0.25
LIME1-208ENST00000493265 HOXA1P49639 335 aaPredicted RBP13.5□□□□□ -0.25
LIME1-208ENST00000493265 CXorf66Q5JRM2 361 aaPredicted RBP13.5□□□□□ -0.25
LIME1-208ENST00000493265 ASPHD1Q5U4P2 390 aa13.5□□□□□ -0.25
LIME1-208ENST00000493265 C10orf99Q6UWK7 81 aa13.5□□□□□ -0.25
LIME1-208ENST00000493265 C19orf35Q6ZS72 473 aa13.5□□□□□ -0.25
LIME1-208ENST00000493265 KLHDC1Q8N7A1 406 aa13.5□□□□□ -0.25
LIME1-208ENST00000493265 ZBTB8BQ8NAP8 495 aaPredicted RBP13.5□□□□□ -0.25
LIME1-208ENST00000493265 MAGT1Q9H0U3 335 aa13.5□□□□□ -0.25
LIME1-208ENST00000493265 PLEKHA3Q9HB20 300 aa13.5□□□□□ -0.25
LIME1-208ENST00000493265 ENY2Q9NPA8 101 aa13.5□□□□□ -0.25
LIME1-208ENST00000493265 COA4Q9NYJ1 87 aa13.5□□□□□ -0.25
LIME1-208ENST00000493265 ZNF257Q9Y2Q1 563 aa13.5□□□□□ -0.25
LIME1-208ENST00000493265 TET2Q6N021 2002 aaPredicted RBP13.49□□□□□ -0.25
LIME1-208ENST00000493265 PSMB11A5LHX3 300 aa13.49□□□□□ -0.25
LIME1-208ENST00000493265 OR13C7P0DN81 318 aa13.49□□□□□ -0.25
LIME1-208ENST00000493265 SPCS3P61009 180 aa13.49□□□□□ -0.25
LIME1-208ENST00000493265 PRCDQ00LT1 54 aa13.49□□□□□ -0.25
LIME1-208ENST00000493265 FOXL1Q12952 345 aa13.49□□□□□ -0.25
LIME1-208ENST00000493265 FCN2Q15485 313 aa13.49□□□□□ -0.25
LIME1-208ENST00000493265 C11orf87Q6NUJ2 197 aa13.49□□□□□ -0.25
LIME1-208ENST00000493265 Q6ZNX1 250 aa13.49□□□□□ -0.25
LIME1-208ENST00000493265 OR5M8Q8NGP6 311 aa13.49□□□□□ -0.25
LIME1-208ENST00000493265 C2orf50Q96LR7 162 aa13.49□□□□□ -0.25
LIME1-208ENST00000493265 RBKSQ9H477 322 aa13.49□□□□□ -0.25
LIME1-208ENST00000493265 ZNF355PQ9NSJ1 428 aa13.49□□□□□ -0.25
LIME1-208ENST00000493265 PKD1L1Q8TDX9 2849 aa13.48□□□□□ -0.25
LIME1-208ENST00000493265 IGLC7A0M8Q6 106 aa13.48□□□□□ -0.25
LIME1-208ENST00000493265 PITX3O75364 302 aa13.48□□□□□ -0.25
LIME1-208ENST00000493265 SLC35B1P78383 322 aa13.48□□□□□ -0.25
LIME1-208ENST00000493265 TNFRSF9Q07011 255 aa13.48□□□□□ -0.25
LIME1-208ENST00000493265 AKIRIN2Q53H80 203 aa13.48□□□□□ -0.25
LIME1-208ENST00000493265 AWAT1Q58HT5 328 aa13.48□□□□□ -0.25
LIME1-208ENST00000493265 GON7Q9BXV9 100 aa13.48□□□□□ -0.25
LIME1-208ENST00000493265 TNCP24821 2201 aa13.48□□□□□ -0.25
LIME1-208ENST00000493265 WRBO00258 174 aa13.47□□□□□ -0.25
LIME1-208ENST00000493265 PRH1P02810 166 aa13.47□□□□□ -0.25
LIME1-208ENST00000493265 IAPPP10997 89 aa13.47□□□□□ -0.25
LIME1-208ENST00000493265 CXCL3P19876 107 aa13.47□□□□□ -0.25
LIME1-208ENST00000493265 NKX2-1P43699 371 aaPredicted RBP13.47□□□□□ -0.25
LIME1-208ENST00000493265 CRIP2P52943 208 aaPredicted RBP13.47□□□□□ -0.25
LIME1-208ENST00000493265 RRAS2P62070 204 aaPredicted RBP13.47□□□□□ -0.25
LIME1-208ENST00000493265 WT1-ASQ06250 92 aa13.47□□□□□ -0.25
LIME1-208ENST00000493265 HIST2H2BDQ6DRA6 164 aa13.47□□□□□ -0.25
LIME1-208ENST00000493265 LCNL1Q6ZST4 164 aa13.47□□□□□ -0.25
LIME1-208ENST00000493265 C11orf44Q8N8P7 122 aa13.47□□□□□ -0.25
LIME1-208ENST00000493265 OR5AU1Q8NGC0 362 aa13.47□□□□□ -0.25
LIME1-208ENST00000493265 OR4D5Q8NGN0 318 aa13.47□□□□□ -0.25
LIME1-208ENST00000493265 OR52E5Q8NH55 327 aa13.47□□□□□ -0.25
LIME1-208ENST00000493265 WDR89Q96FK6 387 aaPredicted RBP13.47□□□□□ -0.25
LIME1-208ENST00000493265 MS4A10Q96PG2 267 aa13.47□□□□□ -0.25
LIME1-208ENST00000493265 HEYLQ9NQ87 328 aaPredicted RBP13.47□□□□□ -0.25
LIME1-208ENST00000493265 HSPB7Q9UBY9 170 aa13.47□□□□□ -0.25
LIME1-208ENST00000493265 PF4V1P10720 104 aa13.46□□□□□ -0.25
LIME1-208ENST00000493265 DEFA4P12838 97 aa13.46□□□□□ -0.25
LIME1-208ENST00000493265 PSMB6P28072 239 aa13.46□□□□□ -0.25
LIME1-208ENST00000493265 H2BFSP57053 126 aa13.46□□□□□ -0.25
LIME1-208ENST00000493265 S100A10P60903 97 aa13.46□□□□□ -0.25
LIME1-208ENST00000493265 POLR2GP62487 172 aaKnown RBP eCLIP13.46□□□□□ -0.25
LIME1-208ENST00000493265 AARDQ4LEZ3 155 aa13.46□□□□□ -0.25
LIME1-208ENST00000493265 C19orf54Q5BKX5 351 aa13.46□□□□□ -0.25
LIME1-208ENST00000493265 MRPL41Q8IXM3 137 aaKnown RBP13.46□□□□□ -0.25
LIME1-208ENST00000493265 OR11H7Q8NGC8 314 aa13.46□□□□□ -0.25
LIME1-208ENST00000493265 DTD1Q8TEA8 209 aa13.46□□□□□ -0.25
LIME1-208ENST00000493265 WNT10AQ9GZT5 417 aa13.46□□□□□ -0.25
LIME1-208ENST00000493265 LSM5Q9Y4Y9 91 aaKnown RBP13.46□□□□□ -0.25
LIME1-208ENST00000493265 A0A1B0GUS0 222 aa13.45□□□□□ -0.26
LIME1-208ENST00000493265 SSSCA1O60232 199 aa13.45□□□□□ -0.26
LIME1-208ENST00000493265 SOX15O60248 233 aa13.45□□□□□ -0.26
LIME1-208ENST00000493265 PROK1P58294 105 aa13.45□□□□□ -0.26
LIME1-208ENST00000493265 ERHP84090 104 aaKnown RBP13.45□□□□□ -0.26
LIME1-208ENST00000493265 DEFA5Q01523 94 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms