RNA–Protein interactions for RNA: ENST00000492170.1

MRPL55-231, Transcript of mitochondrial ribosomal protein L55, human

TSL 5

Gene MRPL55, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-231	ENST00000492170	ZBTB34	Q8NCN2	500 aa		11.55	□□□□□ -0.56
MRPL55-231	ENST00000492170	OR4A5	Q8NH83	315 aa		11.55	□□□□□ -0.56
MRPL55-231	ENST00000492170	MCFD2	Q8NI22	146 aa		11.55	□□□□□ -0.56
MRPL55-231	ENST00000492170	SECTM1	Q8WVN6	248 aa		11.55	□□□□□ -0.56
MRPL55-231	ENST00000492170	MOB3A	Q96BX8	217 aa		11.55	□□□□□ -0.56
MRPL55-231	ENST00000492170	WDR89	Q96FK6	387 aa	Predicted RBP	11.55	□□□□□ -0.56
MRPL55-231	ENST00000492170	DIRAS2	Q96HU8	199 aa		11.55	□□□□□ -0.56
MRPL55-231	ENST00000492170	CCDC140	Q96MF4	163 aa		11.55	□□□□□ -0.56
MRPL55-231	ENST00000492170	FANCD2OS	Q96PS1	177 aa		11.55	□□□□□ -0.56
MRPL55-231	ENST00000492170	SOST	Q9BQB4	213 aa		11.55	□□□□□ -0.56
MRPL55-231	ENST00000492170	AIFM2	Q9BRQ8	373 aa		11.55	□□□□□ -0.56
MRPL55-231	ENST00000492170	KLK11	Q9UBX7	282 aa		11.55	□□□□□ -0.56
MRPL55-231	ENST00000492170		S4R3C0	116 aa		11.55	□□□□□ -0.56
MRPL55-231	ENST00000492170		A0A1B0GW64	132 aa		11.54	□□□□□ -0.56
MRPL55-231	ENST00000492170	TNFSF12	O43508	249 aa		11.54	□□□□□ -0.56
MRPL55-231	ENST00000492170	CTRB1	P17538	263 aa		11.54	□□□□□ -0.56
MRPL55-231	ENST00000492170	HLA-G	P17693	338 aa		11.54	□□□□□ -0.56
MRPL55-231	ENST00000492170	CBLN1	P23435	193 aa		11.54	□□□□□ -0.56
MRPL55-231	ENST00000492170	BRWD1-AS2	P59051	145 aa		11.54	□□□□□ -0.56
MRPL55-231	ENST00000492170	SSBP1	Q04837	148 aa	Known RBP	11.54	□□□□□ -0.56
MRPL55-231	ENST00000492170	ZNF57	Q68EA5	555 aa	Predicted RBP	11.54	□□□□□ -0.56
MRPL55-231	ENST00000492170	CTRB2	Q6GPI1	263 aa		11.54	□□□□□ -0.56
MRPL55-231	ENST00000492170	OR4A47	Q6IF82	309 aa		11.54	□□□□□ -0.56
MRPL55-231	ENST00000492170	SMIM4	Q8WVI0	70 aa		11.54	□□□□□ -0.56
MRPL55-231	ENST00000492170	CACNG8	Q8WXS5	425 aa		11.54	□□□□□ -0.56
MRPL55-231	ENST00000492170	GPHA2	Q96T91	129 aa		11.54	□□□□□ -0.56
MRPL55-231	ENST00000492170	ZNF2	Q9BSG1	426 aa	Predicted RBP	11.54	□□□□□ -0.56
MRPL55-231	ENST00000492170	HRASLS	Q9HDD0	168 aa		11.54	□□□□□ -0.56
MRPL55-231	ENST00000492170	CCL28	Q9NRJ3	127 aa		11.54	□□□□□ -0.56
MRPL55-231	ENST00000492170	BET1L	Q9NYM9	111 aa		11.54	□□□□□ -0.56
MRPL55-231	ENST00000492170	HYDIN	Q4G0P3	5121 aa		11.54	□□□□□ -0.56
MRPL55-231	ENST00000492170	TRBV7-1	A0A0A6YYK4	115 aa		11.53	□□□□□ -0.56
MRPL55-231	ENST00000492170	ZNF320	A2RRD8	509 aa		11.53	□□□□□ -0.56
MRPL55-231	ENST00000492170	TMEM213	A2RRL7	107 aa		11.53	□□□□□ -0.56
MRPL55-231	ENST00000492170		A8MWP6	167 aa		11.53	□□□□□ -0.56
MRPL55-231	ENST00000492170	REG1A	P05451	166 aa		11.53	□□□□□ -0.56
MRPL55-231	ENST00000492170	TBP	P20226	339 aa		11.53	□□□□□ -0.56
MRPL55-231	ENST00000492170	GNRHR	P30968	328 aa		11.53	□□□□□ -0.56
MRPL55-231	ENST00000492170	TNFSF8	P32971	234 aa		11.53	□□□□□ -0.56
MRPL55-231	ENST00000492170	FXYD4	P59646	89 aa		11.53	□□□□□ -0.56
MRPL55-231	ENST00000492170	HERV-K104	P61576	105 aa		11.53	□□□□□ -0.56
MRPL55-231	ENST00000492170	CATR1	Q13166	79 aa		11.53	□□□□□ -0.56
MRPL55-231	ENST00000492170	KLK9	Q2XQG4	91 aa		11.53	□□□□□ -0.56
MRPL55-231	ENST00000492170	RNASE12	Q5GAN4	147 aa	Known RBP	11.53	□□□□□ -0.56
MRPL55-231	ENST00000492170	ZNF818P	Q6ZRF7	136 aa		11.53	□□□□□ -0.56
MRPL55-231	ENST00000492170	TMEM61	Q8N0U2	210 aa		11.53	□□□□□ -0.56
MRPL55-231	ENST00000492170	SPAG16	Q8N0X2	631 aa		11.53	□□□□□ -0.56
MRPL55-231	ENST00000492170	OR6F1	Q8NGZ6	308 aa		11.53	□□□□□ -0.56
MRPL55-231	ENST00000492170	FCAMR	Q8WWV6	532 aa		11.53	□□□□□ -0.56
MRPL55-231	ENST00000492170	BORCS5	Q969J3	196 aa		11.53	□□□□□ -0.56
MRPL55-231	ENST00000492170	CXorf58	Q96LI9	332 aa		11.53	□□□□□ -0.56
MRPL55-231	ENST00000492170	SLC5A7	Q9GZV3	580 aa		11.53	□□□□□ -0.56
MRPL55-231	ENST00000492170	FXYD6	Q9H0Q3	95 aa		11.53	□□□□□ -0.56
MRPL55-231	ENST00000492170	NDUFA13	Q9P0J0	144 aa		11.53	□□□□□ -0.56
MRPL55-231	ENST00000492170	KLK9	Q9UKQ9	250 aa		11.53	□□□□□ -0.56
MRPL55-231	ENST00000492170	IGLV11-55	A0A075B6I3	123 aa		11.52	□□□□□ -0.57
MRPL55-231	ENST00000492170	RBFOX2	O43251	390 aa	Known RBP eCLIP	11.52	□□□□□ -0.57
MRPL55-231	ENST00000492170	CD74	P04233	296 aa		11.52	□□□□□ -0.57
MRPL55-231	ENST00000492170	MYOD1	P15172	320 aa		11.52	□□□□□ -0.57
MRPL55-231	ENST00000492170	TAS2R31	P59538	309 aa		11.52	□□□□□ -0.57
MRPL55-231	ENST00000492170	ANKRD55	Q3KP44	614 aa		11.52	□□□□□ -0.57
MRPL55-231	ENST00000492170	TMEM17	Q86X19	198 aa		11.52	□□□□□ -0.57
MRPL55-231	ENST00000492170	UXS1	Q8NBZ7	420 aa		11.52	□□□□□ -0.57
MRPL55-231	ENST00000492170	OR52B4	Q8NGK2	314 aa		11.52	□□□□□ -0.57
MRPL55-231	ENST00000492170	ALMS1	Q8TCU4	4167 aa		11.51	□□□□□ -0.57
MRPL55-231	ENST00000492170	MFSD2B	A6NFX1	497 aa		11.51	□□□□□ -0.57
MRPL55-231	ENST00000492170	GSTZ1	O43708	216 aa	Predicted RBP	11.51	□□□□□ -0.57
MRPL55-231	ENST00000492170	NQO2	P16083	231 aa		11.51	□□□□□ -0.57
MRPL55-231	ENST00000492170	IL18	Q14116	193 aa		11.51	□□□□□ -0.57
MRPL55-231	ENST00000492170	TMEM229B	Q8NBD8	167 aa		11.51	□□□□□ -0.57
MRPL55-231	ENST00000492170	MARC2	Q969Z3	335 aa		11.51	□□□□□ -0.57
MRPL55-231	ENST00000492170	DGCR14	Q96DF8	476 aa	Known RBP	11.51	□□□□□ -0.57
MRPL55-231	ENST00000492170	THYN1	Q9P016	225 aa		11.51	□□□□□ -0.57
MRPL55-231	ENST00000492170	MLX	Q9UH92	298 aa		11.51	□□□□□ -0.57
MRPL55-231	ENST00000492170	SELENOK	Q9Y6D0	94 aa		11.51	□□□□□ -0.57
MRPL55-231	ENST00000492170	CGB1	A6NKQ9	187 aa		11.5	□□□□□ -0.57
MRPL55-231	ENST00000492170		M0QYG6	137 aa		11.5	□□□□□ -0.57
MRPL55-231	ENST00000492170	SCAF4	O95104	1147 aa	Known RBP	11.5	□□□□□ -0.57
MRPL55-231	ENST00000492170	HPRT1	P00492	218 aa		11.5	□□□□□ -0.57
MRPL55-231	ENST00000492170	CD3D	P04234	171 aa		11.5	□□□□□ -0.57
MRPL55-231	ENST00000492170	CLEC3B	P05452	202 aa		11.5	□□□□□ -0.57
MRPL55-231	ENST00000492170	UCP3	P55916	312 aa		11.5	□□□□□ -0.57
MRPL55-231	ENST00000492170	TAS2R19	P59542	299 aa		11.5	□□□□□ -0.57
MRPL55-231	ENST00000492170	OR2B8P	P59922	312 aa		11.5	□□□□□ -0.57
MRPL55-231	ENST00000492170	RNASE10	Q5GAN6	216 aa	Known RBP	11.5	□□□□□ -0.57
MRPL55-231	ENST00000492170	AADACL3	Q5VUY0	350 aa		11.5	□□□□□ -0.57
MRPL55-231	ENST00000492170	BTNL8	Q6UX41	500 aa		11.5	□□□□□ -0.57
MRPL55-231	ENST00000492170	LHFPL1	Q86WI0	220 aa		11.5	□□□□□ -0.57
MRPL55-231	ENST00000492170	ARRDC1	Q8N5I2	433 aa		11.5	□□□□□ -0.57
MRPL55-231	ENST00000492170	SRSF8	Q9BRL6	282 aa	Known RBP	11.5	□□□□□ -0.57
MRPL55-231	ENST00000492170	GGTLC1	Q9BX51	225 aa		11.5	□□□□□ -0.57
MRPL55-231	ENST00000492170	COMMD5	Q9GZQ3	224 aa		11.5	□□□□□ -0.57
MRPL55-231	ENST00000492170		V9GYH0	126 aa		11.5	□□□□□ -0.57
MRPL55-231	ENST00000492170	TRAV25	A0A0B4J276	109 aa		11.49	□□□□□ -0.57
MRPL55-231	ENST00000492170	IGLC7	A0M8Q6	106 aa		11.49	□□□□□ -0.57
MRPL55-231	ENST00000492170	UPK2	O00526	184 aa		11.49	□□□□□ -0.57
MRPL55-231	ENST00000492170	CYB5B	O43169	146 aa		11.49	□□□□□ -0.57
MRPL55-231	ENST00000492170	GPR183	P32249	361 aa		11.49	□□□□□ -0.57
MRPL55-231	ENST00000492170	TSPAN5	P62079	268 aa		11.49	□□□□□ -0.57
MRPL55-231	ENST00000492170	POU2AF1	Q16633	256 aa		11.49	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 147.8 ms