RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 TM4SF20Q53R12 229 aa6.26□□□□□ -1.41
SMARCB1-207ENST00000491967 OR1L8Q8NGR8 309 aa6.26□□□□□ -1.41
SMARCB1-207ENST00000491967 OR51H1Q8NH63 302 aa6.26□□□□□ -1.41
SMARCB1-207ENST00000491967 IL17DQ8TAD2 202 aa6.26□□□□□ -1.41
SMARCB1-207ENST00000491967 GPX8Q8TED1 209 aa6.26□□□□□ -1.41
SMARCB1-207ENST00000491967 DYNLRB2Q8TF09 96 aa6.26□□□□□ -1.41
SMARCB1-207ENST00000491967 FCAMRQ8WWV6 532 aa6.26□□□□□ -1.41
SMARCB1-207ENST00000491967 CACNG8Q8WXS5 425 aa6.26□□□□□ -1.41
SMARCB1-207ENST00000491967 SLC25A46Q96AG3 418 aa6.26□□□□□ -1.41
SMARCB1-207ENST00000491967 DGCR14Q96DF8 476 aaKnown RBP6.26□□□□□ -1.41
SMARCB1-207ENST00000491967 COMMD5Q9GZQ3 224 aa6.26□□□□□ -1.41
SMARCB1-207ENST00000491967 WFDC10AQ9H1F0 79 aa6.26□□□□□ -1.41
SMARCB1-207ENST00000491967 C5orf66Q9H5L9 145 aa6.26□□□□□ -1.41
SMARCB1-207ENST00000491967 PALMDQ9NP74 551 aa6.26□□□□□ -1.41
SMARCB1-207ENST00000491967 TMEM14BQ9NUH8 114 aa6.26□□□□□ -1.41
SMARCB1-207ENST00000491967 THYN1Q9P016 225 aa6.26□□□□□ -1.41
SMARCB1-207ENST00000491967 S4R3C0 116 aa6.26□□□□□ -1.41
SMARCB1-207ENST00000491967 LYSTQ99698 3801 aa6.26□□□□□ -1.41
SMARCB1-207ENST00000491967 A0A087WXM4 84 aa6.25□□□□□ -1.41
SMARCB1-207ENST00000491967 MEIS3P1A6NDR6 274 aa6.25□□□□□ -1.41
SMARCB1-207ENST00000491967 K7EMT4 169 aa6.25□□□□□ -1.41
SMARCB1-207ENST00000491967 GPR31O00270 319 aa6.25□□□□□ -1.41
SMARCB1-207ENST00000491967 APOA1P02647 267 aa6.25□□□□□ -1.41
SMARCB1-207ENST00000491967 TRAPPC2P0DI81 140 aa6.25□□□□□ -1.41
SMARCB1-207ENST00000491967 TRAPPC2BP0DI82 140 aa6.25□□□□□ -1.41
SMARCB1-207ENST00000491967 OR13C7P0DN81 318 aa6.25□□□□□ -1.41
SMARCB1-207ENST00000491967 PRSS3P35030 304 aa6.25□□□□□ -1.41
SMARCB1-207ENST00000491967 LPAR6P43657 344 aa6.25□□□□□ -1.41
SMARCB1-207ENST00000491967 UCP3P55916 312 aa6.25□□□□□ -1.41
SMARCB1-207ENST00000491967 FXYD4P59646 89 aa6.25□□□□□ -1.41
SMARCB1-207ENST00000491967 ANKRD55Q3KP44 614 aa6.25□□□□□ -1.41
SMARCB1-207ENST00000491967 TMEM69Q5SWH9 247 aa6.25□□□□□ -1.41
SMARCB1-207ENST00000491967 AADACL3Q5VUY0 350 aa6.25□□□□□ -1.41
SMARCB1-207ENST00000491967 ZFAND6Q6FIF0 208 aa6.25□□□□□ -1.41
SMARCB1-207ENST00000491967 SPSB3Q6PJ21 355 aa6.25□□□□□ -1.41
SMARCB1-207ENST00000491967 SLC16A13Q7RTY0 426 aa6.25□□□□□ -1.41
SMARCB1-207ENST00000491967 WFDC3Q8IUB2 231 aa6.25□□□□□ -1.41
SMARCB1-207ENST00000491967 SAMD12Q8N8I0 201 aa6.25□□□□□ -1.41
SMARCB1-207ENST00000491967 TSPAN14Q8NG11 270 aa6.25□□□□□ -1.41
SMARCB1-207ENST00000491967 OR5B3Q8NH48 314 aa6.25□□□□□ -1.41
SMARCB1-207ENST00000491967 TMEM190Q8WZ59 177 aa6.25□□□□□ -1.41
SMARCB1-207ENST00000491967 FAM110AQ9BQ89 295 aa6.25□□□□□ -1.41
SMARCB1-207ENST00000491967 ZNF2Q9BSG1 426 aaPredicted RBP6.25□□□□□ -1.41
SMARCB1-207ENST00000491967 SRD5A3Q9H8P0 318 aa6.25□□□□□ -1.41
SMARCB1-207ENST00000491967 SCPEP1Q9HB40 452 aa6.25□□□□□ -1.41
SMARCB1-207ENST00000491967 RETNQ9HD89 108 aa6.25□□□□□ -1.41
SMARCB1-207ENST00000491967 GAR1Q9NY12 217 aaKnown RBP6.25□□□□□ -1.41
SMARCB1-207ENST00000491967 EHFQ9NZC4 300 aa6.25□□□□□ -1.41
SMARCB1-207ENST00000491967 UFC1Q9Y3C8 167 aa6.25□□□□□ -1.41
SMARCB1-207ENST00000491967 F11RQ9Y624 299 aaKnown RBP6.25□□□□□ -1.41
SMARCB1-207ENST00000491967 ZNF320A2RRD8 509 aa6.24□□□□□ -1.41
SMARCB1-207ENST00000491967 K7EIM0 57 aa6.24□□□□□ -1.41
SMARCB1-207ENST00000491967 TSPAN4O14817 238 aa6.24□□□□□ -1.41
SMARCB1-207ENST00000491967 TGOLN2O43493 480 aa6.24□□□□□ -1.41
SMARCB1-207ENST00000491967 KRASP01116 189 aa6.24□□□□□ -1.41
SMARCB1-207ENST00000491967 PMP2P02689 132 aa6.24□□□□□ -1.41
SMARCB1-207ENST00000491967 RLN1P04808 185 aa6.24□□□□□ -1.41
SMARCB1-207ENST00000491967 EIF4EP06730 217 aaKnown RBP6.24□□□□□ -1.41
SMARCB1-207ENST00000491967 FCER2P06734 321 aa6.24□□□□□ -1.41
SMARCB1-207ENST00000491967 CTSGP08311 255 aa6.24□□□□□ -1.41
SMARCB1-207ENST00000491967 FCGR2BP31994 310 aaPredicted RBP6.24□□□□□ -1.41
SMARCB1-207ENST00000491967 GPR183P32249 361 aa6.24□□□□□ -1.41
SMARCB1-207ENST00000491967 ADMP35318 185 aa6.24□□□□□ -1.41
SMARCB1-207ENST00000491967 HERV-K104P61576 105 aa6.24□□□□□ -1.41
SMARCB1-207ENST00000491967 GUCA2BQ16661 112 aa6.24□□□□□ -1.41
SMARCB1-207ENST00000491967 PLET1Q6UQ28 207 aa6.24□□□□□ -1.41
SMARCB1-207ENST00000491967 TMEM17Q86X19 198 aa6.24□□□□□ -1.41
SMARCB1-207ENST00000491967 CMTM1Q8IZ96 169 aa6.24□□□□□ -1.41
SMARCB1-207ENST00000491967 DMBX1Q8NFW5 382 aa6.24□□□□□ -1.41
SMARCB1-207ENST00000491967 OR1L6Q8NGR2 347 aa6.24□□□□□ -1.41
SMARCB1-207ENST00000491967 OR5H2Q8NGV7 314 aa6.24□□□□□ -1.41
SMARCB1-207ENST00000491967 OR6F1Q8NGZ6 308 aa6.24□□□□□ -1.41
SMARCB1-207ENST00000491967 OR1P1Q8NH06 330 aa6.24□□□□□ -1.41
SMARCB1-207ENST00000491967 SCARB1Q8WTV0 552 aa6.24□□□□□ -1.41
SMARCB1-207ENST00000491967 LSM10Q969L4 123 aaKnown RBP6.24□□□□□ -1.41
SMARCB1-207ENST00000491967 BSCL2Q96G97 398 aaPredicted RBP6.24□□□□□ -1.41
SMARCB1-207ENST00000491967 SEC22AQ96IW7 307 aa6.24□□□□□ -1.41
SMARCB1-207ENST00000491967 SPAG8Q99932 426 aaPredicted RBP6.24□□□□□ -1.41
SMARCB1-207ENST00000491967 OVOL2Q9BRP0 275 aa6.24□□□□□ -1.41
SMARCB1-207ENST00000491967 FXYD6Q9H0Q3 95 aa6.24□□□□□ -1.41
SMARCB1-207ENST00000491967 IFT46Q9NQC8 304 aa6.24□□□□□ -1.41
SMARCB1-207ENST00000491967 DAZ1Q9NQZ3 744 aaKnown RBP6.24□□□□□ -1.41
SMARCB1-207ENST00000491967 FKBP11Q9NYL4 201 aa6.24□□□□□ -1.41
SMARCB1-207ENST00000491967 PRNDQ9UKY0 176 aa6.24□□□□□ -1.41
SMARCB1-207ENST00000491967 DBX1A6NMT0 343 aa6.23□□□□□ -1.41
SMARCB1-207ENST00000491967 C15orf62A8K5M9 175 aa6.23□□□□□ -1.41
SMARCB1-207ENST00000491967 INS-IGF2F8WCM5 200 aa6.23□□□□□ -1.41
SMARCB1-207ENST00000491967 I3L2K1 104 aa6.23□□□□□ -1.41
SMARCB1-207ENST00000491967 NDUFA4O00483 81 aa6.23□□□□□ -1.41
SMARCB1-207ENST00000491967 CYB5BO43169 146 aa6.23□□□□□ -1.41
SMARCB1-207ENST00000491967 TNFAIP8O95379 198 aa6.23□□□□□ -1.41
SMARCB1-207ENST00000491967 IGKV1-39P01597 117 aa6.23□□□□□ -1.41
SMARCB1-207ENST00000491967 IGKV1D-39P04432 117 aa6.23□□□□□ -1.41
SMARCB1-207ENST00000491967 P0C879 139 aa6.23□□□□□ -1.41
SMARCB1-207ENST00000491967 ATF4P18848 351 aaPredicted RBP6.23□□□□□ -1.41
SMARCB1-207ENST00000491967 HRH1P35367 487 aa6.23□□□□□ -1.41
SMARCB1-207ENST00000491967 G6PCP35575 357 aa6.23□□□□□ -1.41
SMARCB1-207ENST00000491967 ERVK-16P61578 105 aa6.23□□□□□ -1.41
SMARCB1-207ENST00000491967 PVRIGQ6DKI7 326 aa6.23□□□□□ -1.41
SMARCB1-207ENST00000491967 LPCAT3Q6P1A2 487 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms